RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 GDI2P50395 445 aaKnown RBP18.63■□□□□ 0.57
TPM1-204ENST00000334895 TPTEP56180 551 aa18.63■□□□□ 0.57
TPM1-204ENST00000334895 SORDQ00796 357 aa18.63■□□□□ 0.57
TPM1-204ENST00000334895 ARL9Q6T311 187 aa18.63■□□□□ 0.57
TPM1-204ENST00000334895 DRAM2Q6UX65 266 aa18.63■□□□□ 0.57
TPM1-204ENST00000334895 SATL1Q86VE3 508 aa18.63■□□□□ 0.57
TPM1-204ENST00000334895 UFD1Q92890 307 aa18.63■□□□□ 0.57
TPM1-204ENST00000334895 SMIM19Q96E16 107 aa18.63■□□□□ 0.57
TPM1-204ENST00000334895 ZC3HAV1LQ96H79 300 aaKnown RBP18.63■□□□□ 0.57
TPM1-204ENST00000334895 OR52A1Q9UKL2 312 aa18.63■□□□□ 0.57
TPM1-204ENST00000334895 DOPEY1Q5JWR5 2465 aa18.63■□□□□ 0.57
TPM1-204ENST00000334895 TRBV2A0A0J9YWF9 115 aa18.63■□□□□ 0.57
TPM1-204ENST00000334895 PLPP2O43688 288 aa18.63■□□□□ 0.57
TPM1-204ENST00000334895 ZFPL1O95159 310 aa18.63■□□□□ 0.57
TPM1-204ENST00000334895 CCNOP22674 350 aa18.63■□□□□ 0.57
TPM1-204ENST00000334895 WNT5AP41221 380 aa18.63■□□□□ 0.57
TPM1-204ENST00000334895 SLC6A9P48067 706 aa18.63■□□□□ 0.57
TPM1-204ENST00000334895 FAM57BQ71RH2 274 aa18.63■□□□□ 0.57
TPM1-204ENST00000334895 SSX8Q7RTT4 187 aa18.63■□□□□ 0.57
TPM1-204ENST00000334895 YIPF6Q96EC8 236 aa18.63■□□□□ 0.57
TPM1-204ENST00000334895 PDCD1LG2Q9BQ51 273 aa18.63■□□□□ 0.57
TPM1-204ENST00000334895 PBOV1Q9GZY1 135 aa18.63■□□□□ 0.57
TPM1-204ENST00000334895 MOV10Q9HCE1 1003 aaKnown RBP18.63■□□□□ 0.57
TPM1-204ENST00000334895 NUFIP1Q9UHK0 495 aaKnown RBP18.63■□□□□ 0.57
TPM1-204ENST00000334895 GTF2A1LQ9UNN4 478 aa18.63■□□□□ 0.57
TPM1-204ENST00000334895 ANXA2P07355 339 aaKnown RBP18.62■□□□□ 0.57
TPM1-204ENST00000334895 CCR9P51686 369 aa18.62■□□□□ 0.57
TPM1-204ENST00000334895 SLC3A1Q07837 685 aa18.62■□□□□ 0.57
TPM1-204ENST00000334895 SNAI3Q3KNW1 292 aa18.62■□□□□ 0.57
TPM1-204ENST00000334895 C3orf36Q3SXR2 165 aa18.62■□□□□ 0.57
TPM1-204ENST00000334895 COLCA1Q6ZS62 124 aa18.62■□□□□ 0.57
TPM1-204ENST00000334895 WFDC8Q8IUA0 241 aa18.62■□□□□ 0.57
TPM1-204ENST00000334895 OR8B12Q8NGG6 310 aa18.62■□□□□ 0.57
TPM1-204ENST00000334895 LINC01560Q8TB33 94 aa18.62■□□□□ 0.57
TPM1-204ENST00000334895 NDUFB11Q9NX14 153 aa18.62■□□□□ 0.57
TPM1-204ENST00000334895 SF3B6Q9Y3B4 125 aaKnown RBP18.62■□□□□ 0.57
TPM1-204ENST00000334895 N6AMT1Q9Y5N5 214 aa18.62■□□□□ 0.57
TPM1-204ENST00000334895 M0R1B8 84 aa18.61■□□□□ 0.57
TPM1-204ENST00000334895 CCRL2O00421 344 aa18.61■□□□□ 0.57
TPM1-204ENST00000334895 APOC1P02654 83 aa18.61■□□□□ 0.57
TPM1-204ENST00000334895 TTRP02766 147 aa18.61■□□□□ 0.57
TPM1-204ENST00000334895 GPR50Q13585 617 aa18.61■□□□□ 0.57
TPM1-204ENST00000334895 TBC1D28Q2M2D7 210 aa18.61■□□□□ 0.57
TPM1-204ENST00000334895 BCL2L15Q5TBC7 163 aa18.61■□□□□ 0.57
TPM1-204ENST00000334895 ELMOD2Q8IZ81 293 aa18.61■□□□□ 0.57
TPM1-204ENST00000334895 RGP1Q92546 391 aaPredicted RBP18.61■□□□□ 0.57
TPM1-204ENST00000334895 GHSRQ92847 366 aa18.61■□□□□ 0.57
TPM1-204ENST00000334895 DCLRE1CQ96SD1 692 aaKnown RBP18.61■□□□□ 0.57
TPM1-204ENST00000334895 MED18Q9BUE0 208 aa18.61■□□□□ 0.57
TPM1-204ENST00000334895 C1QTNF5Q9BXJ0 243 aa18.61■□□□□ 0.57
TPM1-204ENST00000334895 MOB1AQ9H8S9 216 aa18.61■□□□□ 0.57
TPM1-204ENST00000334895 SPTAN1Q13813 2472 aaKnown RBP18.61■□□□□ 0.57
TPM1-204ENST00000334895 ANKHD1Q8IWZ3 2542 aaKnown RBP18.61■□□□□ 0.57
TPM1-204ENST00000334895 ZNF35P13682 527 aa18.6■□□□□ 0.57
TPM1-204ENST00000334895 RPS25P62851 125 aaKnown RBP18.6■□□□□ 0.57
TPM1-204ENST00000334895 ODF4Q2M2E3 257 aa18.6■□□□□ 0.57
TPM1-204ENST00000334895 GPR141Q7Z602 305 aa18.6■□□□□ 0.57
TPM1-204ENST00000334895 ZNF101Q8IZC7 436 aa18.6■□□□□ 0.57
TPM1-204ENST00000334895 RDH10Q8IZV5 341 aa18.6■□□□□ 0.57
TPM1-204ENST00000334895 ACOD1A6NK06 481 aa18.6■□□□□ 0.57
TPM1-204ENST00000334895 C19orf84I3L1E1 186 aa18.6■□□□□ 0.57
TPM1-204ENST00000334895 LCATP04180 440 aa18.6■□□□□ 0.57
TPM1-204ENST00000334895 CD1AP06126 327 aa18.6■□□□□ 0.57
TPM1-204ENST00000334895 CD36P16671 472 aa18.6■□□□□ 0.57
TPM1-204ENST00000334895 CALCRP30988 508 aa18.6■□□□□ 0.57
TPM1-204ENST00000334895 NAAAQ02083 359 aa18.6■□□□□ 0.57
TPM1-204ENST00000334895 IGHV2OR16-5A0A0B4J2B6 119 aa18.59■□□□□ 0.57
TPM1-204ENST00000334895 ICMTO60725 284 aa18.59■□□□□ 0.57
TPM1-204ENST00000334895 NGFP01138 241 aa18.59■□□□□ 0.57
TPM1-204ENST00000334895 RPS11P62280 158 aaKnown RBP eCLIP18.59■□□□□ 0.57
TPM1-204ENST00000334895 RFPL4BQ6ZWI9 263 aa18.59■□□□□ 0.57
TPM1-204ENST00000334895 OR1J2Q8NGS2 313 aa18.59■□□□□ 0.57
TPM1-204ENST00000334895 OR13C5Q8NGS8 318 aa18.59■□□□□ 0.57
TPM1-204ENST00000334895 OR10AC1Q8NH08 325 aa18.59■□□□□ 0.57
TPM1-204ENST00000334895 OR5AK2Q8NH90 309 aa18.59■□□□□ 0.57
TPM1-204ENST00000334895 TMEM203Q969S6 136 aa18.59■□□□□ 0.57
TPM1-204ENST00000334895 PGAM5Q96HS1 289 aa18.59■□□□□ 0.57
TPM1-204ENST00000334895 TMED9Q9BVK6 235 aa18.59■□□□□ 0.57
TPM1-204ENST00000334895 CDH20Q9HBT6 801 aa18.59■□□□□ 0.57
TPM1-204ENST00000334895 CADP27708 2225 aa18.59■□□□□ 0.57
TPM1-204ENST00000334895 TMEM212A6NML5 194 aa18.58■□□□□ 0.56
TPM1-204ENST00000334895 IGLV3-1P01715 115 aa18.58■□□□□ 0.56
TPM1-204ENST00000334895 SOX7Q9BT81 388 aa18.58■□□□□ 0.56
TPM1-204ENST00000334895 FUNDC2Q9BWH2 189 aa18.58■□□□□ 0.56
TPM1-204ENST00000334895 NDRG3Q9UGV2 375 aa18.58■□□□□ 0.56
TPM1-204ENST00000334895 ZNF281Q9Y2X9 895 aa18.58■□□□□ 0.56
TPM1-204ENST00000334895 HEATR1Q9H583 2144 aaKnown RBP18.58■□□□□ 0.56
TPM1-204ENST00000334895 A0A1B0GTI1 187 aa18.57■□□□□ 0.56
TPM1-204ENST00000334895 DPPA5A6NC42 116 aa18.57■□□□□ 0.56
TPM1-204ENST00000334895 DPRXA6NFQ7 191 aa18.57■□□□□ 0.56
TPM1-204ENST00000334895 H3BSH0 61 aa18.57■□□□□ 0.56
TPM1-204ENST00000334895 P2RY10O00398 339 aa18.57■□□□□ 0.56
TPM1-204ENST00000334895 TBX1O43435 398 aa18.57■□□□□ 0.56
TPM1-204ENST00000334895 GPRIN2O60269 458 aa18.57■□□□□ 0.56
TPM1-204ENST00000334895 CD40P25942 277 aa18.57■□□□□ 0.56
TPM1-204ENST00000334895 GABRA5P31644 462 aa18.57■□□□□ 0.56
TPM1-204ENST00000334895 SPOCK1Q08629 439 aa18.57■□□□□ 0.56
TPM1-204ENST00000334895 INSL4Q14641 139 aa18.57■□□□□ 0.56
TPM1-204ENST00000334895 ZNF544Q6NX49 715 aa18.57■□□□□ 0.56
TPM1-204ENST00000334895 ZNF676Q8N7Q3 588 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms