RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 SFTPDP35247 375 aa19.81■□□□□ 0.76
PNKP-201ENST00000322344 UNC119Q13432 240 aa19.81■□□□□ 0.76
PNKP-201ENST00000322344 CAMK2BQ13554 666 aa19.81■□□□□ 0.76
PNKP-201ENST00000322344 EXT1Q16394 746 aa19.81■□□□□ 0.76
PNKP-201ENST00000322344 TOR2AQ5JU69 321 aa19.81■□□□□ 0.76
PNKP-201ENST00000322344 CLVS2Q5SYC1 327 aa19.81■□□□□ 0.76
PNKP-201ENST00000322344 PGAP1Q75T13 922 aa19.81■□□□□ 0.76
PNKP-201ENST00000322344 FJX1Q86VR8 437 aa19.81■□□□□ 0.76
PNKP-201ENST00000322344 WDR5BQ86VZ2 330 aa19.81■□□□□ 0.76
PNKP-201ENST00000322344 GTPBP8Q8N3Z3 284 aaPredicted RBP19.81■□□□□ 0.76
PNKP-201ENST00000322344 OR13C9Q8NGT0 318 aa19.81■□□□□ 0.76
PNKP-201ENST00000322344 GAREM1Q9H706 876 aa19.81■□□□□ 0.76
PNKP-201ENST00000322344 AKIRIN1Q9H9L7 192 aaPredicted RBP19.81■□□□□ 0.76
PNKP-201ENST00000322344 FSCN3Q9NQT6 498 aa19.81■□□□□ 0.76
PNKP-201ENST00000322344 SHOXO15266 292 aa19.81■□□□□ 0.76
PNKP-201ENST00000322344 QDPRP09417 244 aa19.81■□□□□ 0.76
PNKP-201ENST00000322344 UBE2MP61081 183 aaKnown RBP19.81■□□□□ 0.76
PNKP-201ENST00000322344 FOXK1P85037 733 aa19.81■□□□□ 0.76
PNKP-201ENST00000322344 CDNFQ49AH0 187 aa19.81■□□□□ 0.76
PNKP-201ENST00000322344 RNASE10Q5GAN6 216 aaKnown RBP19.81■□□□□ 0.76
PNKP-201ENST00000322344 NHLRC3Q5JS37 347 aa19.81■□□□□ 0.76
PNKP-201ENST00000322344 ATPAF1Q5TC12 328 aaPredicted RBP19.81■□□□□ 0.76
PNKP-201ENST00000322344 CARD17Q5XLA6 110 aa19.81■□□□□ 0.76
PNKP-201ENST00000322344 B3GNTL1Q67FW5 361 aaPredicted RBP19.81■□□□□ 0.76
PNKP-201ENST00000322344 TMPPEQ6ZT21 453 aa19.81■□□□□ 0.76
PNKP-201ENST00000322344 OR2W3Q7Z3T1 314 aa19.81■□□□□ 0.76
PNKP-201ENST00000322344 TRAPPC6BQ86SZ2 158 aa19.81■□□□□ 0.76
PNKP-201ENST00000322344 ZNF700Q9H0M5 742 aa19.81■□□□□ 0.76
PNKP-201ENST00000322344 IGHV1-45A0A0A0MS14 117 aa19.8■□□□□ 0.76
PNKP-201ENST00000322344 TMEM14DPA8MWL7 114 aa19.8■□□□□ 0.76
PNKP-201ENST00000322344 RP2O75695 350 aa19.8■□□□□ 0.76
PNKP-201ENST00000322344 KLK3P07288 261 aaPredicted RBP19.8■□□□□ 0.76
PNKP-201ENST00000322344 RRASP10301 218 aa19.8■□□□□ 0.76
PNKP-201ENST00000322344 ZNF28P17035 718 aa19.8■□□□□ 0.76
PNKP-201ENST00000322344 CDAP32320 146 aa19.8■□□□□ 0.76
PNKP-201ENST00000322344 ZNF93P35789 620 aaPredicted RBP19.8■□□□□ 0.76
PNKP-201ENST00000322344 GRB2P62993 217 aaKnown RBP19.8■□□□□ 0.76
PNKP-201ENST00000322344 MFAP5Q13361 173 aa19.8■□□□□ 0.76
PNKP-201ENST00000322344 TRA2AQ13595 282 aaKnown RBP eCLIP19.8■□□□□ 0.76
PNKP-201ENST00000322344 DCAF12L2Q5VW00 463 aa19.8■□□□□ 0.76
PNKP-201ENST00000322344 TMUB2Q71RG4 321 aa19.8■□□□□ 0.76
PNKP-201ENST00000322344 TMED4Q7Z7H5 227 aa19.8■□□□□ 0.76
PNKP-201ENST00000322344 DTWD2Q8NBA8 298 aa19.8■□□□□ 0.76
PNKP-201ENST00000322344 CHST4Q8NCG5 386 aa19.8■□□□□ 0.76
PNKP-201ENST00000322344 ASH2LQ9UBL3 628 aa19.8■□□□□ 0.76
PNKP-201ENST00000322344 WIPF3A6NGB9 483 aa19.8■□□□□ 0.76
PNKP-201ENST00000322344 ARPC5O15511 151 aa19.8■□□□□ 0.76
PNKP-201ENST00000322344 CHRM2P08172 466 aa19.8■□□□□ 0.76
PNKP-201ENST00000322344 PPP3CBP16298 524 aa19.8■□□□□ 0.76
PNKP-201ENST00000322344 CCL1P22362 96 aa19.8■□□□□ 0.76
PNKP-201ENST00000322344 PRKXP51817 358 aa19.8■□□□□ 0.76
PNKP-201ENST00000322344 OC90Q02509 493 aaPredicted RBP19.8■□□□□ 0.76
PNKP-201ENST00000322344 HLXQ14774 488 aaPredicted RBP19.8■□□□□ 0.76
PNKP-201ENST00000322344 PRAMEF20Q5VT98 475 aa19.8■□□□□ 0.76
PNKP-201ENST00000322344 AWAT2Q6E213 333 aa19.8■□□□□ 0.76
PNKP-201ENST00000322344 LPCAT3Q6P1A2 487 aa19.8■□□□□ 0.76
PNKP-201ENST00000322344 SLC6A7Q99884 636 aa19.8■□□□□ 0.76
PNKP-201ENST00000322344 PNRC2Q9NPJ4 139 aaKnown RBP19.8■□□□□ 0.76
PNKP-201ENST00000322344 KCNN3Q9UGI6 736 aa19.8■□□□□ 0.76
PNKP-201ENST00000322344 FARSAQ9Y285 508 aaKnown RBP19.8■□□□□ 0.76
PNKP-201ENST00000322344 CACNA1EQ15878 2313 aa19.79■□□□□ 0.76
PNKP-201ENST00000322344 FXYD6-FXYD2A0A087WZ82 144 aa19.79■□□□□ 0.76
PNKP-201ENST00000322344 PDGFAP04085 211 aa19.79■□□□□ 0.76
PNKP-201ENST00000322344 TBPP20226 339 aa19.79■□□□□ 0.76
PNKP-201ENST00000322344 ZNF121P58317 390 aaPredicted RBP19.79■□□□□ 0.76
PNKP-201ENST00000322344 OR8B12Q8NGG6 310 aa19.79■□□□□ 0.76
PNKP-201ENST00000322344 OR13C8Q8NGS7 320 aa19.79■□□□□ 0.76
PNKP-201ENST00000322344 IMMP1LQ96LU5 166 aa19.79■□□□□ 0.76
PNKP-201ENST00000322344 FXYD6Q9H0Q3 95 aa19.79■□□□□ 0.76
PNKP-201ENST00000322344 PLEKHA6Q9Y2H5 1048 aa19.79■□□□□ 0.76
PNKP-201ENST00000322344 OR14I1A6ND48 311 aa19.78■□□□□ 0.76
PNKP-201ENST00000322344 B3GALNT1O75752 331 aa19.78■□□□□ 0.76
PNKP-201ENST00000322344 CRYZL1O95825 349 aa19.78■□□□□ 0.76
PNKP-201ENST00000322344 LSM6P62312 80 aaKnown RBP19.78■□□□□ 0.76
PNKP-201ENST00000322344 SCGB2B2Q4G0G5 96 aa19.78■□□□□ 0.76
PNKP-201ENST00000322344 DOK3Q7L591 496 aa19.78■□□□□ 0.76
PNKP-201ENST00000322344 ABHD12BQ7Z5M8 362 aaPredicted RBP19.78■□□□□ 0.76
PNKP-201ENST00000322344 COMMD2Q86X83 199 aa19.78■□□□□ 0.76
PNKP-201ENST00000322344 ANGPTL5Q86XS5 388 aa19.78■□□□□ 0.76
PNKP-201ENST00000322344 NAXDQ8IW45 347 aa19.78■□□□□ 0.76
PNKP-201ENST00000322344 ZDHHC22Q8N966 263 aa19.78■□□□□ 0.76
PNKP-201ENST00000322344 OR10R2Q8NGX6 335 aa19.78■□□□□ 0.76
PNKP-201ENST00000322344 M1APQ8TC57 530 aa19.78■□□□□ 0.76
PNKP-201ENST00000322344 ANGPTL4Q9BY76 406 aa19.78■□□□□ 0.76
PNKP-201ENST00000322344 RFPL4AA6NLU0 287 aa19.78■□□□□ 0.76
PNKP-201ENST00000322344 C9J4A7 227 aa19.78■□□□□ 0.76
PNKP-201ENST00000322344 D6RAR5 112 aa19.78■□□□□ 0.76
PNKP-201ENST00000322344 RFPL4AL1F8VTS6 287 aa19.78■□□□□ 0.76
PNKP-201ENST00000322344 RAMP1O60894 148 aa19.78■□□□□ 0.76
PNKP-201ENST00000322344 CX3CR1P49238 355 aa19.78■□□□□ 0.76
PNKP-201ENST00000322344 DUSP3P51452 185 aaPredicted RBP19.78■□□□□ 0.76
PNKP-201ENST00000322344 EIF3IQ13347 325 aaKnown RBP19.78■□□□□ 0.76
PNKP-201ENST00000322344 FAM189A2Q15884 450 aa19.78■□□□□ 0.76
PNKP-201ENST00000322344 HYAL4Q2M3T9 481 aa19.78■□□□□ 0.76
PNKP-201ENST00000322344 AGBL5Q8NDL9 886 aa19.78■□□□□ 0.76
PNKP-201ENST00000322344 IFT46Q9NQC8 304 aa19.78■□□□□ 0.76
PNKP-201ENST00000322344 GPR84Q9NQS5 396 aa19.78■□□□□ 0.76
PNKP-201ENST00000322344 RPA2P15927 270 aa19.77■□□□□ 0.76
PNKP-201ENST00000322344 CTSSP25774 331 aa19.77■□□□□ 0.76
PNKP-201ENST00000322344 CLDN17P56750 224 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms