RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 GPR176Q14439 515 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 SLC36A2Q495M3 483 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 TSPO2Q5TGU0 170 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 GLCCI1Q86VQ1 547 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 SLC7A6Q92536 515 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 SLCO5A1Q9H2Y9 848 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 CALHM2Q9HA72 323 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 EMC3Q9P0I2 261 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 SPRR3Q9UBC9 169 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 CNOT1A5YKK6 2376 aaKnown RBP17.55■□□□□ 0.4
RTN1-202ENST00000342503 LOC100289279A0A1B0GTE1 492 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 C5orf63A6NC05 138 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 TFECO14948 347 aaPredicted RBP17.55■□□□□ 0.4
RTN1-202ENST00000342503 FAM157BP0CG42 384 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 ZNF20P17024 532 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 CCL1P22362 96 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 HTR2CP28335 458 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 PTH2RP49190 550 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 EFNB2P52799 333 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 CD300CQ08708 224 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 GFOD2Q3B7J2 385 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 TMEM69Q5SWH9 247 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 GLYATL3Q5SZD4 288 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 MTFR2Q6P444 385 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 SLC22A24Q8N4F4 322 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 JAGN1Q8N5M9 183 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 NKAIN3Q8N8D7 197 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 OR1M1Q8NGA1 313 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 OR6M1Q8NGM8 313 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 SMIM4Q8WVI0 70 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 FAM71F1Q96KD3 344 aaPredicted RBP17.55■□□□□ 0.4
RTN1-202ENST00000342503 AUNIPQ9H7T9 357 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 ZDHHC11Q9H8X9 412 aa17.55■□□□□ 0.4
RTN1-202ENST00000342503 TMEM272A0A1B0GTI8 110 aa17.54■□□□□ 0.4
RTN1-202ENST00000342503 FAM240BA0A1B0GVZ2 78 aa17.54■□□□□ 0.4
RTN1-202ENST00000342503 SGCEO43556 437 aa17.54■□□□□ 0.4
RTN1-202ENST00000342503 KRT33AO76009 404 aa17.54■□□□□ 0.4
RTN1-202ENST00000342503 IGHV3-9P01782 118 aa17.54■□□□□ 0.4
RTN1-202ENST00000342503 DBHP09172 617 aa17.54■□□□□ 0.4
RTN1-202ENST00000342503 BDKRB2P30411 391 aa17.54■□□□□ 0.4
RTN1-202ENST00000342503 RANBP1P43487 201 aa17.54■□□□□ 0.4
RTN1-202ENST00000342503 SLC6A9P48067 706 aa17.54■□□□□ 0.4
RTN1-202ENST00000342503 TAS2R20P59543 309 aa17.54■□□□□ 0.4
RTN1-202ENST00000342503 RAB35Q15286 201 aa17.54■□□□□ 0.4
RTN1-202ENST00000342503 ZNF813Q6ZN06 617 aa17.54■□□□□ 0.4
RTN1-202ENST00000342503 DOK3Q7L591 496 aa17.54■□□□□ 0.4
RTN1-202ENST00000342503 CHMP1BQ7LBR1 199 aa17.54■□□□□ 0.4
RTN1-202ENST00000342503 LYPD6Q86Y78 171 aa17.54■□□□□ 0.4
RTN1-202ENST00000342503 DUSP18Q8NEJ0 188 aa17.54■□□□□ 0.4
RTN1-202ENST00000342503 WDYHV1Q96HA8 205 aa17.54■□□□□ 0.4
RTN1-202ENST00000342503 LINC00470Q9BZP3 86 aa17.54■□□□□ 0.4
RTN1-202ENST00000342503 PARPBPQ9NWS1 579 aa17.54■□□□□ 0.4
RTN1-202ENST00000342503 CACNG2Q9Y698 323 aa17.54■□□□□ 0.4
RTN1-202ENST00000342503 MUC6Q6W4X9 2439 aa17.53■□□□□ 0.4
RTN1-202ENST00000342503 LOC390937A0A1W2PQ73 354 aa17.53■□□□□ 0.4
RTN1-202ENST00000342503 ZNF724A8MTY0 619 aa17.53■□□□□ 0.4
RTN1-202ENST00000342503 SULT1B1O43704 296 aa17.53■□□□□ 0.4
RTN1-202ENST00000342503 PATE4P0C8F1 98 aa17.53■□□□□ 0.4
RTN1-202ENST00000342503 OTX1P32242 354 aaPredicted RBP17.53■□□□□ 0.4
RTN1-202ENST00000342503 MNDAP41218 407 aa17.53■□□□□ 0.4
RTN1-202ENST00000342503 C1orf100Q5SVJ3 147 aa17.53■□□□□ 0.4
RTN1-202ENST00000342503 ZNF774Q6NX45 483 aa17.53■□□□□ 0.4
RTN1-202ENST00000342503 ZNF529Q6P280 563 aa17.53■□□□□ 0.4
RTN1-202ENST00000342503 KRT74Q7RTS7 529 aa17.53■□□□□ 0.4
RTN1-202ENST00000342503 TOMM5Q8N4H5 51 aa17.53■□□□□ 0.4
RTN1-202ENST00000342503 OR5D14Q8NGL3 314 aa17.53■□□□□ 0.4
RTN1-202ENST00000342503 GCDHQ92947 438 aaPredicted RBP17.53■□□□□ 0.4
RTN1-202ENST00000342503 SPTSSAQ969W0 71 aa17.53■□□□□ 0.4
RTN1-202ENST00000342503 RNF122Q9H9V4 155 aa17.53■□□□□ 0.4
RTN1-202ENST00000342503 BCO1Q9HAY6 547 aa17.53■□□□□ 0.4
RTN1-202ENST00000342503 SLC17A5Q9NRA2 495 aa17.53■□□□□ 0.4
RTN1-202ENST00000342503 SLC7A10Q9NS82 523 aa17.53■□□□□ 0.4
RTN1-202ENST00000342503 NLKQ9UBE8 527 aa17.53■□□□□ 0.4
RTN1-202ENST00000342503 RHBDD3Q9Y3P4 386 aa17.53■□□□□ 0.4
RTN1-202ENST00000342503 DNAJC13O75165 2243 aa17.53■□□□□ 0.4
RTN1-202ENST00000342503 ZFHX2Q9C0A1 2572 aaPredicted RBP17.53■□□□□ 0.4
RTN1-202ENST00000342503 M0R135 149 aa17.52■□□□□ 0.4
RTN1-202ENST00000342503 SYNGR3O43761 229 aa17.52■□□□□ 0.4
RTN1-202ENST00000342503 IGLV3-1P01715 115 aa17.52■□□□□ 0.4
RTN1-202ENST00000342503 ABOP16442 354 aa17.52■□□□□ 0.4
RTN1-202ENST00000342503 ZNF32P17041 273 aa17.52■□□□□ 0.4
RTN1-202ENST00000342503 SCRN3Q0VDG4 424 aa17.52■□□□□ 0.4
RTN1-202ENST00000342503 ANKRD16Q6P6B7 361 aa17.52■□□□□ 0.4
RTN1-202ENST00000342503 SLC16A14Q7RTX9 510 aa17.52■□□□□ 0.4
RTN1-202ENST00000342503 BIVMQ86UB2 503 aa17.52■□□□□ 0.4
RTN1-202ENST00000342503 SIAH3Q8IW03 269 aa17.52■□□□□ 0.4
RTN1-202ENST00000342503 OR13C9Q8NGT0 318 aa17.52■□□□□ 0.4
RTN1-202ENST00000342503 HPS1Q92902 700 aa17.52■□□□□ 0.4
RTN1-202ENST00000342503 FOXRED1Q96CU9 486 aaPredicted RBP17.52■□□□□ 0.4
RTN1-202ENST00000342503 ZNF799Q96GE5 643 aa17.52■□□□□ 0.4
RTN1-202ENST00000342503 LYZL4Q96KX0 146 aa17.52■□□□□ 0.4
RTN1-202ENST00000342503 RNF121Q9H920 327 aa17.52■□□□□ 0.4
RTN1-202ENST00000342503 CTAG2O75638 210 aa17.52■□□□□ 0.39
RTN1-202ENST00000342503 APOC1P02654 83 aa17.52■□□□□ 0.39
RTN1-202ENST00000342503 CPN1P15169 458 aa17.52■□□□□ 0.39
RTN1-202ENST00000342503 RAB3AP20336 220 aa17.52■□□□□ 0.39
RTN1-202ENST00000342503 CRYGSP22914 178 aa17.52■□□□□ 0.39
RTN1-202ENST00000342503 RNPS1Q15287 305 aaKnown RBP17.52■□□□□ 0.39
RTN1-202ENST00000342503 AGAP6Q5VW22 663 aa17.52■□□□□ 0.39
RTN1-202ENST00000342503 PLET1Q6UQ28 207 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms