RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 ARHGAP40Q5TG30 622 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 CLEC18BQ6UXF7 455 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 HSD11B1LQ7Z5J1 315 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 FAM129CQ86XR2 697 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 ZNF610Q8N9Z0 462 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 TMEM229BQ8NBD8 167 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 CLEC18CQ8NCF0 446 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 OR1J1Q8NGS3 322 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 M1APQ8TC57 530 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 ADGRG7Q96K78 797 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 ARV1Q9H2C2 271 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 ZDHHC3Q9NYG2 299 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 P2RX2Q9UBL9 471 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 A6NNC1 897 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 PLPP1O14494 284 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 DVL1O14640 695 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 HLA-AP01891 365 aaKnown RBP4.99□□□□□ -1.61
CSDE1-202ENST00000339438 GTF2F2P13984 249 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 FABP4P15090 132 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 RBM34P42696 430 aaKnown RBP4.99□□□□□ -1.61
CSDE1-202ENST00000339438 LTBQ06643 244 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 TOMM34Q15785 309 aaPredicted RBP4.99□□□□□ -1.61
CSDE1-202ENST00000339438 ITPRIPL2Q3MIP1 535 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 PLEKHS1Q5SXH7 462 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 PARS2Q7L3T8 475 aaKnown RBP4.99□□□□□ -1.61
CSDE1-202ENST00000339438 DCXRQ7Z4W1 244 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 TMED4Q7Z7H5 227 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 VRK2Q86Y07 508 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 HSD17B11Q8NBQ5 300 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 ZNF740Q8NDX6 193 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 SEMA6DQ8NFY4 1073 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 OR14C36Q8NHC7 312 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 C15orf40Q8WUR7 153 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 FRZBQ92765 325 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 BSCL2Q96G97 398 aaPredicted RBP4.99□□□□□ -1.61
CSDE1-202ENST00000339438 ZNF764Q96H86 408 aaPredicted RBP4.99□□□□□ -1.61
CSDE1-202ENST00000339438 PACRGQ96M98 296 aaPredicted RBP4.99□□□□□ -1.61
CSDE1-202ENST00000339438 SYT4Q9H2B2 425 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 KLHL31Q9H511 634 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 PLEKHA2Q9HB19 425 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 FAM86C1Q9NVL1 165 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 TRPM6Q9BX84 2022 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 TRBV2A0A0J9YWF9 115 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 TMEM238LA0A1B0GVL6 79 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 TMEM210A6NLX4 147 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 K7ESM1 405 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 AGPAT2O15120 278 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 EFSO43281 561 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 CDC14BO60729 498 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 CA11O75493 328 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 GPANK1O95872 356 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 GYPBP06028 91 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 THBS1P07996 1170 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 TRGC1P0CF51 173 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 BSGP35613 385 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 AQP2P41181 271 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 SNRPNP63162 240 aaKnown RBP4.99□□□□□ -1.61
CSDE1-202ENST00000339438 PLAURQ03405 335 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 SLC9A5Q14940 896 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 TMEM35AQ53FP2 167 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 PDZD11Q5EBL8 140 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 METRNLQ641Q3 311 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 OR4C11Q6IEV9 310 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 INO80EQ8NBZ0 244 aaPredicted RBP4.99□□□□□ -1.61
CSDE1-202ENST00000339438 ADAD2Q8NCV1 583 aaKnown RBP4.99□□□□□ -1.61
CSDE1-202ENST00000339438 RNASE8Q8TDE3 154 aaKnown RBP4.99□□□□□ -1.61
CSDE1-202ENST00000339438 ZBTB8AQ96BR9 441 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 FOXRED1Q96CU9 486 aaPredicted RBP4.99□□□□□ -1.61
CSDE1-202ENST00000339438 S100A13Q99584 98 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 GPR174Q9BXC1 333 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 SIGLEC7Q9Y286 467 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 AMDHD2Q9Y303 409 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 TMED7Q9Y3B3 224 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 RHBDD3Q9Y3P4 386 aa4.99□□□□□ -1.61
CSDE1-202ENST00000339438 HEATR5AQ86XA9 2040 aa4.98□□□□□ -1.61
CSDE1-202ENST00000339438 TRBV5-7A0A0A0MS05 114 aa4.98□□□□□ -1.61
CSDE1-202ENST00000339438 ZNF587BE7ETH6 402 aa4.98□□□□□ -1.61
CSDE1-202ENST00000339438 M0QYG6 137 aa4.98□□□□□ -1.61
CSDE1-202ENST00000339438 TP53I11O14683 189 aa4.98□□□□□ -1.61
CSDE1-202ENST00000339438 LDLRAD4O15165 306 aa4.98□□□□□ -1.61
CSDE1-202ENST00000339438 CBR3O75828 277 aa4.98□□□□□ -1.61
CSDE1-202ENST00000339438 TRGC2P03986 189 aa4.98□□□□□ -1.61
CSDE1-202ENST00000339438 PCCBP05166 539 aa4.98□□□□□ -1.61
CSDE1-202ENST00000339438 PTNP21246 168 aa4.98□□□□□ -1.61
CSDE1-202ENST00000339438 EDNRAP25101 427 aa4.98□□□□□ -1.61
CSDE1-202ENST00000339438 DUSP2Q05923 314 aa4.98□□□□□ -1.61
CSDE1-202ENST00000339438 ST3GAL3Q11203 375 aa4.98□□□□□ -1.61
CSDE1-202ENST00000339438 SLC10A1Q14973 349 aa4.98□□□□□ -1.61
CSDE1-202ENST00000339438 ODF4Q2M2E3 257 aa4.98□□□□□ -1.61
CSDE1-202ENST00000339438 RPL7L1Q6DKI1 246 aaKnown RBP4.98□□□□□ -1.61
CSDE1-202ENST00000339438 MED27Q6P2C8 311 aa4.98□□□□□ -1.61
CSDE1-202ENST00000339438 MED25Q71SY5 747 aa4.98□□□□□ -1.61
CSDE1-202ENST00000339438 TRAPPC5Q8IUR0 188 aa4.98□□□□□ -1.61
CSDE1-202ENST00000339438 SLC35F3Q8IY50 421 aa4.98□□□□□ -1.61
CSDE1-202ENST00000339438 LILRA3Q8N6C8 439 aaPredicted RBP4.98□□□□□ -1.61
CSDE1-202ENST00000339438 PFN4Q8NHR9 129 aa4.98□□□□□ -1.61
CSDE1-202ENST00000339438 CCDC107Q8WV48 283 aa4.98□□□□□ -1.61
CSDE1-202ENST00000339438 RLN3Q8WXF3 142 aa4.98□□□□□ -1.61
CSDE1-202ENST00000339438 OR8D1Q8WZ84 308 aa4.98□□□□□ -1.61
CSDE1-202ENST00000339438 FAM3CQ92520 227 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms