RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 SLC17A2O00624 439 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 ZNF354AO60765 605 aaPredicted RBP11.22□□□□□ -0.61
LMX1A-202ENST00000342310 GLAP06280 429 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 ASAH2BP0C7U1 165 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 BCKDHBP21953 392 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 CLDN6P56747 220 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 MANEAQ5SRI9 462 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 ZNF585AQ6P3V2 769 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 C8orf33Q9H7E9 229 aaPredicted RBP11.22□□□□□ -0.61
LMX1A-202ENST00000342310 HEXA-AS1Q9H8Q6 139 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 PLEK2Q9NYT0 353 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 LINC00862A6NCI5 91 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 H3BMH7 237 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 OR2T1O43869 369 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 GALP22466 123 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 BDKRB2P30411 391 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 CD96P40200 585 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 RNF4P78317 190 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 FAM122BQ7Z309 247 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 GTPBP8Q8N3Z3 284 aaPredicted RBP11.22□□□□□ -0.61
LMX1A-202ENST00000342310 ADAD2Q8NCV1 583 aaKnown RBP11.22□□□□□ -0.61
LMX1A-202ENST00000342310 SEH1LQ96EE3 360 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 AIFM2Q9BRQ8 373 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 ZNF426Q9BUY5 554 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 TXNIPQ9H3M7 391 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 ALKBH4Q9NXW9 302 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 R4GN57 208 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 SERPINA5P05154 406 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 SLC6A8P48029 635 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 RAB30Q15771 203 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 PLXDC2Q6UX71 529 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 Q7L0L9 218 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 GRINAQ7Z429 371 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 ADGRE4PQ86SQ3 457 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 SLC51BQ86UW2 128 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 SLC25A28Q96A46 364 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 FBXO17Q96EF6 278 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 ADAT3Q96EY9 351 aaPredicted RBP11.22□□□□□ -0.61
LMX1A-202ENST00000342310 CDCA3Q99618 268 aaPredicted RBP11.22□□□□□ -0.61
LMX1A-202ENST00000342310 C20orf24Q9BUV8 137 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 PIPOXQ9P0Z9 390 aa11.22□□□□□ -0.61
LMX1A-202ENST00000342310 CADP27708 2225 aa11.21□□□□□ -0.61
LMX1A-202ENST00000342310 SHOXO15266 292 aa11.21□□□□□ -0.61
LMX1A-202ENST00000342310 ZNF208O43345 1280 aa11.21□□□□□ -0.61
LMX1A-202ENST00000342310 TGM6O95932 706 aa11.21□□□□□ -0.61
LMX1A-202ENST00000342310 PNLIPP16233 465 aa11.21□□□□□ -0.61
LMX1A-202ENST00000342310 RAB3AP20336 220 aa11.21□□□□□ -0.61
LMX1A-202ENST00000342310 ASCL1P50553 236 aa11.21□□□□□ -0.61
LMX1A-202ENST00000342310 VASH2Q86V25 355 aa11.21□□□□□ -0.61
LMX1A-202ENST00000342310 TMEM104Q8NE00 496 aa11.21□□□□□ -0.61
LMX1A-202ENST00000342310 SCARF2Q96GP6 870 aaPredicted RBP11.21□□□□□ -0.61
LMX1A-202ENST00000342310 FBRSQ9HAH7 460 aa11.21□□□□□ -0.61
LMX1A-202ENST00000342310 EHFQ9NZC4 300 aa11.21□□□□□ -0.61
LMX1A-202ENST00000342310 RPS10-NUDT3A0A1W2PQS6 291 aa11.21□□□□□ -0.62
LMX1A-202ENST00000342310 STMND1H3BQB6 276 aa11.21□□□□□ -0.62
LMX1A-202ENST00000342310 BLVRBP30043 206 aaPredicted RBP11.21□□□□□ -0.62
LMX1A-202ENST00000342310 SERPINF1P36955 418 aa11.21□□□□□ -0.62
LMX1A-202ENST00000342310 SLC26A5P58743 744 aa11.21□□□□□ -0.62
LMX1A-202ENST00000342310 RPS4XP62701 263 aaKnown RBP11.21□□□□□ -0.62
LMX1A-202ENST00000342310 RIN1Q13671 783 aa11.21□□□□□ -0.62
LMX1A-202ENST00000342310 NKAIN1Q4KMZ8 207 aa11.21□□□□□ -0.62
LMX1A-202ENST00000342310 HACD4Q5VWC8 232 aa11.21□□□□□ -0.62
LMX1A-202ENST00000342310 H1FNTQ75WM6 255 aaPredicted RBP11.21□□□□□ -0.62
LMX1A-202ENST00000342310 SLC38A9Q8NBW4 561 aa11.21□□□□□ -0.62
LMX1A-202ENST00000342310 PXT1Q8NFP0 134 aa11.21□□□□□ -0.62
LMX1A-202ENST00000342310 OR5D14Q8NGL3 314 aa11.21□□□□□ -0.62
LMX1A-202ENST00000342310 ELP5Q8TE02 316 aa11.21□□□□□ -0.62
LMX1A-202ENST00000342310 PHB2Q99623 299 aa11.21□□□□□ -0.62
LMX1A-202ENST00000342310 EVA1AQ9H8M9 152 aa11.21□□□□□ -0.62
LMX1A-202ENST00000342310 SERINC1Q9NRX5 453 aa11.21□□□□□ -0.62
LMX1A-202ENST00000342310 MRPS28Q9Y2Q9 187 aaKnown RBP11.21□□□□□ -0.62
LMX1A-202ENST00000342310 PKDREJQ9NTG1 2253 aa11.21□□□□□ -0.62
LMX1A-202ENST00000342310 IGHV1OR15-9A0A0B4J2B8 117 aa11.21□□□□□ -0.62
LMX1A-202ENST00000342310 SOCS1O15524 211 aa11.21□□□□□ -0.62
LMX1A-202ENST00000342310 RAMP1O60894 148 aa11.21□□□□□ -0.62
LMX1A-202ENST00000342310 ZNF254O75437 659 aa11.21□□□□□ -0.62
LMX1A-202ENST00000342310 TIAF1O95411 115 aa11.21□□□□□ -0.62
LMX1A-202ENST00000342310 GUSBP08236 651 aa11.21□□□□□ -0.62
LMX1A-202ENST00000342310 NMBP08949 121 aa11.21□□□□□ -0.62
LMX1A-202ENST00000342310 NME2P22392 152 aa11.21□□□□□ -0.62
LMX1A-202ENST00000342310 LAP3P28838 519 aa11.21□□□□□ -0.62
LMX1A-202ENST00000342310 SGCBQ16585 318 aa11.21□□□□□ -0.62
LMX1A-202ENST00000342310 ATPAF1Q5TC12 328 aaPredicted RBP11.21□□□□□ -0.62
LMX1A-202ENST00000342310 TMPPEQ6ZT21 453 aa11.21□□□□□ -0.62
LMX1A-202ENST00000342310 ZSCAN1Q8NBB4 408 aa11.21□□□□□ -0.62
LMX1A-202ENST00000342310 OR2AE1Q8NHA4 323 aa11.21□□□□□ -0.62
LMX1A-202ENST00000342310 RAB3CQ96E17 227 aa11.21□□□□□ -0.62
LMX1A-202ENST00000342310 LAT2Q9GZY6 243 aa11.21□□□□□ -0.62
LMX1A-202ENST00000342310 A0A1B0GX78 115 aa11.2□□□□□ -0.62
LMX1A-202ENST00000342310 DDAH2O95865 285 aa11.2□□□□□ -0.62
LMX1A-202ENST00000342310 PRH1P02810 166 aa11.2□□□□□ -0.62
LMX1A-202ENST00000342310 CSTBP04080 98 aaKnown RBP11.2□□□□□ -0.62
LMX1A-202ENST00000342310 QDPRP09417 244 aa11.2□□□□□ -0.62
LMX1A-202ENST00000342310 FAHP16930 419 aa11.2□□□□□ -0.62
LMX1A-202ENST00000342310 OR3A4PP47883 348 aa11.2□□□□□ -0.62
LMX1A-202ENST00000342310 MYBPHQ13203 477 aa11.2□□□□□ -0.62
LMX1A-202ENST00000342310 SP6Q3SY56 376 aa11.2□□□□□ -0.62
LMX1A-202ENST00000342310 C15orf40Q8WUR7 153 aa11.2□□□□□ -0.62
LMX1A-202ENST00000342310 MARC2Q969Z3 335 aa11.2□□□□□ -0.62
LMX1A-202ENST00000342310 ZNF160Q9HCG1 818 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms