RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 LCN6P62502 163 aa16.29■□□□□ 0.2
PKP3-201ENST00000331563 RPS21P63220 83 aaKnown RBP16.29■□□□□ 0.2
PKP3-201ENST00000331563 PMPCAQ10713 525 aa16.29■□□□□ 0.2
PKP3-201ENST00000331563 EXOSC7Q15024 291 aaKnown RBP16.29■□□□□ 0.2
PKP3-201ENST00000331563 EBPQ15125 230 aaKnown RBP16.29■□□□□ 0.2
PKP3-201ENST00000331563 OTPQ5XKR4 325 aa16.29■□□□□ 0.2
PKP3-201ENST00000331563 ZNF761Q86XN6 746 aaPredicted RBP16.29■□□□□ 0.2
PKP3-201ENST00000331563 C1QL4Q86Z23 238 aa16.29■□□□□ 0.2
PKP3-201ENST00000331563 ZNF595Q8IYB9 648 aa16.29■□□□□ 0.2
PKP3-201ENST00000331563 ZNF615Q8N8J6 731 aa16.29■□□□□ 0.2
PKP3-201ENST00000331563 AVL9Q8NBF6 648 aa16.29■□□□□ 0.2
PKP3-201ENST00000331563 ADAMTS17Q8TE56 1095 aa16.29■□□□□ 0.2
PKP3-201ENST00000331563 POM121Q96HA1 1249 aa16.29■□□□□ 0.2
PKP3-201ENST00000331563 SMIM8Q96KF7 97 aa16.29■□□□□ 0.2
PKP3-201ENST00000331563 TRIM2Q9C040 744 aa16.29■□□□□ 0.2
PKP3-201ENST00000331563 NRSN2Q9GZP1 204 aa16.29■□□□□ 0.2
PKP3-201ENST00000331563 PARP12Q9H0J9 701 aaKnown RBP16.29■□□□□ 0.2
PKP3-201ENST00000331563 GDF2Q9UK05 429 aaPredicted RBP16.29■□□□□ 0.2
PKP3-201ENST00000331563 DCTN6O00399 190 aa16.28■□□□□ 0.2
PKP3-201ENST00000331563 AK1P00568 194 aa16.28■□□□□ 0.2
PKP3-201ENST00000331563 CD5P06127 495 aa16.28■□□□□ 0.2
PKP3-201ENST00000331563 EMDP50402 254 aa16.28■□□□□ 0.2
PKP3-201ENST00000331563 TMEM92Q6UXU6 159 aa16.28■□□□□ 0.2
PKP3-201ENST00000331563 ACBD4Q8NC06 268 aa16.28■□□□□ 0.2
PKP3-201ENST00000331563 OR56B1Q8NGI3 324 aa16.28■□□□□ 0.2
PKP3-201ENST00000331563 TSACCQ96A04 125 aaPredicted RBP16.28■□□□□ 0.2
PKP3-201ENST00000331563 TCTN2Q96GX1 697 aa16.28■□□□□ 0.2
PKP3-201ENST00000331563 SLC41A2Q96JW4 573 aa16.28■□□□□ 0.2
PKP3-201ENST00000331563 ZNF576Q9H609 170 aa16.28■□□□□ 0.2
PKP3-201ENST00000331563 TAF9BQ9HBM6 251 aa16.28■□□□□ 0.2
PKP3-201ENST00000331563 PHPT1Q9NRX4 125 aaPredicted RBP16.28■□□□□ 0.2
PKP3-201ENST00000331563 PAX1P15863 534 aa16.28■□□□□ 0.2
PKP3-201ENST00000331563 HTR2CP28335 458 aa16.28■□□□□ 0.2
PKP3-201ENST00000331563 CRABP1P29762 137 aa16.28■□□□□ 0.2
PKP3-201ENST00000331563 CD81P60033 236 aa16.28■□□□□ 0.2
PKP3-201ENST00000331563 CYCSP99999 105 aaKnown RBP16.28■□□□□ 0.2
PKP3-201ENST00000331563 PLAURQ03405 335 aa16.28■□□□□ 0.2
PKP3-201ENST00000331563 TNFRSF9Q07011 255 aa16.28■□□□□ 0.2
PKP3-201ENST00000331563 FOXRED2Q8IWF2 684 aa16.28■□□□□ 0.2
PKP3-201ENST00000331563 CHST4Q8NCG5 386 aa16.28■□□□□ 0.2
PKP3-201ENST00000331563 RBM18Q96H35 190 aaKnown RBP16.28■□□□□ 0.2
PKP3-201ENST00000331563 SLC17A5Q9NRA2 495 aa16.28■□□□□ 0.2
PKP3-201ENST00000331563 H0YIZ8 118 aa16.27■□□□□ 0.2
PKP3-201ENST00000331563 RAB6AP20340 208 aa16.27■□□□□ 0.2
PKP3-201ENST00000331563 MOGAT2Q3SYC2 334 aa16.27■□□□□ 0.2
PKP3-201ENST00000331563 EXOSC6Q5RKV6 272 aaKnown RBP16.27■□□□□ 0.2
PKP3-201ENST00000331563 KIRREL2Q6UWL6 708 aa16.27■□□□□ 0.2
PKP3-201ENST00000331563 NPSR1Q6W5P4 371 aa16.27■□□□□ 0.2
PKP3-201ENST00000331563 LRRC69Q6ZNQ3 347 aa16.27■□□□□ 0.2
PKP3-201ENST00000331563 PRSS35Q8N3Z0 413 aa16.27■□□□□ 0.2
PKP3-201ENST00000331563 JAGN1Q8N5M9 183 aa16.27■□□□□ 0.2
PKP3-201ENST00000331563 GVQW1Q8N7I0 195 aa16.27■□□□□ 0.2
PKP3-201ENST00000331563 MCHR2Q969V1 340 aa16.27■□□□□ 0.2
PKP3-201ENST00000331563 NMNAT2Q9BZQ4 307 aa16.27■□□□□ 0.2
PKP3-201ENST00000331563 SMOC1Q9H4F8 434 aa16.27■□□□□ 0.2
PKP3-201ENST00000331563 CKLFQ9UBR5 152 aa16.27■□□□□ 0.2
PKP3-201ENST00000331563 ZDHHC8Q9ULC8 765 aa16.27■□□□□ 0.2
PKP3-201ENST00000331563 DUS4LO95620 317 aaKnown RBP16.27■□□□□ 0.2
PKP3-201ENST00000331563 F10P00742 488 aa16.27■□□□□ 0.2
PKP3-201ENST00000331563 RASGEF1BQ0VAM2 473 aa16.27■□□□□ 0.2
PKP3-201ENST00000331563 DEFB134Q4QY38 66 aa16.27■□□□□ 0.2
PKP3-201ENST00000331563 AWAT2Q6E213 333 aa16.27■□□□□ 0.2
PKP3-201ENST00000331563 PPP1R3BQ86XI6 285 aa16.27■□□□□ 0.2
PKP3-201ENST00000331563 CDRT4Q8N9R6 151 aa16.27■□□□□ 0.2
PKP3-201ENST00000331563 BHLHE23Q8NDY6 225 aa16.27■□□□□ 0.2
PKP3-201ENST00000331563 BCO1Q9HAY6 547 aa16.27■□□□□ 0.2
PKP3-201ENST00000331563 OR5AC2Q9NZP5 309 aa16.27■□□□□ 0.2
PKP3-201ENST00000331563 LDB3O75112 727 aa16.27■□□□□ 0.19
PKP3-201ENST00000331563 FCGR3AP08637 254 aa16.27■□□□□ 0.19
PKP3-201ENST00000331563 OR8U9P0C7N5 309 aa16.27■□□□□ 0.19
PKP3-201ENST00000331563 TLX1P31314 330 aaPredicted RBP16.27■□□□□ 0.19
PKP3-201ENST00000331563 NDUFA6P56556 154 aa16.27■□□□□ 0.19
PKP3-201ENST00000331563 RPL7L1Q6DKI1 246 aaKnown RBP16.27■□□□□ 0.19
PKP3-201ENST00000331563 ULK3Q6PHR2 472 aa16.27■□□□□ 0.19
PKP3-201ENST00000331563 Q6ZRG5 221 aa16.27■□□□□ 0.19
PKP3-201ENST00000331563 TRAPPC6BQ86SZ2 158 aa16.27■□□□□ 0.19
PKP3-201ENST00000331563 OR8U1Q8NH10 309 aa16.27■□□□□ 0.19
PKP3-201ENST00000331563 ZNF563Q8TA94 476 aa16.27■□□□□ 0.19
PKP3-201ENST00000331563 APOOQ9BUR5 198 aa16.27■□□□□ 0.19
PKP3-201ENST00000331563 SPACA1Q9HBV2 294 aa16.27■□□□□ 0.19
PKP3-201ENST00000331563 FAM86C1Q9NVL1 165 aa16.27■□□□□ 0.19
PKP3-201ENST00000331563 ZNF860A6NHJ4 632 aa16.26■□□□□ 0.19
PKP3-201ENST00000331563 PLRG1O43660 514 aaKnown RBP16.26■□□□□ 0.19
PKP3-201ENST00000331563 ABHD16AO95870 558 aa16.26■□□□□ 0.19
PKP3-201ENST00000331563 IL2RAP01589 272 aa16.26■□□□□ 0.19
PKP3-201ENST00000331563 CPMP14384 443 aa16.26■□□□□ 0.19
PKP3-201ENST00000331563 S100A10P60903 97 aa16.26■□□□□ 0.19
PKP3-201ENST00000331563 SSPNQ14714 243 aa16.26■□□□□ 0.19
PKP3-201ENST00000331563 SLC22A6Q4U2R8 563 aa16.26■□□□□ 0.19
PKP3-201ENST00000331563 WDR38Q5JTN6 314 aa16.26■□□□□ 0.19
PKP3-201ENST00000331563 PRR18Q8N4B5 295 aa16.26■□□□□ 0.19
PKP3-201ENST00000331563 CD300LFQ8TDQ1 290 aa16.26■□□□□ 0.19
PKP3-201ENST00000331563 MRGPRX1Q96LB2 322 aa16.26■□□□□ 0.19
PKP3-201ENST00000331563 C19orf53Q9UNZ5 99 aaPredicted RBP16.26■□□□□ 0.19
PKP3-201ENST00000331563 ARPC3O15145 178 aa16.26■□□□□ 0.19
PKP3-201ENST00000331563 TNFRSF4P43489 277 aa16.26■□□□□ 0.19
PKP3-201ENST00000331563 HNRNPKP61978 463 aaKnown RBP eCLIP16.26■□□□□ 0.194e-7■■■■□ 22.5
PKP3-201ENST00000331563 EIF5AP63241 154 aaKnown RBP16.26■□□□□ 0.19
PKP3-201ENST00000331563 HMGN3Q15651 99 aa16.26■□□□□ 0.19
PKP3-201ENST00000331563 COL13A1Q5TAT6 717 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms