RNA–Protein interactions for RNA: ENST00000335508.10

SF3B1-201, Transcript of splicing factor 3b subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B1, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-201ENST00000335508 Q6ZTK2 550 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 ANGPTL5Q86XS5 388 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 SGPP2Q8IWX5 399 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 PRSS35Q8N3Z0 413 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 OR51T1Q8NGJ9 327 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 OR2T35Q8NGX2 323 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 NAA50Q9GZZ1 169 aaKnown RBP6.14□□□□□ -1.43
SF3B1-201ENST00000335508 FSCN3Q9NQT6 498 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 ZMAT5Q9UDW3 170 aaKnown RBP6.14□□□□□ -1.43
SF3B1-201ENST00000335508 DTX4Q9Y2E6 619 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 MPC1Q9Y5U8 109 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 A0A0J9YW62 118 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 LOC100289279A0A1B0GTE1 492 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 SULT1C2O00338 296 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 UPK1BO75841 260 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 ECI1P42126 302 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 DOC2BQ14184 412 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 PLPPR5Q32ZL2 321 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 AGAP6Q5VW22 663 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 ANKRD34AQ69YU3 496 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 ZGRF1Q86YA3 2104 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 ZFP62Q8NB50 900 aaPredicted RBP6.14□□□□□ -1.43
SF3B1-201ENST00000335508 FLVCR1-AS1Q8TAF5 88 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 DYNC2LI1Q8TCX1 351 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 GCDHQ92947 438 aaPredicted RBP6.14□□□□□ -1.43
SF3B1-201ENST00000335508 PTP4A1Q93096 173 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 FGGYQ96C11 551 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 TIMD4Q96H15 378 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 PMF1-BGLAPU3KQ54 211 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 DOCK10Q96BY6 2186 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 BHLHE40O14503 412 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 APEX1P27695 318 aaKnown RBP6.14□□□□□ -1.43
SF3B1-201ENST00000335508 MPGP29372 298 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 CDC20Q12834 499 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 C1QL3Q5VWW1 255 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 COX15Q7KZN9 410 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 ZFAND1Q8TCF1 268 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 PRSS27Q9BQR3 290 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 OR2B2Q9GZK3 357 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 TSPAN10Q9H1Z9 355 aaPredicted RBP6.14□□□□□ -1.43
SF3B1-201ENST00000335508 PCDHB10Q9UN67 800 aa6.14□□□□□ -1.43
SF3B1-201ENST00000335508 COL4A6Q14031 1691 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 GABARAPH6UMI1 98 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 ENSAO43768 121 aaKnown RBP6.13□□□□□ -1.43
SF3B1-201ENST00000335508 CA11O75493 328 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 CD1AP06126 327 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 THBS4P35443 961 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 ETV5P41161 510 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 CDKN2AP42771 156 aaKnown RBP6.13□□□□□ -1.43
SF3B1-201ENST00000335508 ETV1P50549 477 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 GP2P55259 537 aaKnown RBP6.13□□□□□ -1.43
SF3B1-201ENST00000335508 GNG3P63215 75 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 GNMTQ14749 295 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 PCGF3Q3KNV8 242 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 TMEM108Q6UXF1 575 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 CASTOR1Q8WTX7 329 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 KIRREL1Q96J84 757 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 HYLS1Q96M11 299 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 METTL8Q9H825 291 aaKnown RBP6.13□□□□□ -1.43
SF3B1-201ENST00000335508 SCN5AQ14524 2016 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 BORCS7-ASMTA0A0B4J1R7 106 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 ZC3H12DA2A288 527 aaKnown RBP6.13□□□□□ -1.43
SF3B1-201ENST00000335508 SERPINE3A8MV23 424 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 H3BSH0 61 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 SELENOFO60613 162 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 CSN2P05814 226 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 LPLP06858 475 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 S100A1P23297 94 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 RPS19P39019 145 aaKnown RBP6.13□□□□□ -1.43
SF3B1-201ENST00000335508 LIMS1P48059 325 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 ACSM1Q08AH1 577 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 SPCS2Q15005 226 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 FBXW9Q5XUX1 488 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 TMEM251Q8N6I4 163 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 OR13G1Q8NGZ3 307 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 LGALS14Q8TCE9 139 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 STEAP1Q9UHE8 339 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 OR4C45A6NMZ5 311 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 PRSS44E7EML9 344 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 TRAF3IP2O43734 574 aaPredicted RBP6.13□□□□□ -1.43
SF3B1-201ENST00000335508 NXPH2O95156 264 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 SLC2A5P22732 501 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 PTH2RP49190 550 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 PMPCAQ10713 525 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 RBMS2Q15434 407 aaKnown RBP6.13□□□□□ -1.43
SF3B1-201ENST00000335508 MOB3CQ70IA8 216 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 KANSL1Q7Z3B3 1105 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 VASH2Q86V25 355 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 ELMOD2Q8IZ81 293 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 ARRDC1Q8N5I2 433 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 OR2M7Q8NG81 312 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 SEH1LQ96EE3 360 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 A0A1B0GVC2 190 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 C4orf51C9J302 202 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 ONECUT2O95948 504 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 TRAPPC2P0DI81 140 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 TRAPPC2BP0DI82 140 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 CD59P13987 128 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 RFC3P40938 356 aa6.13□□□□□ -1.43
SF3B1-201ENST00000335508 RPS27P42677 84 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms