RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 TRA2AQ13595 282 aaKnown RBP eCLIP12.89□□□□□ -0.354e-13■■■■□ 25.8
TPM3-206ENST00000330188 OPCMLQ14982 345 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 RAB12Q6IQ22 244 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 OPN5Q6U736 354 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 IDO2Q6ZQW0 420 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 OR8B12Q8NGG6 310 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 FAM46BQ96A09 425 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 PNPLA2Q96AD5 504 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 ELMOD3Q96FG2 381 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 SOX7Q9BT81 388 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 PROK2Q9HC23 129 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 UPB1Q9UBR1 384 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 UBQLN2Q9UHD9 624 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 AUP1Q9Y679 476 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 PMS2P2O95744 297 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 VSIG8P0DPA2 414 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 CCL3P10147 92 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 SLC2A1P11166 492 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 ZNF35P13682 527 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 CLDN17P56750 224 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 ZNF121P58317 390 aaPredicted RBP12.89□□□□□ -0.35
TPM3-206ENST00000330188 OC90Q02509 493 aaPredicted RBP12.89□□□□□ -0.35
TPM3-206ENST00000330188 TAF13Q15543 124 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 C4orf46Q504U0 113 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 ESCO2Q56NI9 601 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 M1APQ8TC57 530 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 NTNG2Q96CW9 530 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 CMBLQ96DG6 245 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 SLC25A21Q9BQT8 299 aaPredicted RBP12.89□□□□□ -0.35
TPM3-206ENST00000330188 ANGPTL4Q9BY76 406 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 ZNF319Q9P2F9 582 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 SLC5A6Q9Y289 635 aa12.89□□□□□ -0.35
TPM3-206ENST00000330188 TMEM82A0PJX8 343 aa12.88□□□□□ -0.35
TPM3-206ENST00000330188 ZNF736B4DX44 427 aaPredicted RBP12.88□□□□□ -0.35
TPM3-206ENST00000330188 C9J4A7 227 aa12.88□□□□□ -0.35
TPM3-206ENST00000330188 MCRIP1C9JLW8 97 aa12.88□□□□□ -0.35
TPM3-206ENST00000330188 F5H5P2 479 aa12.88□□□□□ -0.35
TPM3-206ENST00000330188 L7N2F9 121 aa12.88□□□□□ -0.35
TPM3-206ENST00000330188 ZNF20P17024 532 aa12.88□□□□□ -0.35
TPM3-206ENST00000330188 NFYAP23511 347 aaPredicted RBP12.88□□□□□ -0.35
TPM3-206ENST00000330188 P2RX3P56373 397 aa12.88□□□□□ -0.35
TPM3-206ENST00000330188 H3F3AP84243 136 aa12.88□□□□□ -0.35
TPM3-206ENST00000330188 MC2RQ01718 297 aa12.88□□□□□ -0.35
TPM3-206ENST00000330188 DCAF12L2Q5VW00 463 aa12.88□□□□□ -0.35
TPM3-206ENST00000330188 CHMP1BQ7LBR1 199 aa12.88□□□□□ -0.35
TPM3-206ENST00000330188 FJX1Q86VR8 437 aa12.88□□□□□ -0.35
TPM3-206ENST00000330188 TNFAIP8L1Q8WVP5 186 aa12.88□□□□□ -0.35
TPM3-206ENST00000330188 OR4E1P0C645 316 aa12.88□□□□□ -0.35
TPM3-206ENST00000330188 LIFP15018 202 aa12.88□□□□□ -0.35
TPM3-206ENST00000330188 ABOP16442 354 aa12.88□□□□□ -0.35
TPM3-206ENST00000330188 CX3CR1P49238 355 aa12.88□□□□□ -0.35
TPM3-206ENST00000330188 DUSP3P51452 185 aaPredicted RBP12.88□□□□□ -0.35
TPM3-206ENST00000330188 POU4F3Q15319 338 aa12.88□□□□□ -0.35
TPM3-206ENST00000330188 CLLU1Q5K131 121 aa12.88□□□□□ -0.35
TPM3-206ENST00000330188 RNF144BQ7Z419 303 aa12.88□□□□□ -0.35
TPM3-206ENST00000330188 ABHD12BQ7Z5M8 362 aaPredicted RBP12.88□□□□□ -0.35
TPM3-206ENST00000330188 ZNF584Q8IVC4 421 aa12.88□□□□□ -0.35
TPM3-206ENST00000330188 BPIFB2Q8N4F0 458 aa12.88□□□□□ -0.35
TPM3-206ENST00000330188 OR4S1Q8NGB4 309 aa12.88□□□□□ -0.35
TPM3-206ENST00000330188 OR13C8Q8NGS7 320 aa12.88□□□□□ -0.35
TPM3-206ENST00000330188 CCDC107Q8WV48 283 aa12.88□□□□□ -0.35
TPM3-206ENST00000330188 GNRHR2Q96P88 292 aa12.88□□□□□ -0.35
TPM3-206ENST00000330188 SLC6A7Q99884 636 aa12.88□□□□□ -0.35
TPM3-206ENST00000330188 EDEM2Q9BV94 578 aa12.88□□□□□ -0.35
TPM3-206ENST00000330188 SH2D2AQ9NP31 389 aa12.88□□□□□ -0.35
TPM3-206ENST00000330188 FBLN5Q9UBX5 448 aa12.88□□□□□ -0.35
TPM3-206ENST00000330188 COLQQ9Y215 455 aaPredicted RBP12.88□□□□□ -0.35
TPM3-206ENST00000330188 TMEM14DPA8MWL7 114 aa12.87□□□□□ -0.35
TPM3-206ENST00000330188 H3BUI4 141 aa12.87□□□□□ -0.35
TPM3-206ENST00000330188 TLX3O43711 291 aaPredicted RBP12.87□□□□□ -0.35
TPM3-206ENST00000330188 ERCC1P07992 297 aaPredicted RBP12.87□□□□□ -0.35
TPM3-206ENST00000330188 C4BPBP20851 252 aa12.87□□□□□ -0.35
TPM3-206ENST00000330188 ZNF93P35789 620 aaPredicted RBP12.87□□□□□ -0.35
TPM3-206ENST00000330188 SSR4P51571 173 aa12.87□□□□□ -0.35
TPM3-206ENST00000330188 MPPED2Q15777 294 aa12.87□□□□□ -0.35
TPM3-206ENST00000330188 CDNFQ49AH0 187 aa12.87□□□□□ -0.35
TPM3-206ENST00000330188 ATPAF1Q5TC12 328 aaPredicted RBP12.87□□□□□ -0.35
TPM3-206ENST00000330188 B3GNTL1Q67FW5 361 aaPredicted RBP12.87□□□□□ -0.35
TPM3-206ENST00000330188 AWAT2Q6E213 333 aa12.87□□□□□ -0.35
TPM3-206ENST00000330188 TRAPPC6BQ86SZ2 158 aa12.87□□□□□ -0.35
TPM3-206ENST00000330188 COMMD2Q86X83 199 aa12.87□□□□□ -0.35
TPM3-206ENST00000330188 OR5AS1Q8N127 324 aa12.87□□□□□ -0.35
TPM3-206ENST00000330188 OR2Y1Q8NGV0 311 aa12.87□□□□□ -0.35
TPM3-206ENST00000330188 PAQR8Q8TEZ7 354 aa12.87□□□□□ -0.35
TPM3-206ENST00000330188 MYOZ1Q9NP98 299 aaPredicted RBP12.87□□□□□ -0.35
TPM3-206ENST00000330188 GLTPQ9NZD2 209 aa12.87□□□□□ -0.35
TPM3-206ENST00000330188 MAB21L2Q9Y586 359 aa12.87□□□□□ -0.35
TPM3-206ENST00000330188 G3V3Y1 287 aa12.86□□□□□ -0.35
TPM3-206ENST00000330188 SNAPC5O75971 98 aa12.86□□□□□ -0.35
TPM3-206ENST00000330188 RGS11O94810 467 aa12.86□□□□□ -0.35
TPM3-206ENST00000330188 ZNF17P17021 662 aa12.86□□□□□ -0.35
TPM3-206ENST00000330188 CCL1P22362 96 aa12.86□□□□□ -0.35
TPM3-206ENST00000330188 DSCR4P56555 118 aaPredicted RBP12.86□□□□□ -0.35
TPM3-206ENST00000330188 SEC61A1P61619 476 aaKnown RBP12.86□□□□□ -0.35
TPM3-206ENST00000330188 ANGPTL5Q86XS5 388 aa12.86□□□□□ -0.35
TPM3-206ENST00000330188 MAML2Q8IZL2 1156 aaPredicted RBP12.86□□□□□ -0.35
TPM3-206ENST00000330188 ZNF283Q8N7M2 679 aa12.86□□□□□ -0.35
TPM3-206ENST00000330188 CHST4Q8NCG5 386 aa12.86□□□□□ -0.35
TPM3-206ENST00000330188 SFXN2Q96NB2 322 aa12.86□□□□□ -0.35
TPM3-206ENST00000330188 GUCD1Q96NT3 240 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms