RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 PELI1Q96FA3 418 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 ZNF768Q9H5H4 540 aaKnown RBP2.89□□□□□ -1.95
CLOCK-201ENST00000309964 VSX1Q9NZR4 365 aaPredicted RBP2.89□□□□□ -1.95
CLOCK-201ENST00000309964 ACTL7AQ9Y615 435 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 KCNMB2Q9Y691 235 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 VWA8A3KMH1 1905 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 ZNF705EA8MWA4 302 aaPredicted RBP2.89□□□□□ -1.95
CLOCK-201ENST00000309964 UPK1BO75841 260 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 PRR35P0CG20 571 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 TMIGD3P0DMS9 266 aaPredicted RBP2.89□□□□□ -1.95
CLOCK-201ENST00000309964 GZMHP20718 246 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 CLDN6P56747 220 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 FOXK2Q01167 660 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 HABP2Q14520 560 aaPredicted RBP2.89□□□□□ -1.95
CLOCK-201ENST00000309964 CCSAPQ6IQ19 270 aaPredicted RBP2.89□□□□□ -1.95
CLOCK-201ENST00000309964 FAHD1Q6P587 224 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 INO80CQ6PI98 192 aaPredicted RBP2.89□□□□□ -1.95
CLOCK-201ENST00000309964 C17orf107Q6ZR85 190 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 ANGPTL5Q86XS5 388 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 CYB561A3Q8NBI2 242 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 OR9Q2Q8NGE9 314 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 ZNF649Q9BS31 505 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 SOX7Q9BT81 388 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 DIMT1Q9UNQ2 313 aaKnown RBP2.89□□□□□ -1.95
CLOCK-201ENST00000309964 TMEM30CPA0ZSE6 113 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 ZNF785A8K8V0 405 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 CDX4O14627 284 aaPredicted RBP2.89□□□□□ -1.95
CLOCK-201ENST00000309964 RRASP10301 218 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 HLA-DOBP13765 273 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 PSMB1P20618 241 aaKnown RBP2.89□□□□□ -1.95
CLOCK-201ENST00000309964 CNR1P21554 472 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 PTPN6P29350 595 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 ETV5P41161 510 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 NKX6-1P78426 367 aaPredicted RBP2.89□□□□□ -1.95
CLOCK-201ENST00000309964 OLIG2Q13516 323 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 SPRED3Q2MJR0 410 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 KHDC1LQ5JSQ8 128 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 SLC23A3Q6PIS1 610 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 CDHR3Q6ZTQ4 885 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 TCTEX1D1Q8N7M0 179 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 ANKRD53Q8N9V6 530 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 SLC16A11Q8NCK7 471 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 ZBTB34Q8NCN2 500 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 OR2T35Q8NGX2 323 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 GMPPAQ96IJ6 420 aaPredicted RBP2.89□□□□□ -1.95
CLOCK-201ENST00000309964 ARV1Q9H2C2 271 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 UBQLN3Q9H347 655 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 TMEM210A6NLX4 147 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 KRBOX1C9JBD0 128 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 CORTO00230 105 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 PRKRAO75569 313 aaKnown RBP2.89□□□□□ -1.95
CLOCK-201ENST00000309964 CFDP00746 253 aaPredicted RBP2.89□□□□□ -1.95
CLOCK-201ENST00000309964 THBS4P35443 961 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 NXPH1P58417 271 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 STARD6P59095 220 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 RPS25P62851 125 aaKnown RBP2.89□□□□□ -1.95
CLOCK-201ENST00000309964 FLI1Q01543 452 aaPredicted RBP2.89□□□□□ -1.95
CLOCK-201ENST00000309964 NFATC3Q12968 1075 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 LRRC37A5PQ49AS3 106 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 ZNF574Q6ZN55 896 aaPredicted RBP2.89□□□□□ -1.95
CLOCK-201ENST00000309964 RHOUQ7L0Q8 258 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 RTN4RL1Q86UN2 441 aaPredicted RBP2.89□□□□□ -1.95
CLOCK-201ENST00000309964 TMEM151AQ8N4L1 468 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 NHLRC2Q8NBF2 726 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 ABHD4Q8TB40 342 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 ZNF596Q8TC21 504 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 TCTEX1D2Q8WW35 142 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 SORT1Q99523 831 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 CNTNAP3Q9BZ76 1288 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 ZNF436Q9C0F3 470 aaPredicted RBP2.89□□□□□ -1.95
CLOCK-201ENST00000309964 OR2S2Q9NQN1 319 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 SIRT3Q9NTG7 399 aaPredicted RBP2.89□□□□□ -1.95
CLOCK-201ENST00000309964 RBFOX1Q9NWB1 397 aaKnown RBP2.89□□□□□ -1.95
CLOCK-201ENST00000309964 R4GMQ9 66 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 DYSFO75923 2080 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 IGHV1OR21-1A0A087WYE8 117 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 TRABD2BA6NFA1 517 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 C1orf196B1AJZ1 125 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 AURKAO14965 403 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 HRO43593 1189 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 DHRS3O75911 302 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 FAM87AP0C7U9 286 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 SLC2A1P11166 492 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 PRKACGP22612 351 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 CHATP28329 748 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 HOXA6P31267 233 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 SOX18P35713 384 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 PHC1P78364 1004 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 ZXDAP98168 799 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 POU4F3Q15319 338 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 DUSP5Q16690 384 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 TBRG1Q3YBR2 411 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 RPS26P11Q5JNZ5 115 aaPredicted RBP2.89□□□□□ -1.95
CLOCK-201ENST00000309964 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.89□□□□□ -1.95
CLOCK-201ENST00000309964 GLYATL3Q5SZD4 288 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 CCBE1Q6UXH8 406 aaPredicted RBP2.89□□□□□ -1.95
CLOCK-201ENST00000309964 LACC1Q8IV20 430 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 D2HGDHQ8N465 521 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 SUMF2Q8NBJ7 301 aa2.89□□□□□ -1.95
CLOCK-201ENST00000309964 OR51F2Q8NH61 342 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms