RNA–Protein interactions for RNA: ENST00000316881.8

TRIM25-201, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-201ENST00000316881 TRGV10A0A0A0MS01 117 aa12.94□□□□□ -0.34
TRIM25-201ENST00000316881 PCBP4P57723 403 aaKnown RBP12.94□□□□□ -0.34
TRIM25-201ENST00000316881 NANOGP1Q8N7R0 232 aa12.94□□□□□ -0.34
TRIM25-201ENST00000316881 OR1L3Q8NH93 324 aa12.94□□□□□ -0.34
TRIM25-201ENST00000316881 PBOV1Q9GZY1 135 aa12.94□□□□□ -0.34
TRIM25-201ENST00000316881 ESRP2Q9H6T0 727 aaKnown RBP12.94□□□□□ -0.34
TRIM25-201ENST00000316881 HINT3Q9NQE9 182 aaKnown RBP12.94□□□□□ -0.34
TRIM25-201ENST00000316881 MAP1BP46821 2468 aaKnown RBP12.94□□□□□ -0.34
TRIM25-201ENST00000316881 LAMB2P55268 1798 aa12.94□□□□□ -0.34
TRIM25-201ENST00000316881 STRCQ7RTU9 1775 aa12.94□□□□□ -0.34
TRIM25-201ENST00000316881 TMEM200CA6NKL6 621 aa12.94□□□□□ -0.34
TRIM25-201ENST00000316881 PPM1DO15297 605 aa12.94□□□□□ -0.34
TRIM25-201ENST00000316881 CT45A10P0DMU9 189 aa12.94□□□□□ -0.34
TRIM25-201ENST00000316881 HOXD11P31277 338 aaPredicted RBP12.94□□□□□ -0.34
TRIM25-201ENST00000316881 SIAH3Q8IW03 269 aa12.94□□□□□ -0.34
TRIM25-201ENST00000316881 TMEM99Q8N816 258 aa12.94□□□□□ -0.34
TRIM25-201ENST00000316881 GPBAR1Q8TDU6 330 aa12.94□□□□□ -0.34
TRIM25-201ENST00000316881 ZNF707Q96C28 371 aaPredicted RBP12.94□□□□□ -0.34
TRIM25-201ENST00000316881 ZNF75AQ96N20 296 aa12.94□□□□□ -0.34
TRIM25-201ENST00000316881 SIAEQ9HAT2 523 aa12.94□□□□□ -0.34
TRIM25-201ENST00000316881 PPP1R3CQ9UQK1 317 aa12.94□□□□□ -0.34
TRIM25-201ENST00000316881 ARPC3O15145 178 aa12.94□□□□□ -0.34
TRIM25-201ENST00000316881 TRAF3IP2O43734 574 aaPredicted RBP12.94□□□□□ -0.34
TRIM25-201ENST00000316881 NKX2-1P43699 371 aaPredicted RBP12.94□□□□□ -0.34
TRIM25-201ENST00000316881 CCR9P51686 369 aa12.94□□□□□ -0.34
TRIM25-201ENST00000316881 MC2RQ01718 297 aa12.94□□□□□ -0.34
TRIM25-201ENST00000316881 TMEM92Q6UXU6 159 aa12.94□□□□□ -0.34
TRIM25-201ENST00000316881 CADM3Q8N126 398 aa12.94□□□□□ -0.34
TRIM25-201ENST00000316881 SYS1Q8N2H4 156 aa12.94□□□□□ -0.34
TRIM25-201ENST00000316881 GALNT16Q8N428 558 aa12.94□□□□□ -0.34
TRIM25-201ENST00000316881 VN1R1Q9GZP7 353 aa12.94□□□□□ -0.34
TRIM25-201ENST00000316881 FITM1A5D6W6 292 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 SPRY3O43610 288 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 NXPH3O95157 252 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 PSMB3P49720 205 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 THNSL2Q86YJ6 484 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 NOXO1Q8NFA2 376 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 CNRIP1Q96F85 164 aaPredicted RBP12.93□□□□□ -0.34
TRIM25-201ENST00000316881 LIN7CQ9NUP9 197 aaKnown RBP12.93□□□□□ -0.34
TRIM25-201ENST00000316881 GDF2Q9UK05 429 aaPredicted RBP12.93□□□□□ -0.34
TRIM25-201ENST00000316881 DLEC1Q9Y238 1755 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 SSC5DA1L4H1 1573 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 A0A0A6YYD5 115 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 CISD3P0C7P0 127 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 MGST1P10620 155 aaKnown RBP12.93□□□□□ -0.34
TRIM25-201ENST00000316881 BMP5P22003 454 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 DDOSTP39656 456 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 PPT1P50897 306 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 SSX9Q7RTT3 188 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 ALKBH3Q96Q83 286 aaPredicted RBP12.93□□□□□ -0.34
TRIM25-201ENST00000316881 MYOZ1Q9NP98 299 aaPredicted RBP12.93□□□□□ -0.34
TRIM25-201ENST00000316881 I6L893 689 aaPredicted RBP12.93□□□□□ -0.34
TRIM25-201ENST00000316881 TOX3O15405 576 aaPredicted RBP12.93□□□□□ -0.34
TRIM25-201ENST00000316881 APEHP13798 732 aaKnown RBP12.93□□□□□ -0.34
TRIM25-201ENST00000316881 CNR1P21554 472 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 ZNF85Q03923 595 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 RAB35Q15286 201 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 TMEM179BQ7Z7N9 219 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 UBAC2Q8NBM4 344 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 GABARAPL3Q9BY60 117 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 ZFP64Q9NPA5 681 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 ZNF71Q9NQZ8 489 aaPredicted RBP12.93□□□□□ -0.34
TRIM25-201ENST00000316881 ST8SIA5O15466 376 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 B4GALT3O60512 393 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 DUSP1P28562 367 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 RAB1AP62820 205 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 AQP6Q13520 282 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 FAM219BQ5XKK7 198 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 LINC00299Q6ZSB3 139 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 ADGRG3Q86Y34 549 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 ST8SIA3O43173 380 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 TCRBP04435 133 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 UBE2G1P62253 170 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 HIST2H3PS2Q5TEC6 136 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 TMEM108Q6UXF1 575 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 APOBEC4Q8WW27 367 aaKnown RBP12.93□□□□□ -0.34
TRIM25-201ENST00000316881 GABRG3Q99928 467 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 ZNF385DQ9H6B1 395 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 SERGEFQ9UGK8 458 aa12.93□□□□□ -0.34
TRIM25-201ENST00000316881 TRABD2BA6NFA1 517 aa12.92□□□□□ -0.34
TRIM25-201ENST00000316881 DVL1O14640 695 aa12.92□□□□□ -0.34
TRIM25-201ENST00000316881 BMI1P35226 326 aa12.92□□□□□ -0.34
TRIM25-201ENST00000316881 DVL1P1P54792 670 aaPredicted RBP12.92□□□□□ -0.34
TRIM25-201ENST00000316881 SLC25A26Q70HW3 274 aa12.92□□□□□ -0.34
TRIM25-201ENST00000316881 ADGRF3Q8IZF5 1079 aa12.92□□□□□ -0.34
TRIM25-201ENST00000316881 AQP7O14520 342 aa12.92□□□□□ -0.34
TRIM25-201ENST00000316881 HLA-HP01893 362 aa12.92□□□□□ -0.34
TRIM25-201ENST00000316881 SFTPCP11686 197 aa12.92□□□□□ -0.34
TRIM25-201ENST00000316881 SLC17A1Q14916 467 aa12.92□□□□□ -0.34
TRIM25-201ENST00000316881 SIGLEC11Q96RL6 698 aa12.92□□□□□ -0.34
TRIM25-201ENST00000316881 ZNF251Q9BRH9 671 aa12.92□□□□□ -0.34
TRIM25-201ENST00000316881 PLAC1Q9HBJ0 212 aa12.92□□□□□ -0.34
TRIM25-201ENST00000316881 EXOSC3Q9NQT5 275 aaKnown RBP12.92□□□□□ -0.34
TRIM25-201ENST00000316881 LAMP3Q9UQV4 416 aa12.92□□□□□ -0.34
TRIM25-201ENST00000316881 A0A087WUJ7 227 aa12.92□□□□□ -0.34
TRIM25-201ENST00000316881 K7EQS6 105 aa12.92□□□□□ -0.34
TRIM25-201ENST00000316881 HPNP05981 417 aa12.92□□□□□ -0.34
TRIM25-201ENST00000316881 ABCD3P28288 659 aa12.92□□□□□ -0.34
TRIM25-201ENST00000316881 OXA1LQ15070 435 aa12.92□□□□□ -0.34
TRIM25-201ENST00000316881 TESK1Q15569 626 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms