RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 ZNF48Q96MX3 618 aaPredicted RBP11.2□□□□□ -0.62
NUDCD3-201ENST00000338427 TMEM246Q9BRR3 403 aa11.2□□□□□ -0.62
NUDCD3-201ENST00000338427 HDHD2Q9H0R4 259 aa11.2□□□□□ -0.62
NUDCD3-201ENST00000338427 UFSP2Q9NUQ7 469 aa11.2□□□□□ -0.62
NUDCD3-201ENST00000338427 INSIG2Q9Y5U4 225 aa11.2□□□□□ -0.62
NUDCD3-201ENST00000338427 LYVE1Q9Y5Y7 322 aa11.2□□□□□ -0.62
NUDCD3-201ENST00000338427 AUP1Q9Y679 476 aa11.2□□□□□ -0.62
NUDCD3-201ENST00000338427 TCRBV5S2A0A599 114 aa11.19□□□□□ -0.62
NUDCD3-201ENST00000338427 TMEM89A2RUT3 159 aa11.19□□□□□ -0.62
NUDCD3-201ENST00000338427 TRIM77I1YAP6 450 aa11.19□□□□□ -0.62
NUDCD3-201ENST00000338427 BHLHE40O14503 412 aa11.19□□□□□ -0.62
NUDCD3-201ENST00000338427 GYPBP06028 91 aa11.19□□□□□ -0.62
NUDCD3-201ENST00000338427 CLUP10909 449 aa11.19□□□□□ -0.62
NUDCD3-201ENST00000338427 MDH2P40926 338 aaKnown RBP11.19□□□□□ -0.62
NUDCD3-201ENST00000338427 TRAP1Q12931 704 aaKnown RBP11.19□□□□□ -0.62
NUDCD3-201ENST00000338427 SNAI3Q3KNW1 292 aa11.19□□□□□ -0.62
NUDCD3-201ENST00000338427 SLC36A3Q495N2 470 aa11.19□□□□□ -0.62
NUDCD3-201ENST00000338427 ZNF770Q6IQ21 691 aaPredicted RBP11.19□□□□□ -0.62
NUDCD3-201ENST00000338427 SLC27A4Q6P1M0 643 aa11.19□□□□□ -0.62
NUDCD3-201ENST00000338427 USP43Q70EL4 1123 aa11.19□□□□□ -0.62
NUDCD3-201ENST00000338427 SPATC1Q76KD6 591 aa11.19□□□□□ -0.62
NUDCD3-201ENST00000338427 SPICQ8N5J4 248 aa11.19□□□□□ -0.62
NUDCD3-201ENST00000338427 FITM2Q8N6M3 262 aa11.19□□□□□ -0.62
NUDCD3-201ENST00000338427 SLC37A3Q8NCC5 494 aa11.19□□□□□ -0.62
NUDCD3-201ENST00000338427 OR4Q3Q8NH05 313 aa11.19□□□□□ -0.62
NUDCD3-201ENST00000338427 OR2AE1Q8NHA4 323 aa11.19□□□□□ -0.62
NUDCD3-201ENST00000338427 FAM216AQ8WUB2 273 aa11.19□□□□□ -0.62
NUDCD3-201ENST00000338427 ATF6BQ99941 703 aa11.19□□□□□ -0.62
NUDCD3-201ENST00000338427 IDH3BO43837 385 aa11.18□□□□□ -0.62
NUDCD3-201ENST00000338427 IGHV4-38-2P0DP08 117 aa11.18□□□□□ -0.62
NUDCD3-201ENST00000338427 SLC2A1P11166 492 aa11.18□□□□□ -0.62
NUDCD3-201ENST00000338427 ZNF823P16415 610 aa11.18□□□□□ -0.62
NUDCD3-201ENST00000338427 CA6P23280 308 aa11.18□□□□□ -0.62
NUDCD3-201ENST00000338427 GATA3P23771 443 aa11.18□□□□□ -0.62
NUDCD3-201ENST00000338427 IFNGR2P38484 337 aa11.18□□□□□ -0.62
NUDCD3-201ENST00000338427 SRP9P49458 86 aaKnown RBP11.18□□□□□ -0.62
NUDCD3-201ENST00000338427 PRKXP51817 358 aa11.18□□□□□ -0.62
NUDCD3-201ENST00000338427 PAX2Q02962 417 aa11.18□□□□□ -0.62
NUDCD3-201ENST00000338427 ZNF92Q03936 586 aa11.18□□□□□ -0.62
NUDCD3-201ENST00000338427 PAX8Q06710 450 aa11.18□□□□□ -0.62
NUDCD3-201ENST00000338427 POU4F2Q12837 409 aa11.18□□□□□ -0.62
NUDCD3-201ENST00000338427 C16orf89Q6UX73 402 aa11.18□□□□□ -0.62
NUDCD3-201ENST00000338427 KLBQ86Z14 1044 aa11.18□□□□□ -0.62
NUDCD3-201ENST00000338427 BOLLQ8N9W6 283 aaKnown RBP11.18□□□□□ -0.62
NUDCD3-201ENST00000338427 PROKR2Q8NFJ6 384 aa11.18□□□□□ -0.62
NUDCD3-201ENST00000338427 ZFAND2BQ8WV99 257 aa11.18□□□□□ -0.62
NUDCD3-201ENST00000338427 NSL1Q96IY1 281 aa11.18□□□□□ -0.62
NUDCD3-201ENST00000338427 C1orf147Q96MC9 270 aaPredicted RBP11.18□□□□□ -0.62
NUDCD3-201ENST00000338427 SUCNR1Q9BXA5 334 aa11.18□□□□□ -0.62
NUDCD3-201ENST00000338427 TSSK6Q9BXA6 273 aa11.18□□□□□ -0.62
NUDCD3-201ENST00000338427 HCAR1Q9BXC0 346 aa11.18□□□□□ -0.62
NUDCD3-201ENST00000338427 MED20Q9H944 212 aa11.18□□□□□ -0.62
NUDCD3-201ENST00000338427 CENPMQ9NSP4 180 aa11.18□□□□□ -0.62
NUDCD3-201ENST00000338427 ATPIF1Q9UII2 106 aa11.18□□□□□ -0.62
NUDCD3-201ENST00000338427 POLR3KQ9Y2Y1 108 aaPredicted RBP11.18□□□□□ -0.62
NUDCD3-201ENST00000338427 CDH10Q9Y6N8 788 aa11.18□□□□□ -0.62
NUDCD3-201ENST00000338427 U3KQV3 271 aa11.18□□□□□ -0.62
NUDCD3-201ENST00000338427 PPIAL4EA0A075B759 164 aa11.17□□□□□ -0.62
NUDCD3-201ENST00000338427 PPIAL4CA0A0B4J2A2 164 aa11.17□□□□□ -0.62
NUDCD3-201ENST00000338427 PPIAL4DF5H284 164 aa11.17□□□□□ -0.62
NUDCD3-201ENST00000338427 C3orf80F5H4A9 247 aa11.17□□□□□ -0.62
NUDCD3-201ENST00000338427 ZNF593O00488 134 aaPredicted RBP11.17□□□□□ -0.62
NUDCD3-201ENST00000338427 FAM20BO75063 409 aa11.17□□□□□ -0.62
NUDCD3-201ENST00000338427 CCNB2O95067 398 aa11.17□□□□□ -0.62
NUDCD3-201ENST00000338427 SOX14O95416 240 aa11.17□□□□□ -0.62
NUDCD3-201ENST00000338427 PPIAL4FP0DN26 164 aa11.17□□□□□ -0.62
NUDCD3-201ENST00000338427 T-ENOLP0DO92 83 aa11.17□□□□□ -0.62
NUDCD3-201ENST00000338427 FPR2P25090 351 aa11.17□□□□□ -0.62
NUDCD3-201ENST00000338427 TPTEP56180 551 aa11.17□□□□□ -0.62
NUDCD3-201ENST00000338427 UBA52P62987 128 aaKnown RBP11.17□□□□□ -0.62
NUDCD3-201ENST00000338427 CRMP1Q14194 572 aa11.17□□□□□ -0.62
NUDCD3-201ENST00000338427 ESCO2Q56NI9 601 aa11.17□□□□□ -0.62
NUDCD3-201ENST00000338427 SFRP4Q6FHJ7 346 aaPredicted RBP11.17□□□□□ -0.62
NUDCD3-201ENST00000338427 PGM2L1Q6PCE3 622 aa11.17□□□□□ -0.62
NUDCD3-201ENST00000338427 PGAP1Q75T13 922 aa11.17□□□□□ -0.62
NUDCD3-201ENST00000338427 DCXRQ7Z4W1 244 aa11.17□□□□□ -0.62
NUDCD3-201ENST00000338427 AQP11Q8NBQ7 271 aa11.17□□□□□ -0.62
NUDCD3-201ENST00000338427 CLPTM1LQ96KA5 538 aa11.17□□□□□ -0.62
NUDCD3-201ENST00000338427 RASSF4Q9H2L5 321 aa11.17□□□□□ -0.62
NUDCD3-201ENST00000338427 PPP1R3EQ9H7J1 279 aa11.17□□□□□ -0.62
NUDCD3-201ENST00000338427 ARMC1Q9NVT9 282 aa11.17□□□□□ -0.62
NUDCD3-201ENST00000338427 IL20Q9NYY1 176 aa11.17□□□□□ -0.62
NUDCD3-201ENST00000338427 ACTR3BQ9P1U1 418 aa11.17□□□□□ -0.62
NUDCD3-201ENST00000338427 NUP50Q9UKX7 468 aa11.17□□□□□ -0.62
NUDCD3-201ENST00000338427 DOCK11Q5JSL3 2073 aa11.16□□□□□ -0.62
NUDCD3-201ENST00000338427 A0A1B0GWJ7 208 aa11.16□□□□□ -0.62
NUDCD3-201ENST00000338427 CD300LBA8K4G0 201 aa11.16□□□□□ -0.62
NUDCD3-201ENST00000338427 J3QW42 95 aa11.16□□□□□ -0.62
NUDCD3-201ENST00000338427 M0R135 149 aa11.16□□□□□ -0.62
NUDCD3-201ENST00000338427 KRT36O76013 467 aa11.16□□□□□ -0.62
NUDCD3-201ENST00000338427 RPS2P15880 293 aaKnown RBP11.16□□□□□ -0.62
NUDCD3-201ENST00000338427 EGR1P18146 543 aa11.16□□□□□ -0.62
NUDCD3-201ENST00000338427 ELF3P78545 371 aaPredicted RBP11.16□□□□□ -0.62
NUDCD3-201ENST00000338427 ECH1Q13011 328 aa11.16□□□□□ -0.62
NUDCD3-201ENST00000338427 SCGB2A2Q13296 93 aa11.16□□□□□ -0.62
NUDCD3-201ENST00000338427 TUSC1Q2TAM9 212 aa11.16□□□□□ -0.62
NUDCD3-201ENST00000338427 ARMCX4Q5H9R4 360 aa11.16□□□□□ -0.62
NUDCD3-201ENST00000338427 GLYATL3Q5SZD4 288 aa11.16□□□□□ -0.62
NUDCD3-201ENST00000338427 ZNF826PQ6ZT77 177 aa11.16□□□□□ -0.62
NUDCD3-201ENST00000338427 RASSF6Q6ZTQ3 369 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms