RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 LRRC37AA6NMS7 1700 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 SLC30A7Q8NEW0 376 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 HPSE2Q8WWQ2 592 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 OCEL1Q9H607 264 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 SNRNP200O75643 2136 aaKnown RBP12.16□□□□□ -0.46
RFFL-201ENST00000315249 KCNE1BA0A087WTH5 132 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 PCP4L1A6NKN8 68 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 OR1M1Q8NGA1 313 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 ADAT1Q9BUB4 502 aaKnown RBP12.16□□□□□ -0.46
RFFL-201ENST00000315249 SLC38A1Q9H2H9 487 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 SLC22A23A1A5C7 686 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 SSTP61278 116 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 BRICD5Q6PL45 260 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 GABRG1Q8N1C3 465 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 OR2L13Q8N349 312 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 UPK1BO75841 260 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 GLI4P10075 376 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 GALNSP34059 522 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 ETV1P50549 477 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 RSPO4Q2I0M5 234 aaPredicted RBP12.16□□□□□ -0.46
RFFL-201ENST00000315249 D2HGDHQ8N465 521 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 TMEM217Q8N7C4 229 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 DNAJC5GQ8N7S2 189 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 ELMOD3Q96FG2 381 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 FITM1A5D6W6 292 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 CTDSP2O14595 271 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 SMIM21Q3B7S5 101 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 SOWAHCQ53LP3 525 aaPredicted RBP12.16□□□□□ -0.46
RFFL-201ENST00000315249 PRAMEF5Q5TYX0 476 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 PRAMEF6Q5VXH4 476 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 TIGD3Q6B0B8 471 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 PLPPR2Q96GM1 343 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 RASL10BQ96S79 203 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 OR51J1Q9H342 316 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 SPACA1Q9HBV2 294 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 BCL2L10Q9HD36 194 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 A4GNTQ9UNA3 340 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 ZFC3H1O60293 1989 aaKnown RBP12.16□□□□□ -0.46
RFFL-201ENST00000315249 MEX3AA1L020 520 aaKnown RBP12.16□□□□□ -0.46
RFFL-201ENST00000315249 GABRA4P48169 554 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 NPY4RP50391 375 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 LUMP51884 338 aaPredicted RBP12.16□□□□□ -0.46
RFFL-201ENST00000315249 C12orf45Q8N5I9 185 aaPredicted RBP12.16□□□□□ -0.46
RFFL-201ENST00000315249 TSNAXQ99598 290 aaKnown RBP12.16□□□□□ -0.46
RFFL-201ENST00000315249 PLEKHF2Q9H8W4 249 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 TAAR3PQ9P1P4 343 aa12.16□□□□□ -0.46
RFFL-201ENST00000315249 ESPL1Q14674 2120 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 WDR1O75083 606 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 MED6O75586 246 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 RAE1P78406 368 aaKnown RBP12.15□□□□□ -0.46
RFFL-201ENST00000315249 PLXDC2Q6UX71 529 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 S1PR3Q99500 378 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 SSX3Q99909 188 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 SLC22A13Q9Y226 551 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 BRCA1P38398 1863 aaKnown RBP12.15□□□□□ -0.46
RFFL-201ENST00000315249 GVINP1Q7Z2Y8 2422 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 CT62P0C5K7 136 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 CT45A6P0DMU7 189 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 CT45A5P0DMU8 189 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 CT45A7P0DMV0 189 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 CT45A8P0DMV1 189 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 CT45A9P0DMV2 189 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 F2RP25116 425 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 CT45A2Q5DJT8 189 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 CT45A1Q5HYN5 189 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 CT45A3Q8NHU0 189 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 SCN5AQ14524 2016 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 AQP7O14520 342 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 SRD5A2P31213 254 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 OPRM1P35372 400 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 CLVS2Q5SYC1 327 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 LAX1Q8IWV1 398 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 OR2AK2Q8NG84 335 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 OR1F12Q8NHA8 337 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 EXTL1Q92935 676 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 APOBEC3DQ96AK3 386 aaPredicted RBP12.15□□□□□ -0.46
RFFL-201ENST00000315249 CACNA1EQ15878 2313 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 E9PI62 339 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 SPINK2P20155 84 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 SLC36A1Q7Z2H8 476 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 SEC22AQ96IW7 307 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 GIMAP1Q8WWP7 306 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 PINX1Q96BK5 328 aaKnown RBP12.15□□□□□ -0.46
RFFL-201ENST00000315249 FBXO34Q9NWN3 711 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 CD300AQ9UGN4 299 aa12.15□□□□□ -0.46
RFFL-201ENST00000315249 TCF20Q9UGU0 1960 aaKnown RBP12.15□□□□□ -0.47
RFFL-201ENST00000315249 EGR3Q06889 387 aa12.15□□□□□ -0.47
RFFL-201ENST00000315249 TAF9Q16594 264 aa12.15□□□□□ -0.47
RFFL-201ENST00000315249 OPA3Q9H6K4 179 aa12.15□□□□□ -0.47
RFFL-201ENST00000315249 FAM53CQ9NYF3 392 aa12.15□□□□□ -0.47
RFFL-201ENST00000315249 PILRBQ9UKJ0 227 aa12.15□□□□□ -0.47
RFFL-201ENST00000315249 OTOFQ9HC10 1997 aa12.14□□□□□ -0.47
RFFL-201ENST00000315249 WDR90Q96KV7 1748 aa12.14□□□□□ -0.47
RFFL-201ENST00000315249 APEX1P27695 318 aaKnown RBP12.14□□□□□ -0.47
RFFL-201ENST00000315249 FOXL2P58012 376 aa12.14□□□□□ -0.47
RFFL-201ENST00000315249 RTP5Q14D33 572 aa12.14□□□□□ -0.47
RFFL-201ENST00000315249 PCK2Q16822 640 aa12.14□□□□□ -0.47
RFFL-201ENST00000315249 STEAP1BQ6NZ63 245 aa12.14□□□□□ -0.47
RFFL-201ENST00000315249 FAM198BQ6UWH4 519 aa12.14□□□□□ -0.47
RFFL-201ENST00000315249 GINS3Q9BRX5 216 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 157.7 ms