RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 PNLIPP16233 465 aa12.93□□□□□ -0.34
TDP2-201ENST00000341060 ZP3P21754 424 aa12.93□□□□□ -0.34
TDP2-201ENST00000341060 P2RY4P51582 365 aa12.93□□□□□ -0.34
TDP2-201ENST00000341060 EMP2P54851 167 aa12.93□□□□□ -0.34
TDP2-201ENST00000341060 DCDP81605 110 aaKnown RBP12.93□□□□□ -0.34
TDP2-201ENST00000341060 RNASE10Q5GAN6 216 aaKnown RBP12.93□□□□□ -0.34
TDP2-201ENST00000341060 CFAP77Q6ZQR2 320 aa12.93□□□□□ -0.34
TDP2-201ENST00000341060 RHOUQ7L0Q8 258 aa12.93□□□□□ -0.34
TDP2-201ENST00000341060 TRAPPC6BQ86SZ2 158 aa12.93□□□□□ -0.34
TDP2-201ENST00000341060 NOXO1Q8NFA2 376 aa12.93□□□□□ -0.34
TDP2-201ENST00000341060 OR5D14Q8NGL3 314 aa12.93□□□□□ -0.34
TDP2-201ENST00000341060 COQ8AQ8NI60 647 aa12.93□□□□□ -0.34
TDP2-201ENST00000341060 CXorf58Q96LI9 332 aa12.93□□□□□ -0.34
TDP2-201ENST00000341060 NUDT16L1Q9BRJ7 211 aaKnown RBP12.93□□□□□ -0.34
TDP2-201ENST00000341060 PTGES2Q9H7Z7 377 aa12.93□□□□□ -0.34
TDP2-201ENST00000341060 MOB1AQ9H8S9 216 aa12.93□□□□□ -0.34
TDP2-201ENST00000341060 SDHAF3Q9NRP4 125 aa12.93□□□□□ -0.34
TDP2-201ENST00000341060 FBLN5Q9UBX5 448 aa12.93□□□□□ -0.34
TDP2-201ENST00000341060 KCNMB2Q9Y691 235 aa12.93□□□□□ -0.34
TDP2-201ENST00000341060 LHFPL6Q9Y693 200 aa12.93□□□□□ -0.34
TDP2-201ENST00000341060 ZNF878C9JN71 531 aa12.92□□□□□ -0.34
TDP2-201ENST00000341060 IGHG1P01857 330 aa12.92□□□□□ -0.34
TDP2-201ENST00000341060 HLA-AP01891 365 aaKnown RBP12.92□□□□□ -0.34
TDP2-201ENST00000341060 RAB3AP20336 220 aa12.92□□□□□ -0.34
TDP2-201ENST00000341060 AGTR1P30556 359 aa12.92□□□□□ -0.34
TDP2-201ENST00000341060 CLRN1P58418 232 aa12.92□□□□□ -0.34
TDP2-201ENST00000341060 SRSF4Q08170 494 aaKnown RBP12.92□□□□□ -0.34
TDP2-201ENST00000341060 FGL1Q08830 312 aa12.92□□□□□ -0.34
TDP2-201ENST00000341060 CDNFQ49AH0 187 aa12.92□□□□□ -0.34
TDP2-201ENST00000341060 FAM69BQ5VUD6 431 aa12.92□□□□□ -0.34
TDP2-201ENST00000341060 ZNF385CQ66K41 422 aaPredicted RBP12.92□□□□□ -0.34
TDP2-201ENST00000341060 ZNF660Q6AZW8 331 aaPredicted RBP12.92□□□□□ -0.34
TDP2-201ENST00000341060 C17orf107Q6ZR85 190 aa12.92□□□□□ -0.34
TDP2-201ENST00000341060 CPEB2Q7Z5Q1 589 aaKnown RBP12.92□□□□□ -0.34
TDP2-201ENST00000341060 SLC51BQ86UW2 128 aa12.92□□□□□ -0.34
TDP2-201ENST00000341060 UBALD2Q8IYN6 164 aa12.92□□□□□ -0.34
TDP2-201ENST00000341060 BEST3Q8N1M1 668 aa12.92□□□□□ -0.34
TDP2-201ENST00000341060 OR10G3Q8NGC4 313 aa12.92□□□□□ -0.34
TDP2-201ENST00000341060 NECAB3Q96P71 396 aaPredicted RBP12.92□□□□□ -0.34
TDP2-201ENST00000341060 METTL7AQ9H8H3 244 aa12.92□□□□□ -0.34
TDP2-201ENST00000341060 FBXO4Q9UKT5 387 aa12.92□□□□□ -0.34
TDP2-201ENST00000341060 VSIG4Q9Y279 399 aa12.92□□□□□ -0.34
TDP2-201ENST00000341060 SLC5A6Q9Y289 635 aa12.92□□□□□ -0.34
TDP2-201ENST00000341060 TRAF3IP2O43734 574 aaPredicted RBP12.92□□□□□ -0.34
TDP2-201ENST00000341060 OR2J2O76002 312 aa12.92□□□□□ -0.34
TDP2-201ENST00000341060 GSK3AP49840 483 aa12.92□□□□□ -0.34
TDP2-201ENST00000341060 BAMBIQ13145 260 aa12.92□□□□□ -0.34
TDP2-201ENST00000341060 NKPD1Q17RQ9 610 aa12.92□□□□□ -0.34
TDP2-201ENST00000341060 CD163Q86VB7 1156 aa12.92□□□□□ -0.34
TDP2-201ENST00000341060 SLC38A6Q8IZM9 456 aa12.92□□□□□ -0.34
TDP2-201ENST00000341060 CMBLQ96DG6 245 aa12.92□□□□□ -0.34
TDP2-201ENST00000341060 SPSB2Q99619 263 aa12.92□□□□□ -0.34
TDP2-201ENST00000341060 C1QTNF6Q9BXI9 259 aa12.92□□□□□ -0.34
TDP2-201ENST00000341060 RARRES3Q9UL19 164 aa12.92□□□□□ -0.34
TDP2-201ENST00000341060 SIT1Q9Y3P8 196 aa12.92□□□□□ -0.34
TDP2-201ENST00000341060 SESN1Q9Y6P5 492 aa12.92□□□□□ -0.34
TDP2-201ENST00000341060 KIAA1549Q9HCM3 1950 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 POM121CA8CG34 1229 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 ZFAND5O76080 213 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 CSN2P05814 226 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 ERCC1P07992 297 aaPredicted RBP12.91□□□□□ -0.34
TDP2-201ENST00000341060 CD34P28906 385 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 CXADRP78310 365 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 SLC25A42Q86VD7 318 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 GVQW1Q8N7I0 195 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 ZDHHC22Q8N966 263 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 OR5M9Q8NGP3 310 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 OR13C9Q8NGT0 318 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 OR51E1Q8TCB6 317 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 MRGPRFQ96AM1 343 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 ZNF230Q9UIE0 474 aaPredicted RBP12.91□□□□□ -0.34
TDP2-201ENST00000341060 NOP16Q9Y3C1 178 aaKnown RBP12.91□□□□□ -0.34
TDP2-201ENST00000341060 NCOR1O75376 2440 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 MED12Q93074 2177 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 A0A1W2PQM1 296 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 OR5H14A6NHG9 310 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 TMEM14DPA8MWL7 114 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 ONECUT2O95948 504 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 PDGFBP01127 241 aaPredicted RBP12.91□□□□□ -0.34
TDP2-201ENST00000341060 ZBTB25P24278 435 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 ZNF93P35789 620 aaPredicted RBP12.91□□□□□ -0.34
TDP2-201ENST00000341060 AWAT2Q6E213 333 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 LIN54Q6MZP7 749 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 GUSBP11Q6P575 273 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 GLRX5Q86SX6 157 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 ZNF546Q86UE3 836 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 CHST4Q8NCG5 386 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 OR2M3Q8NG83 312 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 OR2AJ1Q8NGZ0 328 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 SLC22A8Q8TCC7 542 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 NUDCD2Q8WVJ2 157 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 TMEM185BQ9H7F4 350 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 SEC61A2Q9H9S3 476 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 PFDN2Q9UHV9 154 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 PLEKHA6Q9Y2H5 1048 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 POLR1DQ9Y2S0 133 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 SPEF1Q9Y4P9 236 aa12.91□□□□□ -0.34
TDP2-201ENST00000341060 TNRC6BQ9UPQ9 1833 aaKnown RBP12.9□□□□□ -0.34
TDP2-201ENST00000341060 A0A0D9SG52 128 aa12.9□□□□□ -0.34
TDP2-201ENST00000341060 LOC105371267A0A1B0GV96 52 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms