RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 RTN4RL1Q86UN2 441 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-203ENST00000343508 TSTD1Q8NFU3 115 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 NKX3-1Q99801 234 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-203ENST00000343508 VN1R3Q9BXE9 311 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 TMED7-TICAM2A0A0A6YYA0 188 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 B4DEV8 164 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 FGF2P09038 288 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 SLC25A1P53007 311 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 Q7L0L9 218 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 FAM24BQ8N5W8 94 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 ARRDC3Q96B67 414 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 TRMT61AQ96FX7 289 aaKnown RBP4.33□□□□□ -1.72
CSMD3-203ENST00000343508 CTSFQ9UBX1 484 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 TMED7Q9Y3B3 224 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 ELOA3CA0A087WX78 387 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-203ENST00000343508 YY2O15391 372 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 MBP02144 154 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 GP1BAP07359 652 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 PIGPP57054 158 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 GPX8Q8TED1 209 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 NXF5Q9H1B4 397 aaKnown RBP4.33□□□□□ -1.72
CSMD3-203ENST00000343508 TXNIPQ9H3M7 391 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 TMEM272A0A1B0GTI8 110 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 DPP4P27487 766 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 HTRA4P83105 476 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-203ENST00000343508 HTRA3P83110 453 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 COL13A1Q5TAT6 717 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-203ENST00000343508 LINC00346Q8IVM7 164 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 PRR18Q8N4B5 295 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 OR4D11Q8NGI4 311 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 NANOS1Q8WY41 292 aaKnown RBP4.33□□□□□ -1.72
CSMD3-203ENST00000343508 ZNF2Q9BSG1 426 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-203ENST00000343508 CABLES2Q9BTV7 478 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 PRDM7Q9NQW5 492 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 CA10Q9NS85 328 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 MIOXQ9UGB7 285 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 SF3B6Q9Y3B4 125 aaKnown RBP4.33□□□□□ -1.72
CSMD3-203ENST00000343508 H0YIG0 161 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 CXCL2P19875 107 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 MSX1P28360 303 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 OR2A2Q6IF42 318 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 DEGS2Q6QHC5 323 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 BTNL8Q6UX41 500 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 Q6ZSR6 202 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 LHFPL2Q6ZUX7 228 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 BCORP1Q8N888 145 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 SGK3Q96BR1 496 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 EDEM2Q9BV94 578 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 BCO1Q9HAY6 547 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 PCDHGA9Q9Y5G4 932 aaKnown RBP4.33□□□□□ -1.72
CSMD3-203ENST00000343508 NSG1A0A0A6YYJ2 146 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 HPXP02790 462 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 CTXN2P0C2S0 81 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 RD3LP0DJH9 198 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 ZFP62Q8NB50 900 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-203ENST00000343508 RPS4Y2Q8TD47 263 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 SIGLEC11Q96RL6 698 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 PARP11Q9NR21 331 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 A0A0U1RQK1 487 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 ARPC3O15145 178 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 HIST1H3AP68431 136 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 ENDOGQ14249 297 aaKnown RBP4.33□□□□□ -1.72
CSMD3-203ENST00000343508 C1orf140Q5VVS0 124 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 H1FNTQ75WM6 255 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-203ENST00000343508 TMEFF1Q8IYR6 380 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 OR5L1Q8NGL2 311 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 MSI2Q96DH6 328 aaKnown RBP4.33□□□□□ -1.72
CSMD3-203ENST00000343508 MPTX1A8MV57 137 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 GALR3O60755 368 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-203ENST00000343508 ZNF217O75362 1048 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 TCN2P20062 427 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 GGTLC2Q14390 218 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 ZNF77Q15935 545 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 DRAM2Q6UX65 266 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 PLXDC2Q6UX71 529 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 SHARPINQ9H0F6 387 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 PARP12Q9H0J9 701 aaKnown RBP4.33□□□□□ -1.72
CSMD3-203ENST00000343508 PLEKHF2Q9H8W4 249 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 FRRS1LQ9P0K9 344 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 OR7C1O76099 320 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-203ENST00000343508 ANKRD34CP0C6C1 535 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 SULT1A1P50225 295 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 PPP2CBP62714 309 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 PPP2CAP67775 309 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 OR11G2Q8NGC1 345 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 OR51A4Q8NGJ6 313 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 OR10J5Q8NHC4 309 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 HPSE2Q8WWQ2 592 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 SLAMF6Q96DU3 332 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 SLCO1C1Q9NYB5 712 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 TMEM184BQ9Y519 407 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-203ENST00000343508 LTBP4Q8N2S1 1624 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-203ENST00000343508 MDFIC2A0A1B0GVS7 189 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 TRAPPC2LH3BP13 241 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 BIDP55957 195 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 MFAP5Q13361 173 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 LBHQ53QV2 105 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-203ENST00000343508 IL1F10Q8WWZ1 152 aa4.33□□□□□ -1.72
CSMD3-203ENST00000343508 PP6455Q8WZ26 134 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms