RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 HNRNPA0Q13151 305 aaKnown RBP7.78□□□□□ -1.16
PDE4D-201ENST00000309641 EFNB3Q15768 340 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 DEFB113Q30KQ7 82 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 ZNF679Q8IYX0 411 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 OR52I1Q8NGK6 324 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 SYNPRQ8TBG9 265 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 FBLIM1Q8WUP2 373 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 APOBEC3DQ96AK3 386 aaPredicted RBP7.78□□□□□ -1.16
PDE4D-201ENST00000309641 CMBLQ96DG6 245 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 PERPQ96FX8 193 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 ZNF649Q9BS31 505 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 FAIMQ9NVQ4 179 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 ITGB1BP2Q9UKP3 347 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 IKZF2Q9UKS7 526 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 EXOGQ9Y2C4 368 aaKnown RBP7.78□□□□□ -1.16
PDE4D-201ENST00000309641 B9A039 149 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 ZNF670-ZNF695F2Z2N8 137 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 ANXA2P07355 339 aaKnown RBP7.78□□□□□ -1.16
PDE4D-201ENST00000309641 OR2T7P0C7T2 308 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 NAT2P11245 290 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 KLF3P57682 345 aaPredicted RBP7.78□□□□□ -1.16
PDE4D-201ENST00000309641 RPS23P62266 143 aaKnown RBP7.78□□□□□ -1.16
PDE4D-201ENST00000309641 GRB2P62993 217 aaKnown RBP7.78□□□□□ -1.16
PDE4D-201ENST00000309641 ZNF92Q03936 586 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 MFGE8Q08431 387 aaPredicted RBP7.78□□□□□ -1.16
PDE4D-201ENST00000309641 POU4F2Q12837 409 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 TMED1Q13445 227 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 IL18R1Q13478 541 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 GK2Q14410 553 aaPredicted RBP7.78□□□□□ -1.16
PDE4D-201ENST00000309641 ZNF718Q3SXZ3 478 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 GLYATL3Q5SZD4 288 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 ZNF684Q5T5D7 378 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 ARL9Q6T311 187 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 DRAM2Q6UX65 266 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 FAM57BQ71RH2 274 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 RHOUQ7L0Q8 258 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 THAP5Q7Z6K1 395 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 LHFPL3Q86UP9 236 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.78□□□□□ -1.16
PDE4D-201ENST00000309641 SETD9Q8NE22 299 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 OR2T27Q8NH04 317 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 SGCDQ92629 289 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 PIGTQ969N2 578 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 RNF166Q96A37 237 aaPredicted RBP7.78□□□□□ -1.16
PDE4D-201ENST00000309641 Q96MT0 163 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 DCLRE1CQ96SD1 692 aaKnown RBP7.78□□□□□ -1.16
PDE4D-201ENST00000309641 SOX7Q9BT81 388 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 TPK1Q9H3S4 243 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 TAAR3PQ9P1P4 343 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 TMEM14AQ9Y6G1 99 aa7.78□□□□□ -1.16
PDE4D-201ENST00000309641 ZANQ9Y493 2812 aa7.77□□□□□ -1.17
PDE4D-201ENST00000309641 SRSF10O75494 262 aaKnown RBP7.77□□□□□ -1.17
PDE4D-201ENST00000309641 IGHV3-13P01766 116 aa7.77□□□□□ -1.17
PDE4D-201ENST00000309641 OR12D2P58182 307 aa7.77□□□□□ -1.17
PDE4D-201ENST00000309641 GFOD2Q3B7J2 385 aa7.77□□□□□ -1.17
PDE4D-201ENST00000309641 TP53I3Q53FA7 332 aa7.77□□□□□ -1.17
PDE4D-201ENST00000309641 MBNL2Q5VZF2 373 aaKnown RBP7.77□□□□□ -1.17
PDE4D-201ENST00000309641 OR2T2Q6IF00 324 aa7.77□□□□□ -1.17
PDE4D-201ENST00000309641 KRTAP1-3Q8IUG1 177 aa7.77□□□□□ -1.17
PDE4D-201ENST00000309641 OR5AS1Q8N127 324 aa7.77□□□□□ -1.17
PDE4D-201ENST00000309641 BHLHE23Q8NDY6 225 aa7.77□□□□□ -1.17
PDE4D-201ENST00000309641 OR8B12Q8NGG6 310 aa7.77□□□□□ -1.17
PDE4D-201ENST00000309641 ASB17Q8WXJ9 295 aa7.77□□□□□ -1.17
PDE4D-201ENST00000309641 SORCS2Q96PQ0 1159 aa7.77□□□□□ -1.17
PDE4D-201ENST00000309641 VRK1Q99986 396 aaPredicted RBP7.77□□□□□ -1.17
PDE4D-201ENST00000309641 MROQ9BYG7 248 aa7.77□□□□□ -1.17
PDE4D-201ENST00000309641 VCX3BQ9H321 246 aa7.77□□□□□ -1.17
PDE4D-201ENST00000309641 MSL2Q9HCI7 577 aa7.77□□□□□ -1.17
PDE4D-201ENST00000309641 ZNF701Q9NV72 531 aaPredicted RBP7.77□□□□□ -1.17
PDE4D-201ENST00000309641 MRPS18AQ9NVS2 196 aaKnown RBP7.77□□□□□ -1.17
PDE4D-201ENST00000309641 FAM206AQ9NX38 181 aa7.77□□□□□ -1.17
PDE4D-201ENST00000309641 A0A1W2PPW3 197 aa7.76□□□□□ -1.17
PDE4D-201ENST00000309641 ZSCAN5BA6NJL1 495 aa7.76□□□□□ -1.17
PDE4D-201ENST00000309641 TBX1O43435 398 aa7.76□□□□□ -1.17
PDE4D-201ENST00000309641 RPP14O95059 124 aaKnown RBP7.76□□□□□ -1.17
PDE4D-201ENST00000309641 IGHV4-39P01824 125 aa7.76□□□□□ -1.17
PDE4D-201ENST00000309641 GCH1P30793 250 aa7.76□□□□□ -1.17
PDE4D-201ENST00000309641 PSMB10P40306 273 aa7.76□□□□□ -1.17
PDE4D-201ENST00000309641 PTH2RP49190 550 aa7.76□□□□□ -1.17
PDE4D-201ENST00000309641 RGS6P49758 472 aa7.76□□□□□ -1.17
PDE4D-201ENST00000309641 MMP15P51511 669 aa7.76□□□□□ -1.17
PDE4D-201ENST00000309641 RIDAP52758 137 aaKnown RBP7.76□□□□□ -1.17
PDE4D-201ENST00000309641 SNRPD2P62316 118 aaKnown RBP7.76□□□□□ -1.17
PDE4D-201ENST00000309641 SPRNQ5BIV9 151 aa7.76□□□□□ -1.17
PDE4D-201ENST00000309641 LIPNQ5VXI9 398 aa7.76□□□□□ -1.17
PDE4D-201ENST00000309641 KCTD18Q6PI47 426 aaPredicted RBP7.76□□□□□ -1.17
PDE4D-201ENST00000309641 FBXW12Q6X9E4 464 aa7.76□□□□□ -1.17
PDE4D-201ENST00000309641 Q6ZR03 302 aa7.76□□□□□ -1.17
PDE4D-201ENST00000309641 ACBD7Q8N6N7 88 aa7.76□□□□□ -1.17
PDE4D-201ENST00000309641 BPIFB6Q8NFQ5 453 aa7.76□□□□□ -1.17
PDE4D-201ENST00000309641 GGHQ92820 318 aa7.76□□□□□ -1.17
PDE4D-201ENST00000309641 NINJ1Q92982 152 aa7.76□□□□□ -1.17
PDE4D-201ENST00000309641 SGK3Q96BR1 496 aa7.76□□□□□ -1.17
PDE4D-201ENST00000309641 HAVCR1Q96D42 359 aa7.76□□□□□ -1.17
PDE4D-201ENST00000309641 MBD6Q96DN6 1003 aa7.76□□□□□ -1.17
PDE4D-201ENST00000309641 ANKRD60Q9BZ19 345 aa7.76□□□□□ -1.17
PDE4D-201ENST00000309641 CXorf56Q9H5V9 222 aa7.76□□□□□ -1.17
PDE4D-201ENST00000309641 PPP1R3EQ9H7J1 279 aa7.76□□□□□ -1.17
PDE4D-201ENST00000309641 ISG20L2Q9H9L3 353 aaKnown RBP7.76□□□□□ -1.17
PDE4D-201ENST00000309641 ACOXLQ9NUZ1 547 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms