RNA–Protein interactions for RNA: ENST00000317840.9

COL3A1-202, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL3A1, Length 3,873 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-202ENST00000317840 ZNF878C9JN71 531 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 GPR31O00270 319 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 ITGB2P05107 769 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 AMY2BP19961 511 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 ZNF93P35789 620 aaPredicted RBP9.41□□□□□ -0.9
COL3A1-202ENST00000317840 DMWDQ09019 674 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 TRIM61Q5EBN2 209 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 PEG10Q86TG7 708 aaKnown RBP9.41□□□□□ -0.9
COL3A1-202ENST00000317840 CLRN3Q8NCR9 226 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 OR52N4Q8NGI2 321 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 MRPS24Q96EL2 167 aaKnown RBP9.41□□□□□ -0.9
COL3A1-202ENST00000317840 CNTD2Q9H8S5 307 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 SLC17A5Q9NRA2 495 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 SUSD2Q9UGT4 822 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 KLK13Q9UKR3 277 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 CHD9Q3L8U1 2897 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 TMEM200CA6NKL6 621 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 HSPB2A8KAH6 182 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 CRTAPO75718 401 aaPredicted RBP9.41□□□□□ -0.9
COL3A1-202ENST00000317840 HPP00738 406 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 KLK3P07288 261 aaPredicted RBP9.41□□□□□ -0.9
COL3A1-202ENST00000317840 GLULP15104 373 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 NME1P15531 152 aaKnown RBP9.41□□□□□ -0.9
COL3A1-202ENST00000317840 ABCD3P28288 659 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 MPGP29372 298 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 BIDP55957 195 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 SSBP1Q04837 148 aaKnown RBP9.41□□□□□ -0.9
COL3A1-202ENST00000317840 ELAVL1Q15717 326 aaKnown RBP9.41□□□□□ -0.9
COL3A1-202ENST00000317840 HSPB2Q16082 182 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 NKAPLQ5M9Q1 402 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 SVBPQ8N300 66 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 ZNF283Q8N7M2 679 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 EXD3Q8N9H8 876 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 NAXEQ8NCW5 288 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 WNT2BQ93097 391 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 ARL11Q969Q4 196 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 ZNF524Q96C55 264 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 CRB3Q9BUF7 120 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 PIGMQ9H3S5 423 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 ACKR4Q9NPB9 350 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 PRMT8Q9NR22 394 aaPredicted RBP9.41□□□□□ -0.9
COL3A1-202ENST00000317840 SHISA8B8ZZ34 492 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 LMO7DNF2Z398 122 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 H0YIG0 161 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 PIAS2O75928 621 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 F10P00742 488 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 BGLAPP02818 100 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 HOXB5P09067 269 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 CLRN1P58418 232 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 SLC26A5P58743 744 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 CSRP2Q16527 193 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 SLC22A24Q8N4F4 322 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 NKAIN3Q8N8D7 197 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 EDAQ92838 391 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 ARL5BQ96KC2 179 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 UTP23Q9BRU9 249 aaKnown RBP9.41□□□□□ -0.9
COL3A1-202ENST00000317840 ADAT1Q9BUB4 502 aaKnown RBP9.41□□□□□ -0.9
COL3A1-202ENST00000317840 DNTTIP1Q9H147 329 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 ZNF701Q9NV72 531 aaPredicted RBP9.41□□□□□ -0.9
COL3A1-202ENST00000317840 RASL12Q9NYN1 266 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 PRR13Q9NZ81 148 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 GDF2Q9UK05 429 aaPredicted RBP9.41□□□□□ -0.9
COL3A1-202ENST00000317840 VSIG4Q9Y279 399 aa9.41□□□□□ -0.9
COL3A1-202ENST00000317840 VSTM2BA6NLU5 285 aa9.4□□□□□ -0.9
COL3A1-202ENST00000317840 PATE3B3GLJ2 98 aa9.4□□□□□ -0.9
COL3A1-202ENST00000317840 G3V3Y1 287 aa9.4□□□□□ -0.9
COL3A1-202ENST00000317840 EIF4E2O60573 245 aaKnown RBP9.4□□□□□ -0.9
COL3A1-202ENST00000317840 WDPCPO95876 746 aa9.4□□□□□ -0.9
COL3A1-202ENST00000317840 FOLR1P15328 257 aa9.4□□□□□ -0.9
COL3A1-202ENST00000317840 PSMB6P28072 239 aa9.4□□□□□ -0.9
COL3A1-202ENST00000317840 CASRP41180 1078 aa9.4□□□□□ -0.9
COL3A1-202ENST00000317840 DAP3P51398 398 aaKnown RBP9.4□□□□□ -0.9
COL3A1-202ENST00000317840 KCNRGQ8N5I3 272 aa9.4□□□□□ -0.9
COL3A1-202ENST00000317840 OR51E1Q8TCB6 317 aa9.4□□□□□ -0.9
COL3A1-202ENST00000317840 ELP5Q8TE02 316 aa9.4□□□□□ -0.9
COL3A1-202ENST00000317840 SLC25A28Q96A46 364 aa9.4□□□□□ -0.9
COL3A1-202ENST00000317840 DMRTA2Q96SC8 542 aa9.4□□□□□ -0.9
COL3A1-202ENST00000317840 ALX4Q9H161 411 aaPredicted RBP9.4□□□□□ -0.9
COL3A1-202ENST00000317840 PTGES2Q9H7Z7 377 aa9.4□□□□□ -0.9
COL3A1-202ENST00000317840 METTL7AQ9H8H3 244 aa9.4□□□□□ -0.9
COL3A1-202ENST00000317840 EXOSC3Q9NQT5 275 aaKnown RBP9.4□□□□□ -0.9
COL3A1-202ENST00000317840 TRAV14DV4A0A0A6YYC5 116 aa9.4□□□□□ -0.9
COL3A1-202ENST00000317840 A6NIZ1 184 aa9.4□□□□□ -0.9
COL3A1-202ENST00000317840 OR6C65A6NJZ3 312 aa9.4□□□□□ -0.9
COL3A1-202ENST00000317840 SCGB1D2O95969 90 aa9.4□□□□□ -0.9
COL3A1-202ENST00000317840 IL11P20809 199 aa9.4□□□□□ -0.9
COL3A1-202ENST00000317840 RAP1BP61224 184 aa9.4□□□□□ -0.9
COL3A1-202ENST00000317840 RAP1AP62834 184 aa9.4□□□□□ -0.9
COL3A1-202ENST00000317840 H3F3CQ6NXT2 135 aa9.4□□□□□ -0.9
COL3A1-202ENST00000317840 TMEM71Q6P5X7 295 aa9.4□□□□□ -0.9
COL3A1-202ENST00000317840 CATSPERDQ86XM0 798 aa9.4□□□□□ -0.9
COL3A1-202ENST00000317840 OR5H2Q8NGV7 314 aa9.4□□□□□ -0.9
COL3A1-202ENST00000317840 STOML3Q8TAV4 291 aa9.4□□□□□ -0.9
COL3A1-202ENST00000317840 RHBDD1Q8TEB9 315 aa9.4□□□□□ -0.9
COL3A1-202ENST00000317840 WDR13Q9H1Z4 485 aa9.4□□□□□ -0.9
COL3A1-202ENST00000317840 ZNF768Q9H5H4 540 aaKnown RBP9.4□□□□□ -0.9
COL3A1-202ENST00000317840 VSX1Q9NZR4 365 aaPredicted RBP9.4□□□□□ -0.9
COL3A1-202ENST00000317840 C9orf170A2RU37 121 aa9.4□□□□□ -0.91
COL3A1-202ENST00000317840 SCRG1O75711 98 aa9.4□□□□□ -0.91
COL3A1-202ENST00000317840 TPPPO94811 219 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms