RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 CLEC1AQ8NC01 280 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 OR6S1Q8NH40 331 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 CPNE2Q96FN4 548 aaPredicted RBP13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 SHDQ96IW2 340 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 GAREM1Q9H706 876 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 CENPMQ9NSP4 180 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 B9D1Q9UPM9 204 aa13.89□□□□□ -0.19
SHROOM1-201ENST00000319854 PRSS37A4D1T9 235 aa13.88□□□□□ -0.19
SHROOM1-201ENST00000319854 OR14I1A6ND48 311 aa13.88□□□□□ -0.19
SHROOM1-201ENST00000319854 EIF1BO60739 113 aaKnown RBP13.88□□□□□ -0.19
SHROOM1-201ENST00000319854 GUSBP08236 651 aa13.88□□□□□ -0.19
SHROOM1-201ENST00000319854 EIF1P41567 113 aaKnown RBP13.88□□□□□ -0.19
SHROOM1-201ENST00000319854 POLR2HP52434 150 aaKnown RBP13.88□□□□□ -0.19
SHROOM1-201ENST00000319854 POU3F1Q03052 451 aaPredicted RBP13.88□□□□□ -0.19
SHROOM1-201ENST00000319854 EEF1A1P5Q5VTE0 462 aa13.88□□□□□ -0.19
SHROOM1-201ENST00000319854 SLC43A2Q8N370 569 aa13.88□□□□□ -0.19
SHROOM1-201ENST00000319854 RPS4Y2Q8TD47 263 aa13.88□□□□□ -0.19
SHROOM1-201ENST00000319854 COMMD4Q9H0A8 199 aa13.88□□□□□ -0.19
SHROOM1-201ENST00000319854 NOSIPQ9Y314 301 aaKnown RBP13.88□□□□□ -0.19
SHROOM1-201ENST00000319854 FAM96BQ9Y3D0 163 aa13.88□□□□□ -0.19
SHROOM1-201ENST00000319854 A0A1W2PQM1 296 aa13.88□□□□□ -0.19
SHROOM1-201ENST00000319854 TMEM82A0PJX8 343 aa13.88□□□□□ -0.19
SHROOM1-201ENST00000319854 MASP2O00187 686 aa13.88□□□□□ -0.19
SHROOM1-201ENST00000319854 SULT2B1O00204 365 aa13.88□□□□□ -0.19
SHROOM1-201ENST00000319854 OR2F2O95006 317 aa13.88□□□□□ -0.19
SHROOM1-201ENST00000319854 GALNSP34059 522 aa13.88□□□□□ -0.19
SHROOM1-201ENST00000319854 CAPZA1P52907 286 aa13.88□□□□□ -0.19
SHROOM1-201ENST00000319854 SLC25A1P53007 311 aa13.88□□□□□ -0.19
SHROOM1-201ENST00000319854 OR2F1Q13607 317 aa13.88□□□□□ -0.19
SHROOM1-201ENST00000319854 ZNF684Q5T5D7 378 aa13.88□□□□□ -0.19
SHROOM1-201ENST00000319854 ETV3LQ6ZN32 361 aa13.88□□□□□ -0.19
SHROOM1-201ENST00000319854 ZNF704Q6ZNC4 412 aaPredicted RBP13.88□□□□□ -0.19
SHROOM1-201ENST00000319854 GALNT16Q8N428 558 aa13.88□□□□□ -0.19
SHROOM1-201ENST00000319854 PHYHIPQ92561 330 aa13.88□□□□□ -0.19
SHROOM1-201ENST00000319854 LRFN5Q96NI6 719 aa13.88□□□□□ -0.19
SHROOM1-201ENST00000319854 ACKR4Q9NPB9 350 aa13.88□□□□□ -0.19
SHROOM1-201ENST00000319854 CARHSP1Q9Y2V2 147 aaKnown RBP13.88□□□□□ -0.19
SHROOM1-201ENST00000319854 A0A1B0GTI1 187 aa13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 FAM25EA8MYX2 175 aa13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 ALOX12BO75342 701 aa13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 CASRP41180 1078 aa13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 RPL27P61353 136 aaKnown RBP13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 EIF2B1Q14232 305 aaKnown RBP13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 ZNF813Q6ZN06 617 aa13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 OR5M8Q8NGP6 311 aa13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 PDCD10Q9BUL8 212 aa13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 RAB33BQ9H082 229 aa13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 TREM1Q9NP99 234 aa13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 OR4C45A6NMZ5 311 aa13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 COLCA2A8K830 154 aa13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 A8MVM7 634 aa13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 PMS2P2O95744 297 aa13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 DCAF7P61962 342 aa13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 MFGE8Q08431 387 aaPredicted RBP13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 DHRS2Q13268 280 aa13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 RBM39Q14498 530 aaKnown RBP13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 LPAL2Q16609 132 aa13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 DMRTC1Q5HYR2 192 aa13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 PRAMEF20Q5VT98 475 aa13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 ACOT7LQ6ZUV0 252 aa13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 APCDD1LQ8NCL9 501 aa13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 IER2Q9BTL4 223 aa13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 CHRDQ9H2X0 955 aa13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 ZMAT3Q9HA38 289 aaKnown RBP13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 MRPL22Q9NWU5 206 aaKnown RBP13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 ETV7Q9Y603 341 aa13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 A0A1W2PPE3 182 aa13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 PATE3B3GLJ2 98 aa13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 ABHD16AO95870 558 aa13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 KIR3DL2P43630 455 aa13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 ZNF345Q14585 488 aa13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 GABRG1Q8N1C3 465 aa13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 PHYHIPLQ96FC7 376 aa13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 PLEKHA6Q9Y2H5 1048 aa13.87□□□□□ -0.19
SHROOM1-201ENST00000319854 G3V3Y1 287 aa13.86□□□□□ -0.19
SHROOM1-201ENST00000319854 K7ESF4 209 aa13.86□□□□□ -0.19
SHROOM1-201ENST00000319854 FGF16O43320 207 aa13.86□□□□□ -0.19
SHROOM1-201ENST00000319854 OR2J2O76002 312 aa13.86□□□□□ -0.19
SHROOM1-201ENST00000319854 EMP2P54851 167 aa13.86□□□□□ -0.19
SHROOM1-201ENST00000319854 STARD6P59095 220 aa13.86□□□□□ -0.19
SHROOM1-201ENST00000319854 ATPAF1Q5TC12 328 aaPredicted RBP13.86□□□□□ -0.19
SHROOM1-201ENST00000319854 CARD17Q5XLA6 110 aa13.86□□□□□ -0.19
SHROOM1-201ENST00000319854 ANKRD16Q6P6B7 361 aa13.86□□□□□ -0.19
SHROOM1-201ENST00000319854 OTOSQ8NHW6 89 aa13.86□□□□□ -0.19
SHROOM1-201ENST00000319854 DNASE2BQ8WZ79 361 aa13.86□□□□□ -0.19
SHROOM1-201ENST00000319854 ALX4Q9H161 411 aaPredicted RBP13.86□□□□□ -0.19
SHROOM1-201ENST00000319854 MIOXQ9UGB7 285 aa13.86□□□□□ -0.19
SHROOM1-201ENST00000319854 IGKV1D-43A0A0B4J1Z2 117 aa13.86□□□□□ -0.19
SHROOM1-201ENST00000319854 DCDC2BA2VCK2 349 aa13.86□□□□□ -0.19
SHROOM1-201ENST00000319854 OR2AT4A6NND4 320 aa13.86□□□□□ -0.19
SHROOM1-201ENST00000319854 SSX5O60225 188 aa13.86□□□□□ -0.19
SHROOM1-201ENST00000319854 FARS2O95363 451 aaKnown RBP13.86□□□□□ -0.19
SHROOM1-201ENST00000319854 SFTPDP35247 375 aa13.86□□□□□ -0.19
SHROOM1-201ENST00000319854 FOXF1Q12946 379 aa13.86□□□□□ -0.19
SHROOM1-201ENST00000319854 LYSMD4Q5XG99 296 aa13.86□□□□□ -0.19
SHROOM1-201ENST00000319854 GRINAQ7Z429 371 aa13.86□□□□□ -0.19
SHROOM1-201ENST00000319854 ANKRD37Q7Z713 158 aa13.86□□□□□ -0.19
SHROOM1-201ENST00000319854 GTPBP8Q8N3Z3 284 aaPredicted RBP13.86□□□□□ -0.19
SHROOM1-201ENST00000319854 ZNF248Q8NDW4 579 aa13.86□□□□□ -0.19
SHROOM1-201ENST00000319854 OR10G3Q8NGC4 313 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms