RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 HAVCR1Q96D42 359 aa10.24□□□□□ -0.77
SPTLC1-202ENST00000337841 CMBLQ96DG6 245 aa10.24□□□□□ -0.77
SPTLC1-202ENST00000337841 MARS2Q96GW9 593 aaKnown RBP10.24□□□□□ -0.77
SPTLC1-202ENST00000337841 PGAM5Q96HS1 289 aa10.24□□□□□ -0.77
SPTLC1-202ENST00000337841 DOK1Q99704 481 aa10.24□□□□□ -0.77
SPTLC1-202ENST00000337841 TRAF4Q9BUZ4 470 aaPredicted RBP10.24□□□□□ -0.77
SPTLC1-202ENST00000337841 ANKRD60Q9BZ19 345 aa10.24□□□□□ -0.77
SPTLC1-202ENST00000337841 OR2J1Q9GZK6 312 aa10.24□□□□□ -0.77
SPTLC1-202ENST00000337841 OR10A2Q9H208 303 aa10.24□□□□□ -0.77
SPTLC1-202ENST00000337841 CXorf56Q9H5V9 222 aa10.24□□□□□ -0.77
SPTLC1-202ENST00000337841 FGF20Q9NP95 211 aaPredicted RBP10.24□□□□□ -0.77
SPTLC1-202ENST00000337841 PLEKHA6Q9Y2H5 1048 aa10.24□□□□□ -0.77
SPTLC1-202ENST00000337841 LRP12Q9Y561 859 aa10.24□□□□□ -0.77
SPTLC1-202ENST00000337841 TMEM269A0A1B0GVZ9 245 aa10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 A0A1W2PPW3 197 aa10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 TMEM129A0AVI4 362 aa10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 C3orf80F5H4A9 247 aa10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 PSMD9O00233 223 aa10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 TBX1O43435 398 aa10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 CD8AP01732 235 aa10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 IGHV3-13P01766 116 aa10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 MT-ND5P03915 603 aa10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 RAC2P15153 192 aa10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 SELEP16581 610 aa10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 CD53P19397 219 aa10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 ZNF121P58317 390 aaPredicted RBP10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 ERVS71-1P61550 626 aa10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 ZNF85Q03923 595 aa10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 SWI5Q1ZZU3 235 aa10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 MST1LQ2TV78 715 aa10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 ZNF829Q3KNS6 432 aaPredicted RBP10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 SPATA46Q5T0L3 261 aa10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 MBNL2Q5VZF2 373 aaKnown RBP10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 FAM57BQ71RH2 274 aa10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 FAM220AQ7Z4H9 259 aa10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 CDH24Q86UP0 819 aa10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 LHFPL3Q86UP9 236 aa10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 GGHQ92820 318 aa10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 TRMT61AQ96FX7 289 aaKnown RBP10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 TMEM80Q96HE8 168 aa10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 SYT3Q9BQG1 590 aa10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 MRPL37Q9BZE1 423 aaKnown RBP10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 MS4A5Q9H3V2 200 aa10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 BRD7Q9NPI1 651 aa10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 PTTG3PQ9NZH4 202 aa10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 CNOT2Q9NZN8 540 aaKnown RBP10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 TAAR3PQ9P1P4 343 aa10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 MRM2Q9UI43 246 aaKnown RBP10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 FZR1Q9UM11 496 aa10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 MYRFQ9Y2G1 1151 aa10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 ABCA4P78363 2273 aa10.23□□□□□ -0.77
SPTLC1-202ENST00000337841 MAGEB4O15481 346 aaPredicted RBP10.22□□□□□ -0.77
SPTLC1-202ENST00000337841 XRCC2O43543 280 aa10.22□□□□□ -0.77
SPTLC1-202ENST00000337841 DENRO43583 198 aaKnown RBP10.22□□□□□ -0.77
SPTLC1-202ENST00000337841 CLPTM1O96005 669 aa10.22□□□□□ -0.77
SPTLC1-202ENST00000337841 ERCC1P07992 297 aaPredicted RBP10.22□□□□□ -0.77
SPTLC1-202ENST00000337841 SLC2A1P11166 492 aa10.22□□□□□ -0.77
SPTLC1-202ENST00000337841 MYL12AP19105 171 aa10.22□□□□□ -0.77
SPTLC1-202ENST00000337841 CFL1P23528 166 aaKnown RBP10.22□□□□□ -0.77
SPTLC1-202ENST00000337841 LIPAP38571 399 aa10.22□□□□□ -0.77
SPTLC1-202ENST00000337841 MMP16P51512 607 aa10.22□□□□□ -0.77
SPTLC1-202ENST00000337841 ACTA2P62736 377 aa10.22□□□□□ -0.77
SPTLC1-202ENST00000337841 ACTG2P63267 376 aa10.22□□□□□ -0.77
SPTLC1-202ENST00000337841 ST3GAL4Q11206 333 aa10.22□□□□□ -0.77
SPTLC1-202ENST00000337841 GALEQ14376 348 aa10.22□□□□□ -0.77
SPTLC1-202ENST00000337841 TIGD6Q17RP2 521 aa10.22□□□□□ -0.77
SPTLC1-202ENST00000337841 NKPD1Q17RQ9 610 aa10.22□□□□□ -0.77
SPTLC1-202ENST00000337841 FBXW12Q6X9E4 464 aa10.22□□□□□ -0.77
SPTLC1-202ENST00000337841 PGAP1Q75T13 922 aa10.22□□□□□ -0.77
SPTLC1-202ENST00000337841 MRPL21Q7Z2W9 205 aaKnown RBP10.22□□□□□ -0.77
SPTLC1-202ENST00000337841 LRP11Q86VZ4 500 aa10.22□□□□□ -0.77
SPTLC1-202ENST00000337841 STX19Q8N4C7 294 aa10.22□□□□□ -0.77
SPTLC1-202ENST00000337841 ZNF540Q8NDQ6 660 aa10.22□□□□□ -0.77
SPTLC1-202ENST00000337841 MYDGFQ969H8 173 aa10.22□□□□□ -0.77
SPTLC1-202ENST00000337841 CNBD2Q96M20 576 aa10.22□□□□□ -0.77
SPTLC1-202ENST00000337841 TTTY10Q9BZA0 68 aa10.22□□□□□ -0.77
SPTLC1-202ENST00000337841 RGCCQ9H4X1 137 aa10.22□□□□□ -0.77
SPTLC1-202ENST00000337841 DYNLRB1Q9NP97 96 aa10.22□□□□□ -0.77
SPTLC1-202ENST00000337841 CYSLTR2Q9NS75 346 aa10.22□□□□□ -0.77
SPTLC1-202ENST00000337841 BEX4Q9NWD9 120 aaPredicted RBP10.22□□□□□ -0.77
SPTLC1-202ENST00000337841 PSORS1C1Q9UIG5 152 aa10.22□□□□□ -0.77
SPTLC1-202ENST00000337841 GNG8Q9UK08 70 aa10.22□□□□□ -0.77
SPTLC1-202ENST00000337841 EXOSC1Q9Y3B2 195 aaKnown RBP10.22□□□□□ -0.77
SPTLC1-202ENST00000337841 TPRKBQ9Y3C4 175 aa10.22□□□□□ -0.77
SPTLC1-202ENST00000337841 CADP27708 2225 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 IGLV3-9A0A075B6K5 115 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 PLSCR5A0PG75 271 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 PTGES3LE9PB15 166 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 LOC110117498-PIK3R3F6TDL0 507 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 J3QLW9 94 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 M0R233 179 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 OVOL3O00110 214 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 XPNPEP2O43895 674 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 TIMM8AO60220 97 aaPredicted RBP10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 RPP14O95059 124 aaKnown RBP10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 IGHA1P01876 353 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 PIPP12273 146 aaPredicted RBP10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 ZNF19P17023 458 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 MPV17P39210 176 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 PSMA6P60900 246 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms