RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 WISP1O95388 367 aa16.77■□□□□ 0.28
PSPC1-201ENST00000338910 CD74P04233 296 aa16.77■□□□□ 0.28
PSPC1-201ENST00000338910 ABOP16442 354 aa16.77■□□□□ 0.28
PSPC1-201ENST00000338910 PRKXP51817 358 aa16.77■□□□□ 0.28
PSPC1-201ENST00000338910 INO80EQ8NBZ0 244 aaPredicted RBP16.77■□□□□ 0.28
PSPC1-201ENST00000338910 PLPP5Q8NEB5 264 aa16.77■□□□□ 0.28
PSPC1-201ENST00000338910 THAP3Q8WTV1 239 aaPredicted RBP16.77■□□□□ 0.28
PSPC1-201ENST00000338910 CNTNAP3BQ96NU0 1288 aa16.77■□□□□ 0.28
PSPC1-201ENST00000338910 MBD2Q9UBB5 411 aa16.77■□□□□ 0.28
PSPC1-201ENST00000338910 EDARQ9UNE0 448 aa16.77■□□□□ 0.28
PSPC1-201ENST00000338910 SRPK3Q9UPE1 567 aa16.77■□□□□ 0.28
PSPC1-201ENST00000338910 NUDT19A8MXV4 375 aa16.77■□□□□ 0.27
PSPC1-201ENST00000338910 ZBTB25P24278 435 aa16.77■□□□□ 0.27
PSPC1-201ENST00000338910 KIR3DL2P43630 455 aa16.77■□□□□ 0.27
PSPC1-201ENST00000338910 LPAL2Q16609 132 aa16.77■□□□□ 0.27
PSPC1-201ENST00000338910 FAM209BQ5JX69 171 aa16.77■□□□□ 0.27
PSPC1-201ENST00000338910 JAZF1Q86VZ6 243 aa16.77■□□□□ 0.27
PSPC1-201ENST00000338910 SKA3Q8IX90 412 aa16.77■□□□□ 0.27
PSPC1-201ENST00000338910 OIT3Q8WWZ8 545 aa16.77■□□□□ 0.27
PSPC1-201ENST00000338910 LAMP5Q9UJQ1 280 aa16.77■□□□□ 0.27
PSPC1-201ENST00000338910 VSIG4Q9Y279 399 aa16.77■□□□□ 0.27
PSPC1-201ENST00000338910 PLEKHA6Q9Y2H5 1048 aa16.77■□□□□ 0.27
PSPC1-201ENST00000338910 TO15178 435 aa16.76■□□□□ 0.27
PSPC1-201ENST00000338910 ACY1Q03154 408 aa16.76■□□□□ 0.27
PSPC1-201ENST00000338910 NKAIN1Q4KMZ8 207 aa16.76■□□□□ 0.27
PSPC1-201ENST00000338910 TRIM61Q5EBN2 209 aa16.76■□□□□ 0.27
PSPC1-201ENST00000338910 BPIFB2Q8N4F0 458 aa16.76■□□□□ 0.27
PSPC1-201ENST00000338910 TMEM105Q8N8V8 129 aa16.76■□□□□ 0.27
PSPC1-201ENST00000338910 SLC30A7Q8NEW0 376 aa16.76■□□□□ 0.27
PSPC1-201ENST00000338910 NANPQ8TBE9 248 aa16.76■□□□□ 0.27
PSPC1-201ENST00000338910 TAAR8Q969N4 342 aa16.76■□□□□ 0.27
PSPC1-201ENST00000338910 C4orf45Q96LM5 186 aa16.76■□□□□ 0.27
PSPC1-201ENST00000338910 NKX3-1Q99801 234 aaPredicted RBP16.76■□□□□ 0.27
PSPC1-201ENST00000338910 SLC6A7Q99884 636 aa16.76■□□□□ 0.27
PSPC1-201ENST00000338910 ADAM19Q9H013 955 aa16.76■□□□□ 0.27
PSPC1-201ENST00000338910 ACKR4Q9NPB9 350 aa16.76■□□□□ 0.27
PSPC1-201ENST00000338910 TVP23AA6NH52 213 aa16.76■□□□□ 0.27
PSPC1-201ENST00000338910 ZNF736B4DX44 427 aaPredicted RBP16.76■□□□□ 0.27
PSPC1-201ENST00000338910 DOK2O60496 412 aa16.76■□□□□ 0.27
PSPC1-201ENST00000338910 SCRG1O75711 98 aa16.76■□□□□ 0.27
PSPC1-201ENST00000338910 CYB5AP00167 134 aa16.76■□□□□ 0.27
PSPC1-201ENST00000338910 LIPCP11150 499 aa16.76■□□□□ 0.27
PSPC1-201ENST00000338910 CTXN1P60606 82 aa16.76■□□□□ 0.27
PSPC1-201ENST00000338910 RASGEF1BQ0VAM2 473 aa16.76■□□□□ 0.27
PSPC1-201ENST00000338910 HYAL4Q2M3T9 481 aa16.76■□□□□ 0.27
PSPC1-201ENST00000338910 ALG10Q5BKT4 473 aa16.76■□□□□ 0.27
PSPC1-201ENST00000338910 C1QL3Q5VWW1 255 aa16.76■□□□□ 0.27
PSPC1-201ENST00000338910 PEAR1Q5VY43 1037 aaPredicted RBP16.76■□□□□ 0.27
PSPC1-201ENST00000338910 ASPHD2Q6ICH7 369 aa16.76■□□□□ 0.27
PSPC1-201ENST00000338910 LYG2Q86SG7 212 aa16.76■□□□□ 0.27
PSPC1-201ENST00000338910 PAQR4Q8N4S7 273 aaPredicted RBP16.76■□□□□ 0.27
PSPC1-201ENST00000338910 ZC3H10Q96K80 434 aaKnown RBP16.76■□□□□ 0.27
PSPC1-201ENST00000338910 CCDC74BQ96LY2 380 aa16.76■□□□□ 0.27
PSPC1-201ENST00000338910 CCNL2Q96S94 520 aaPredicted RBP16.76■□□□□ 0.27
PSPC1-201ENST00000338910 LPAR4Q99677 370 aa16.76■□□□□ 0.27
PSPC1-201ENST00000338910 CRB3Q9BUF7 120 aa16.76■□□□□ 0.27
PSPC1-201ENST00000338910 SLCO5A1Q9H2Y9 848 aa16.76■□□□□ 0.27
PSPC1-201ENST00000338910 UQCC1Q9NVA1 299 aa16.76■□□□□ 0.27
PSPC1-201ENST00000338910 HIF3AQ9Y2N7 669 aa16.76■□□□□ 0.27
PSPC1-201ENST00000338910 ALG1L2C9J202 215 aa16.75■□□□□ 0.27
PSPC1-201ENST00000338910 ALOX5APP20292 161 aa16.75■□□□□ 0.27
PSPC1-201ENST00000338910 CXCR1P25024 350 aa16.75■□□□□ 0.27
PSPC1-201ENST00000338910 CCKBRP32239 447 aa16.75■□□□□ 0.27
PSPC1-201ENST00000338910 PTGFRP43088 359 aa16.75■□□□□ 0.27
PSPC1-201ENST00000338910 SCGB2B2Q4G0G5 96 aa16.75■□□□□ 0.27
PSPC1-201ENST00000338910 RABEPKQ7Z6M1 372 aa16.75■□□□□ 0.27
PSPC1-201ENST00000338910 SLC25A42Q86VD7 318 aa16.75■□□□□ 0.27
PSPC1-201ENST00000338910 TSEN15Q8WW01 171 aaKnown RBP16.75■□□□□ 0.27
PSPC1-201ENST00000338910 DCBLD2Q96PD2 775 aa16.75■□□□□ 0.27
PSPC1-201ENST00000338910 MMP26Q9NRE1 261 aa16.75■□□□□ 0.27
PSPC1-201ENST00000338910 ZNF107Q9UII5 783 aaPredicted RBP16.75■□□□□ 0.27
PSPC1-201ENST00000338910 TTLL8A6PVC2 850 aa16.75■□□□□ 0.27
PSPC1-201ENST00000338910 KCNAB3O43448 404 aa16.75■□□□□ 0.27
PSPC1-201ENST00000338910 IL2RAP01589 272 aa16.75■□□□□ 0.27
PSPC1-201ENST00000338910 HEXBP07686 556 aa16.75■□□□□ 0.27
PSPC1-201ENST00000338910 ASAH2BP0C7U1 165 aa16.75■□□□□ 0.27
PSPC1-201ENST00000338910 SMIM6P0DI80 62 aa16.75■□□□□ 0.27
PSPC1-201ENST00000338910 TPT1P13693 172 aaKnown RBP16.75■□□□□ 0.27
PSPC1-201ENST00000338910 ZNF28P17035 718 aa16.75■□□□□ 0.27
PSPC1-201ENST00000338910 NFYBP25208 207 aa16.75■□□□□ 0.27
PSPC1-201ENST00000338910 SLC6A8P48029 635 aa16.75■□□□□ 0.27
PSPC1-201ENST00000338910 RNF4P78317 190 aa16.75■□□□□ 0.27
PSPC1-201ENST00000338910 EGR3Q06889 387 aa16.75■□□□□ 0.27
PSPC1-201ENST00000338910 OR7A5Q15622 319 aa16.75■□□□□ 0.27
PSPC1-201ENST00000338910 WDR38Q5JTN6 314 aa16.75■□□□□ 0.27
PSPC1-201ENST00000338910 ZNF627Q7L945 461 aa16.75■□□□□ 0.27
PSPC1-201ENST00000338910 ZNF441Q8N8Z8 693 aa16.75■□□□□ 0.27
PSPC1-201ENST00000338910 IFI44Q8TCB0 444 aa16.75■□□□□ 0.27
PSPC1-201ENST00000338910 MITD1Q8WV92 249 aa16.75■□□□□ 0.27
PSPC1-201ENST00000338910 RNF141Q8WVD5 230 aa16.75■□□□□ 0.27
PSPC1-201ENST00000338910 NAT6Q93015 286 aa16.75■□□□□ 0.27
PSPC1-201ENST00000338910 TMEM231Q9H6L2 316 aa16.75■□□□□ 0.27
PSPC1-201ENST00000338910 SRA1Q9HD15 236 aaKnown RBP16.75■□□□□ 0.27
PSPC1-201ENST00000338910 TREM1Q9NP99 234 aa16.75■□□□□ 0.27
PSPC1-201ENST00000338910 FARSAQ9Y285 508 aaKnown RBP16.75■□□□□ 0.27
PSPC1-201ENST00000338910 CACNA1CQ13936 2221 aa16.75■□□□□ 0.27
PSPC1-201ENST00000338910 ALPK2Q86TB3 2170 aa16.74■□□□□ 0.27
PSPC1-201ENST00000338910 FABP1P07148 127 aa16.74■□□□□ 0.27
PSPC1-201ENST00000338910 CD14P08571 375 aa16.74■□□□□ 0.27
PSPC1-201ENST00000338910 RPS27P42677 84 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms