RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 MS4A8Q9BY19 250 aa10.72□□□□□ -0.69
SHANK2-201ENST00000338508 UCK1Q9HA47 277 aa10.72□□□□□ -0.69
SHANK2-201ENST00000338508 B3GALT5Q9Y2C3 310 aa10.72□□□□□ -0.69
SHANK2-201ENST00000338508 CHST2Q9Y4C5 530 aa10.72□□□□□ -0.69
SHANK2-201ENST00000338508 CORINQ9Y5Q5 1042 aa10.72□□□□□ -0.69
SHANK2-201ENST00000338508 ZNF142P52746 1687 aaPredicted RBP10.72□□□□□ -0.69
SHANK2-201ENST00000338508 MN1Q10571 1320 aaPredicted RBP10.72□□□□□ -0.69
SHANK2-201ENST00000338508 IDSB3KWA1 339 aa10.72□□□□□ -0.69
SHANK2-201ENST00000338508 SBK2P0C263 348 aa10.72□□□□□ -0.69
SHANK2-201ENST00000338508 FABP4P15090 132 aa10.72□□□□□ -0.69
SHANK2-201ENST00000338508 CD40P25942 277 aa10.72□□□□□ -0.69
SHANK2-201ENST00000338508 FCGR2CP31995 323 aa10.72□□□□□ -0.69
SHANK2-201ENST00000338508 ECI1P42126 302 aa10.72□□□□□ -0.69
SHANK2-201ENST00000338508 REEP5Q00765 189 aa10.72□□□□□ -0.69
SHANK2-201ENST00000338508 ZDHHC23Q8IYP9 409 aa10.72□□□□□ -0.69
SHANK2-201ENST00000338508 BCORP1Q8N888 145 aa10.72□□□□□ -0.69
SHANK2-201ENST00000338508 LILRB1Q8NHL6 650 aaPredicted RBP10.72□□□□□ -0.69
SHANK2-201ENST00000338508 FBXO34Q9NWN3 711 aa10.72□□□□□ -0.69
SHANK2-201ENST00000338508 NDRG4Q9ULP0 352 aaKnown RBP10.72□□□□□ -0.69
SHANK2-201ENST00000338508 STRAPQ9Y3F4 350 aaKnown RBP10.72□□□□□ -0.69
SHANK2-201ENST00000338508 ETV7Q9Y603 341 aa10.72□□□□□ -0.69
SHANK2-201ENST00000338508 AUP1Q9Y679 476 aa10.72□□□□□ -0.69
SHANK2-201ENST00000338508 SHPRHQ149N8 1683 aa10.72□□□□□ -0.69
SHANK2-201ENST00000338508 SCG5P05408 212 aa10.71□□□□□ -0.69
SHANK2-201ENST00000338508 PMCHP20382 165 aa10.71□□□□□ -0.69
SHANK2-201ENST00000338508 OPRK1P41145 380 aa10.71□□□□□ -0.69
SHANK2-201ENST00000338508 NOVA1P51513 510 aaKnown RBP10.71□□□□□ -0.69
SHANK2-201ENST00000338508 CSNK1G2P78368 415 aa10.71□□□□□ -0.69
SHANK2-201ENST00000338508 OXA1LQ15070 435 aa10.71□□□□□ -0.69
SHANK2-201ENST00000338508 OR1J1Q8NGS3 322 aa10.71□□□□□ -0.69
SHANK2-201ENST00000338508 OR13C8Q8NGS7 320 aa10.71□□□□□ -0.69
SHANK2-201ENST00000338508 ICAM5Q9UMF0 924 aa10.71□□□□□ -0.69
SHANK2-201ENST00000338508 LOC107986453A0A1B0GWG9 222 aa10.71□□□□□ -0.69
SHANK2-201ENST00000338508 BMP5P22003 454 aa10.71□□□□□ -0.69
SHANK2-201ENST00000338508 AAMDCQ9H7C9 122 aa10.71□□□□□ -0.69
SHANK2-201ENST00000338508 MED29Q9NX70 200 aa10.71□□□□□ -0.69
SHANK2-201ENST00000338508 MMP7P09237 267 aaPredicted RBP10.71□□□□□ -0.69
SHANK2-201ENST00000338508 AKR1C3P42330 323 aa10.71□□□□□ -0.69
SHANK2-201ENST00000338508 ADPRHP54922 357 aa10.71□□□□□ -0.69
SHANK2-201ENST00000338508 NKAIN4Q8IVV8 208 aa10.71□□□□□ -0.69
SHANK2-201ENST00000338508 CMTM4Q8IZR5 234 aa10.71□□□□□ -0.69
SHANK2-201ENST00000338508 OPALINQ96PE5 141 aa10.71□□□□□ -0.69
SHANK2-201ENST00000338508 TXNIPQ9H3M7 391 aa10.71□□□□□ -0.69
SHANK2-201ENST00000338508 MOB1AQ9H8S9 216 aa10.71□□□□□ -0.69
SHANK2-201ENST00000338508 NIT2Q9NQR4 276 aa10.71□□□□□ -0.69
SHANK2-201ENST00000338508 UFC1Q9Y3C8 167 aa10.71□□□□□ -0.69
SHANK2-201ENST00000338508 ZNF638Q14966 1978 aaKnown RBP10.71□□□□□ -0.7
SHANK2-201ENST00000338508 ZNF716A6NP11 495 aa10.71□□□□□ -0.7
SHANK2-201ENST00000338508 FA2HQ7L5A8 372 aa10.71□□□□□ -0.7
SHANK2-201ENST00000338508 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.71□□□□□ -0.7
SHANK2-201ENST00000338508 NUDT8Q8WV74 236 aa10.71□□□□□ -0.7
SHANK2-201ENST00000338508 OR51I2Q9H344 312 aa10.71□□□□□ -0.7
SHANK2-201ENST00000338508 DOK5Q9P104 306 aa10.71□□□□□ -0.7
SHANK2-201ENST00000338508 ING1Q9UK53 422 aaPredicted RBP10.71□□□□□ -0.7
SHANK2-201ENST00000338508 KIR2DS1A0A191URI9 304 aa10.71□□□□□ -0.7
SHANK2-201ENST00000338508 OR2W5A6NFC9 320 aa10.71□□□□□ -0.7
SHANK2-201ENST00000338508 ANKUB1A6NFN9 424 aa10.71□□□□□ -0.7
SHANK2-201ENST00000338508 LRP3O75074 770 aa10.71□□□□□ -0.7
SHANK2-201ENST00000338508 HIST1H1CP16403 213 aaKnown RBP10.71□□□□□ -0.7
SHANK2-201ENST00000338508 KIR2DS4P43632 304 aa10.71□□□□□ -0.7
SHANK2-201ENST00000338508 KIR2DS1Q14954 304 aa10.71□□□□□ -0.7
SHANK2-201ENST00000338508 RPUSD3Q6P087 351 aaKnown RBP10.71□□□□□ -0.7
SHANK2-201ENST00000338508 OR13C5Q8NGS8 318 aa10.71□□□□□ -0.7
SHANK2-201ENST00000338508 AKR7LQ8NHP1 331 aa10.71□□□□□ -0.7
SHANK2-201ENST00000338508 TSLPQ969D9 159 aa10.71□□□□□ -0.7
SHANK2-201ENST00000338508 C11orf54Q9H0W9 315 aaPredicted RBP10.71□□□□□ -0.7
SHANK2-201ENST00000338508 CHD2O14647 1828 aaKnown RBP10.71□□□□□ -0.7
SHANK2-201ENST00000338508 SHISA8B8ZZ34 492 aa10.7□□□□□ -0.7
SHANK2-201ENST00000338508 ZNF354AO60765 605 aaPredicted RBP10.7□□□□□ -0.7
SHANK2-201ENST00000338508 MRPS14O60783 128 aaKnown RBP10.7□□□□□ -0.7
SHANK2-201ENST00000338508 PMS2P2O95744 297 aa10.7□□□□□ -0.7
SHANK2-201ENST00000338508 GYPAP02724 150 aa10.7□□□□□ -0.7
SHANK2-201ENST00000338508 ZDHHC11BP0C7U3 371 aa10.7□□□□□ -0.7
SHANK2-201ENST00000338508 PSMB2P49721 201 aa10.7□□□□□ -0.7
SHANK2-201ENST00000338508 TBCEQ15813 527 aaPredicted RBP10.7□□□□□ -0.7
SHANK2-201ENST00000338508 ZNF528Q3MIS6 628 aa10.7□□□□□ -0.7
SHANK2-201ENST00000338508 ZNF787Q6DD87 383 aa10.7□□□□□ -0.7
SHANK2-201ENST00000338508 SLC48A1Q6P1K1 146 aa10.7□□□□□ -0.7
SHANK2-201ENST00000338508 AP5S1Q9NUS5 200 aa10.7□□□□□ -0.7
SHANK2-201ENST00000338508 TRABD2BA6NFA1 517 aa10.7□□□□□ -0.7
SHANK2-201ENST00000338508 RFPL4AA6NLU0 287 aa10.7□□□□□ -0.7
SHANK2-201ENST00000338508 RFPL4AL1F8VTS6 287 aa10.7□□□□□ -0.7
SHANK2-201ENST00000338508 ABCD3P28288 659 aa10.7□□□□□ -0.7
SHANK2-201ENST00000338508 SIX1Q15475 284 aaPredicted RBP10.7□□□□□ -0.7
SHANK2-201ENST00000338508 SLC38A9Q8NBW4 561 aa10.7□□□□□ -0.7
SHANK2-201ENST00000338508 SLC7A6Q92536 515 aa10.7□□□□□ -0.7
SHANK2-201ENST00000338508 SARAFQ96BY9 339 aa10.7□□□□□ -0.7
SHANK2-201ENST00000338508 DHRS4Q9BTZ2 278 aa10.7□□□□□ -0.7
SHANK2-201ENST00000338508 HDAC8Q9BY41 377 aa10.7□□□□□ -0.7
SHANK2-201ENST00000338508 RP1P56715 2156 aa10.7□□□□□ -0.7
SHANK2-201ENST00000338508 ST8SIA3O43173 380 aa10.7□□□□□ -0.7
SHANK2-201ENST00000338508 HRO43593 1189 aa10.7□□□□□ -0.7
SHANK2-201ENST00000338508 AQP8O94778 261 aa10.7□□□□□ -0.7
SHANK2-201ENST00000338508 ADRA2CP18825 462 aa10.7□□□□□ -0.7
SHANK2-201ENST00000338508 PDZK1IP1Q13113 114 aa10.7□□□□□ -0.7
SHANK2-201ENST00000338508 OR2A1Q8NGT9 310 aa10.7□□□□□ -0.7
SHANK2-201ENST00000338508 LHX4Q969G2 390 aa10.7□□□□□ -0.7
SHANK2-201ENST00000338508 ATOH8Q96SQ7 321 aa10.7□□□□□ -0.7
SHANK2-201ENST00000338508 DLL4Q9NR61 685 aa10.7□□□□□ -0.7
SHANK2-201ENST00000338508 PCDHGA9Q9Y5G4 932 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms