RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 HOXC5Q00444 222 aa11.15□□□□□ -0.62
FN1-202ENST00000336916 PMPCAQ10713 525 aa11.15□□□□□ -0.62
FN1-202ENST00000336916 SYT9Q86SS6 491 aa11.15□□□□□ -0.62
FN1-202ENST00000336916 MEX3DQ86XN8 651 aaKnown RBP11.15□□□□□ -0.62
FN1-202ENST00000336916 OR2V1Q8NHB1 315 aa11.15□□□□□ -0.62
FN1-202ENST00000336916 BCL7CQ8WUZ0 217 aaPredicted RBP11.15□□□□□ -0.62
FN1-202ENST00000336916 HRH4Q9H3N8 390 aa11.15□□□□□ -0.62
FN1-202ENST00000336916 MED20Q9H944 212 aa11.15□□□□□ -0.62
FN1-202ENST00000336916 FAM53CQ9NYF3 392 aa11.15□□□□□ -0.62
FN1-202ENST00000336916 P2RY10O00398 339 aa11.15□□□□□ -0.62
FN1-202ENST00000336916 CD276Q5ZPR3 534 aa11.15□□□□□ -0.62
FN1-202ENST00000336916 PTOV1Q86YD1 416 aa11.15□□□□□ -0.62
FN1-202ENST00000336916 SLC38A6Q8IZM9 456 aa11.15□□□□□ -0.62
FN1-202ENST00000336916 DYNC2LI1Q8TCX1 351 aa11.15□□□□□ -0.62
FN1-202ENST00000336916 SPSB1Q96BD6 273 aa11.15□□□□□ -0.62
FN1-202ENST00000336916 CHST6Q9GZX3 395 aa11.15□□□□□ -0.62
FN1-202ENST00000336916 GABARAPL1Q9H0R8 117 aa11.15□□□□□ -0.62
FN1-202ENST00000336916 PIGMQ9H3S5 423 aa11.15□□□□□ -0.62
FN1-202ENST00000336916 SEBOXQ9HB31 216 aaPredicted RBP11.15□□□□□ -0.62
FN1-202ENST00000336916 CEP192Q8TEP8 1941 aa11.15□□□□□ -0.62
FN1-202ENST00000336916 TRGV8A0A0C4DH27 118 aa11.15□□□□□ -0.62
FN1-202ENST00000336916 TGOLN2O43493 480 aa11.15□□□□□ -0.62
FN1-202ENST00000336916 SORBS2O94875 1100 aaKnown RBP11.15□□□□□ -0.62
FN1-202ENST00000336916 SLC6A12P48065 614 aa11.15□□□□□ -0.62
FN1-202ENST00000336916 HIST2H3PS2Q5TEC6 136 aa11.15□□□□□ -0.62
FN1-202ENST00000336916 GABRG1Q8N1C3 465 aa11.15□□□□□ -0.62
FN1-202ENST00000336916 ZNF705FA8MVS1 300 aaPredicted RBP11.15□□□□□ -0.62
FN1-202ENST00000336916 DVL1O14640 695 aa11.15□□□□□ -0.62
FN1-202ENST00000336916 TNFSF11O14788 317 aa11.15□□□□□ -0.62
FN1-202ENST00000336916 OR10J4P0C629 311 aa11.15□□□□□ -0.62
FN1-202ENST00000336916 ZNF705DP0CH99 300 aaPredicted RBP11.15□□□□□ -0.62
FN1-202ENST00000336916 ZNF705BP0CI00 300 aaPredicted RBP11.15□□□□□ -0.62
FN1-202ENST00000336916 DVL1P1P54792 670 aaPredicted RBP11.15□□□□□ -0.62
FN1-202ENST00000336916 RETREG3Q86VR2 466 aa11.15□□□□□ -0.62
FN1-202ENST00000336916 SLC23A1Q9UHI7 598 aa11.15□□□□□ -0.62
FN1-202ENST00000336916 HMGN4O00479 90 aa11.15□□□□□ -0.62
FN1-202ENST00000336916 ORM1P02763 201 aa11.15□□□□□ -0.62
FN1-202ENST00000336916 OPN1LWP04000 364 aa11.15□□□□□ -0.62
FN1-202ENST00000336916 ANKRD34CP0C6C1 535 aa11.15□□□□□ -0.62
FN1-202ENST00000336916 PRRX1P54821 245 aa11.15□□□□□ -0.62
FN1-202ENST00000336916 YRDCQ86U90 279 aaKnown RBP11.15□□□□□ -0.62
FN1-202ENST00000336916 DTWD2Q8NBA8 298 aa11.15□□□□□ -0.62
FN1-202ENST00000336916 TMEM202A6NGA9 273 aa11.15□□□□□ -0.63
FN1-202ENST00000336916 SPP1P10451 314 aa11.15□□□□□ -0.63
FN1-202ENST00000336916 CCR9P51686 369 aa11.15□□□□□ -0.63
FN1-202ENST00000336916 PCK2Q16822 640 aa11.15□□□□□ -0.63
FN1-202ENST00000336916 ZNF485Q8NCK3 441 aa11.15□□□□□ -0.63
FN1-202ENST00000336916 FBXO27Q8NI29 283 aa11.15□□□□□ -0.63
FN1-202ENST00000336916 GPX8Q8TED1 209 aa11.15□□□□□ -0.63
FN1-202ENST00000336916 ZNF486Q96H40 463 aaPredicted RBP11.15□□□□□ -0.63
FN1-202ENST00000336916 J3KTA2 159 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 FADS1O60427 444 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 PIAS2O75928 621 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 GALP22466 123 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 OR2T6Q8NHC8 308 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 NSG2Q9Y328 171 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 STRAPQ9Y3F4 350 aaKnown RBP11.14□□□□□ -0.63
FN1-202ENST00000336916 A0A1W2PR48 441 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 IRS1P35568 1242 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 NKX2-1P43699 371 aaPredicted RBP11.14□□□□□ -0.63
FN1-202ENST00000336916 LINC00346Q8IVM7 164 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 C3orf49Q96BT1 292 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 ASH2LQ9UBL3 628 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 SNX11Q9Y5W9 270 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 B3GALNT1O75752 331 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 OR2F2O95006 317 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 PGGT1BP53609 377 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 OR2F1Q13607 317 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 COX20Q5RI15 118 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 ACTR3CQ9C0K3 210 aaPredicted RBP11.14□□□□□ -0.63
FN1-202ENST00000336916 ZNF331Q9NQX6 463 aaPredicted RBP11.14□□□□□ -0.63
FN1-202ENST00000336916 TMEM131Q92545 1883 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.14□□□□□ -0.63
FN1-202ENST00000336916 WDR74Q6RFH5 385 aaPredicted RBP11.14□□□□□ -0.63
FN1-202ENST00000336916 WFDC8Q8IUA0 241 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 CDH26Q8IXH8 852 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 KCNE1BA0A087WTH5 132 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 HSD17B6O14756 317 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 OR2J2O76002 312 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 GCSHP23434 173 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 BTNL8Q6UX41 500 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 TMEM56Q96MV1 263 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 SLC17A5Q9NRA2 495 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 FUT7Q11130 342 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 HLA-BQ31612 363 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 THNSL2Q86YJ6 484 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 C16orf52Q8NHV5 167 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 AAMDCQ9H7C9 122 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 SLCO1B1Q9Y6L6 691 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 MN1Q10571 1320 aaPredicted RBP11.14□□□□□ -0.63
FN1-202ENST00000336916 K7ESM1 405 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 PAX6P26367 422 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 RNF4P78317 190 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 OR1M1Q8NGA1 313 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 RASD2Q96D21 266 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 PELI1Q96FA3 418 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 GABARAPL3Q9BY60 117 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 TAF9BQ9HBM6 251 aa11.14□□□□□ -0.63
FN1-202ENST00000336916 PRRT4C9JH25 899 aa11.13□□□□□ -0.63
FN1-202ENST00000336916 PRSS44E7EML9 344 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms