RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 C17orf47Q8NEP4 570 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 OR1S2Q8NGQ3 325 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 OR1N1Q8NGS0 311 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 THOC3Q96J01 351 aaKnown RBP12.44□□□□□ -0.42
SPAST-201ENST00000315285 NKX6-2Q9C056 277 aaPredicted RBP12.44□□□□□ -0.42
SPAST-201ENST00000315285 SPACA1Q9HBV2 294 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 LRP12Q9Y561 859 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 ARID1AO14497 2285 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 METTL12A8MUP2 240 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 C17orf112F2Z3M2 114 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 HYAL3O43820 417 aaPredicted RBP12.44□□□□□ -0.42
SPAST-201ENST00000315285 RPA2P15927 270 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 TAF9Q16594 264 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 VHLLQ6RSH7 139 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 TEX261Q6UWH6 196 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 GLDNQ6ZMI3 551 aaPredicted RBP12.44□□□□□ -0.42
SPAST-201ENST00000315285 POC1BQ8TC44 478 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 RNF32Q9H0A6 362 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 UBE2ZQ9H832 354 aaPredicted RBP12.44□□□□□ -0.42
SPAST-201ENST00000315285 GPR160Q9UJ42 338 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 FBXL4Q9UKA2 621 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 FOXJ3Q9UPW0 622 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 FLVCR1Q9Y5Y0 555 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 U3KQ87 197 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 DFFBO76075 338 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 OR51H1Q8NH63 302 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 C19orf12Q9NSK7 152 aa12.44□□□□□ -0.42
SPAST-201ENST00000315285 PURGQ9UJV8 347 aaKnown RBP12.44□□□□□ -0.42
SPAST-201ENST00000315285 IL5P05113 134 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 HPNP05981 417 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 ADRB1P08588 477 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 GSTP1P09211 210 aaKnown RBP12.43□□□□□ -0.42
SPAST-201ENST00000315285 PTHLHP12272 177 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 ZNF121P58317 390 aaPredicted RBP12.43□□□□□ -0.42
SPAST-201ENST00000315285 BAXQ07812 192 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 LAIR1Q6GTX8 287 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 KCNIP4Q6PIL6 250 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 OR2G3Q8NGZ4 309 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 RAB39BQ96DA2 213 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 B3GAT1Q9P2W7 334 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 RAB19A4D1S5 217 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 WNT1P04628 370 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 ARL3P36405 182 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 BAMBIQ13145 260 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 TOMM34Q15785 309 aaPredicted RBP12.43□□□□□ -0.42
SPAST-201ENST00000315285 ZNF425Q6IV72 752 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 LFNGQ8NES3 379 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 PPP1R1CQ8WVI7 109 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 AP1S3Q96PC3 154 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 PLEKHF2Q9H8W4 249 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 KPTNQ9Y664 436 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 SLCO1B1Q9Y6L6 691 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 ANKUB1A6NFN9 424 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 C2CD4DB7Z1M9 353 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 ATP6V1G2-DDX39BF2Z307 99 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 OIP5O43482 229 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 GLSO94925 669 aaPredicted RBP12.43□□□□□ -0.42
SPAST-201ENST00000315285 MGMTP16455 207 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 ZNF117Q03924 483 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 FZD2Q14332 565 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 WDR38Q5JTN6 314 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 BRICD5Q6PL45 260 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 OR4D11Q8NGI4 311 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 OR10J5Q8NHC4 309 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 ASB13Q8WXK3 278 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 TWSG1Q9GZX9 223 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 HDGFL3Q9Y3E1 203 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 COL11A2P13942 1736 aaPredicted RBP12.43□□□□□ -0.42
SPAST-201ENST00000315285 NUDT19A8MXV4 375 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 DEGS1O15121 323 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 NRASP01111 189 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 ABCD3P28288 659 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 GZMMP51124 257 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 F2RL1P55085 397 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 TBC1D28Q2M2D7 210 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 CDH26Q8IXH8 852 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 TMEM229BQ8NBD8 167 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 C11orf40Q8WZ69 217 aa12.43□□□□□ -0.42
SPAST-201ENST00000315285 SNCAP37840 140 aa12.42□□□□□ -0.42
SPAST-201ENST00000315285 TOR2AQ5JU69 321 aa12.42□□□□□ -0.42
SPAST-201ENST00000315285 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.42□□□□□ -0.42
SPAST-201ENST00000315285 BARHL1Q9BZE3 327 aa12.42□□□□□ -0.42
SPAST-201ENST00000315285 HAO2Q9NYQ3 351 aa12.42□□□□□ -0.42
SPAST-201ENST00000315285 LRP5LA4QPB2 252 aa12.42□□□□□ -0.42
SPAST-201ENST00000315285 ZNF705GA8MUZ8 300 aaPredicted RBP12.42□□□□□ -0.42
SPAST-201ENST00000315285 DHHO43323 396 aa12.42□□□□□ -0.42
SPAST-201ENST00000315285 NDUFB6O95139 128 aa12.42□□□□□ -0.42
SPAST-201ENST00000315285 CTXN2P0C2S0 81 aa12.42□□□□□ -0.42
SPAST-201ENST00000315285 SMAD4Q13485 552 aaKnown RBP12.42□□□□□ -0.42
SPAST-201ENST00000315285 TMEM71Q6P5X7 295 aa12.42□□□□□ -0.42
SPAST-201ENST00000315285 C6orf15Q6UXA7 325 aaPredicted RBP12.42□□□□□ -0.42
SPAST-201ENST00000315285 BAP18Q8IXM2 172 aa12.42□□□□□ -0.42
SPAST-201ENST00000315285 TDHQ8IZJ6 230 aa12.42□□□□□ -0.42
SPAST-201ENST00000315285 SFT2D1Q8WV19 159 aa12.42□□□□□ -0.42
SPAST-201ENST00000315285 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.42□□□□□ -0.42
SPAST-201ENST00000315285 KCNJ15Q99712 375 aa12.42□□□□□ -0.42
SPAST-201ENST00000315285 TUBAL3A6NHL2 446 aa12.42□□□□□ -0.42
SPAST-201ENST00000315285 HS3ST1O14792 307 aa12.42□□□□□ -0.42
SPAST-201ENST00000315285 CXCL13O43927 109 aa12.42□□□□□ -0.42
SPAST-201ENST00000315285 OR5H8P0DN80 308 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms