RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 OSMP13725 252 aa12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 HOXB6P17509 224 aaKnown RBP12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 SRD5A1P18405 259 aa12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 PMELP40967 661 aa12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 GINS1Q14691 196 aa12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 FAHD1Q6P587 224 aa12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 PRSS45Q7RTY3 260 aa12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 OR5L1Q8NGL2 311 aa12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 TEX47Q8TBZ9 253 aa12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 SLAMF6Q96DU3 332 aa12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 MEGF10Q96KG7 1140 aa12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 CDADC1Q9BWV3 514 aa12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 GCM1Q9NP62 436 aa12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 HIF1ANQ9NWT6 349 aa12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 STAB1Q9NY15 2570 aa12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 NPTNQ9Y639 398 aa12.3□□□□□ -0.44
PPP1CA-201ENST00000312989 ZNF593O00488 134 aaPredicted RBP12.29□□□□□ -0.44
PPP1CA-201ENST00000312989 PHF1O43189 567 aaPredicted RBP12.29□□□□□ -0.44
PPP1CA-201ENST00000312989 PLPP2O43688 288 aa12.29□□□□□ -0.44
PPP1CA-201ENST00000312989 TIPRLO75663 272 aa12.29□□□□□ -0.44
PPP1CA-201ENST00000312989 SPARCP09486 303 aa12.29□□□□□ -0.44
PPP1CA-201ENST00000312989 ZNF823P16415 610 aa12.29□□□□□ -0.44
PPP1CA-201ENST00000312989 SELEP16581 610 aa12.29□□□□□ -0.44
PPP1CA-201ENST00000312989 SLC2A5P22732 501 aa12.29□□□□□ -0.44
PPP1CA-201ENST00000312989 FMO3P31513 532 aa12.29□□□□□ -0.44
PPP1CA-201ENST00000312989 RAD23AP54725 363 aa12.29□□□□□ -0.44
PPP1CA-201ENST00000312989 ZNF92Q03936 586 aa12.29□□□□□ -0.44
PPP1CA-201ENST00000312989 MAB21L1Q13394 359 aa12.29□□□□□ -0.44
PPP1CA-201ENST00000312989 ZMYND11Q15326 602 aa12.29□□□□□ -0.44
PPP1CA-201ENST00000312989 SLC27A4Q6P1M0 643 aa12.29□□□□□ -0.44
PPP1CA-201ENST00000312989 SHQ1Q6PI26 577 aaKnown RBP12.29□□□□□ -0.44
PPP1CA-201ENST00000312989 GLCCI1Q86VQ1 547 aa12.29□□□□□ -0.44
PPP1CA-201ENST00000312989 REPIN1Q9BWE0 567 aaKnown RBP12.29□□□□□ -0.44
PPP1CA-201ENST00000312989 SLC25A19Q9HC21 320 aa12.29□□□□□ -0.44
PPP1CA-201ENST00000312989 RIIAD1A6NNX1 92 aa12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 F5H0A9 414 aaPredicted RBP12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 F5H5P2 479 aa12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 H3BN98 237 aa12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 TMEM178BH3BS89 294 aa12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 GLCEO94923 617 aa12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 PTBP3O95758 552 aaKnown RBP12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 IFNGP01579 166 aa12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 LCATP04180 440 aa12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 HLA-DPB1P04440 258 aa12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 SLC2A1P11166 492 aa12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 ZNF3P17036 446 aa12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 ZFP36P26651 326 aaKnown RBP12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 DAPP51397 102 aa12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 TPTEP56180 551 aa12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 SEC61A1P61619 476 aaKnown RBP12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 SRSF2Q01130 221 aaKnown RBP12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 GLYATL3Q5SZD4 288 aa12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 TMEM236Q5W0B7 351 aa12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 DRAM2Q6UX65 266 aa12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 PHC2Q8IXK0 858 aa12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 BHLHE23Q8NDY6 225 aa12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 BBS1Q8NFJ9 593 aa12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 OR6K6Q8NGW6 343 aa12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 OR51F2Q8NH61 342 aa12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 OR2AE1Q8NHA4 323 aa12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 RNF133Q8WVZ7 376 aa12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 RAB1CQ92928 201 aa12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 SPSB4Q96A44 273 aa12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 DUS3LQ96G46 650 aaKnown RBP12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 ZNF582Q96NG8 517 aaPredicted RBP12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 KCNJ15Q99712 375 aa12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 TMPRSS13Q9BYE2 586 aa12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 ZNF319Q9P2F9 582 aa12.28□□□□□ -0.44
PPP1CA-201ENST00000312989 IFNA2P01563 188 aa12.27□□□□□ -0.45
PPP1CA-201ENST00000312989 ANXA8P13928 327 aa12.27□□□□□ -0.45
PPP1CA-201ENST00000312989 TNFRSF1AP19438 455 aa12.27□□□□□ -0.45
PPP1CA-201ENST00000312989 OPRL1P41146 370 aa12.27□□□□□ -0.45
PPP1CA-201ENST00000312989 GATA4P43694 442 aa12.27□□□□□ -0.45
PPP1CA-201ENST00000312989 HOXA4Q00056 320 aaPredicted RBP12.27□□□□□ -0.45
PPP1CA-201ENST00000312989 SLC3A1Q07837 685 aa12.27□□□□□ -0.45
PPP1CA-201ENST00000312989 KRTAP24-1Q3LI83 254 aa12.27□□□□□ -0.45
PPP1CA-201ENST00000312989 TMEM155Q4W5P6 130 aa12.27□□□□□ -0.45
PPP1CA-201ENST00000312989 PLBD1Q6P4A8 553 aa12.27□□□□□ -0.45
PPP1CA-201ENST00000312989 DPY19L4Q7Z388 723 aa12.27□□□□□ -0.45
PPP1CA-201ENST00000312989 LRRC28Q86X40 367 aaPredicted RBP12.27□□□□□ -0.45
PPP1CA-201ENST00000312989 OR13G1Q8NGZ3 307 aa12.27□□□□□ -0.45
PPP1CA-201ENST00000312989 ZNF420Q8TAQ5 688 aaPredicted RBP12.27□□□□□ -0.45
PPP1CA-201ENST00000312989 SPTSSAQ969W0 71 aa12.27□□□□□ -0.45
PPP1CA-201ENST00000312989 NRBF2Q96F24 287 aa12.27□□□□□ -0.45
PPP1CA-201ENST00000312989 TIMD4Q96H15 378 aa12.27□□□□□ -0.45
PPP1CA-201ENST00000312989 ABHD6Q9BV23 337 aa12.27□□□□□ -0.45
PPP1CA-201ENST00000312989 OPN4Q9UHM6 478 aa12.27□□□□□ -0.45
PPP1CA-201ENST00000312989 PPP1R3CQ9UQK1 317 aa12.27□□□□□ -0.45
PPP1CA-201ENST00000312989 KLHDC2Q9Y2U9 406 aa12.27□□□□□ -0.45
PPP1CA-201ENST00000312989 TRAV20A0A0B4J274 112 aa12.26□□□□□ -0.45
PPP1CA-201ENST00000312989 IGHV3-64DA0A0J9YX35 117 aa12.26□□□□□ -0.45
PPP1CA-201ENST00000312989 CCDC182A6NF36 153 aa12.26□□□□□ -0.45
PPP1CA-201ENST00000312989 CD300LBA8K4G0 201 aa12.26□□□□□ -0.45
PPP1CA-201ENST00000312989 ZNF878C9JN71 531 aa12.26□□□□□ -0.45
PPP1CA-201ENST00000312989 GNGT2O14610 69 aa12.26□□□□□ -0.45
PPP1CA-201ENST00000312989 E2F6O75461 281 aa12.26□□□□□ -0.45
PPP1CA-201ENST00000312989 FSHBP01225 129 aa12.26□□□□□ -0.45
PPP1CA-201ENST00000312989 TNFSF4P23510 183 aa12.26□□□□□ -0.45
PPP1CA-201ENST00000312989 POU1F1P28069 291 aa12.26□□□□□ -0.45
PPP1CA-201ENST00000312989 EPHA2P29317 976 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms