RNA–Protein interactions for RNA: ENST00000338585.6

MCF2-201, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-201ENST00000338585 FAM180AQ6UWF9 173 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 TFAP2EQ6VUC0 442 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 ZNF704Q6ZNC4 412 aaPredicted RBP3.62□□□□□ -1.83
MCF2-201ENST00000338585 RHOUQ7L0Q8 258 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 FAM214BQ7L5A3 538 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 ABHD12BQ7Z5M8 362 aaPredicted RBP3.62□□□□□ -1.83
MCF2-201ENST00000338585 CD163Q86VB7 1156 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 COMMD2Q86X83 199 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 CPEB3Q8NE35 698 aaKnown RBP3.62□□□□□ -1.83
MCF2-201ENST00000338585 OR51A2Q8NGJ7 313 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 OR5H6Q8NGV6 325 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 OR1F12Q8NHA8 337 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 S100ZQ8WXG8 99 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 PHYHIPQ92561 330 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 AP3S1Q92572 193 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 ADAT3Q96EY9 351 aaPredicted RBP3.62□□□□□ -1.83
MCF2-201ENST00000338585 ZNF799Q96GE5 643 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 FAM71F1Q96KD3 344 aaPredicted RBP3.62□□□□□ -1.83
MCF2-201ENST00000338585 LYZL4Q96KX0 146 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 CEP19Q96LK0 163 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 WDR12Q9GZL7 423 aaKnown RBP3.62□□□□□ -1.83
MCF2-201ENST00000338585 HDHD2Q9H0R4 259 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 NIPAL2Q9H841 368 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 TCF7L1Q9HCS4 588 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 GPR84Q9NQS5 396 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 HHLA2Q9UM44 414 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 TIMM10BQ9Y5J6 103 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 FAM215AQ9Y5M1 114 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 V9GYH0 126 aa3.62□□□□□ -1.83
MCF2-201ENST00000338585 TLN1Q9Y490 2541 aaKnown RBP3.61□□□□□ -1.83
MCF2-201ENST00000338585 A0A1B0GVG6 124 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 A0A1W2PR80 420 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 MED19A0JLT2 244 aaPredicted RBP3.61□□□□□ -1.83
MCF2-201ENST00000338585 OR14I1A6ND48 311 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 OR6C6A6NF89 314 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 OR6C65A6NJZ3 312 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 IFITM5A6NNB3 132 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 AHRRA9YTQ3 701 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 TBX1O43435 398 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 SYT7O43581 403 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 FARS2O95363 451 aaKnown RBP3.61□□□□□ -1.83
MCF2-201ENST00000338585 EIF4EP06730 217 aaKnown RBP3.61□□□□□ -1.83
MCF2-201ENST00000338585 UBCP0CG48 685 aaKnown RBP3.61□□□□□ -1.83
MCF2-201ENST00000338585 CD79AP11912 226 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 CCL2P13500 99 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 ELK1P19419 428 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 IGHV1-2P23083 117 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 CTSSP25774 331 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 CD40LGP29965 261 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 UCNP55089 124 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 SCRN3Q0VDG4 424 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 ZNF79Q15937 498 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 DDI2Q5TDH0 399 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 TMEM244Q5VVB8 128 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 NSUN5P2Q63ZY6 315 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 C16orf87Q6PH81 154 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 CNIH2Q6PI25 160 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 UNQ6494/PRO21346Q6UXR6 183 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 LUZP2Q86TE4 346 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 SAMD12Q8N8I0 201 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 PLPP7Q8NBV4 271 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 NAXEQ8NCW5 288 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 OR1J2Q8NGS2 313 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 OR2AE1Q8NHA4 323 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 TRMT10AQ8TBZ6 339 aaKnown RBP3.61□□□□□ -1.83
MCF2-201ENST00000338585 SNRNP27Q8WVK2 155 aaKnown RBP3.61□□□□□ -1.83
MCF2-201ENST00000338585 ZCCHC14Q8WYQ9 949 aaKnown RBP3.61□□□□□ -1.83
MCF2-201ENST00000338585 FGGYQ96C11 551 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 PGAM5Q96HS1 289 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 DIRAS2Q96HU8 199 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 SDHCQ99643 169 aaPredicted RBP3.61□□□□□ -1.83
MCF2-201ENST00000338585 KCNK15Q9H427 330 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 RNF121Q9H920 327 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 GP6Q9HCN6 339 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 SLC17A5Q9NRA2 495 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 V9GY05 133 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 BSNQ9UPA5 3926 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 CACNA1AO00555 2505 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 LOC100509620A0A075B734 347 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 A0A1B0GVI7 797 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 ANXA2P2A6NMY6 339 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 RAD51DO75771 328 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 TNFSF13O75888 250 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 LYZL6O75951 148 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 RAF1P04049 648 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 IGFBP3P17936 291 aaPredicted RBP3.61□□□□□ -1.83
MCF2-201ENST00000338585 APEX1P27695 318 aaKnown RBP3.61□□□□□ -1.83
MCF2-201ENST00000338585 MPGP29372 298 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 ETV6P41212 452 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 TDGF1P3P51864 188 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 PPP5CP53041 499 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 PCBD1P61457 104 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 PPP3R1P63098 170 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 SPOCK1Q08629 439 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 PLA2G7Q13093 441 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 P2RY14Q15391 338 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 KRTAP27-1Q3LI81 207 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 SPANXN2Q5MJ10 180 aa3.61□□□□□ -1.83
MCF2-201ENST00000338585 NCCRP1Q6ZVX7 275 aaPredicted RBP3.61□□□□□ -1.83
MCF2-201ENST00000338585 ZNF627Q7L945 461 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms