RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 MT-ND1P03886 318 aa7.26□□□□□ -1.25
CHD6-201ENST00000309279 CRHP06850 196 aa7.26□□□□□ -1.25
CHD6-201ENST00000309279 RAP2AP10114 183 aa7.26□□□□□ -1.25
CHD6-201ENST00000309279 FPR1P21462 350 aa7.26□□□□□ -1.25
CHD6-201ENST00000309279 LIMS1P48059 325 aa7.26□□□□□ -1.25
CHD6-201ENST00000309279 HMGA2P52926 109 aa7.26□□□□□ -1.25
CHD6-201ENST00000309279 FLI1Q01543 452 aaPredicted RBP7.26□□□□□ -1.25
CHD6-201ENST00000309279 CHRNB3Q05901 458 aa7.26□□□□□ -1.25
CHD6-201ENST00000309279 TRAM2Q15035 370 aa7.26□□□□□ -1.25
CHD6-201ENST00000309279 OR2A2Q6IF42 318 aa7.26□□□□□ -1.25
CHD6-201ENST00000309279 PAQR6Q6TCH4 344 aa7.26□□□□□ -1.25
CHD6-201ENST00000309279 PLXDC2Q6UX71 529 aa7.26□□□□□ -1.25
CHD6-201ENST00000309279 SLC16A12Q6ZSM3 486 aa7.26□□□□□ -1.25
CHD6-201ENST00000309279 FCRLAQ7L513 359 aa7.26□□□□□ -1.25
CHD6-201ENST00000309279 FAM219AQ8IW50 185 aa7.26□□□□□ -1.25
CHD6-201ENST00000309279 RNF113BQ8IZP6 322 aaKnown RBP7.26□□□□□ -1.25
CHD6-201ENST00000309279 PAPD5Q8NDF8 572 aaKnown RBP7.26□□□□□ -1.25
CHD6-201ENST00000309279 KCNG3Q8TAE7 436 aa7.26□□□□□ -1.25
CHD6-201ENST00000309279 TMEM255BQ8WV15 326 aa7.26□□□□□ -1.25
CHD6-201ENST00000309279 CANT1Q8WVQ1 401 aa7.26□□□□□ -1.25
CHD6-201ENST00000309279 TMEM239Q8WW34 195 aa7.26□□□□□ -1.25
CHD6-201ENST00000309279 UBE2FQ969M7 185 aa7.26□□□□□ -1.25
CHD6-201ENST00000309279 ELMOD3Q96FG2 381 aa7.26□□□□□ -1.25
CHD6-201ENST00000309279 BSCL2Q96G97 398 aaPredicted RBP7.26□□□□□ -1.25
CHD6-201ENST00000309279 ZNF347Q96SE7 839 aa7.26□□□□□ -1.25
CHD6-201ENST00000309279 PRRT1Q99946 306 aa7.26□□□□□ -1.25
CHD6-201ENST00000309279 ADI1Q9BV57 179 aa7.26□□□□□ -1.25
CHD6-201ENST00000309279 MYOZ1Q9NP98 299 aaPredicted RBP7.26□□□□□ -1.25
CHD6-201ENST00000309279 MEPEQ9NQ76 525 aaPredicted RBP7.26□□□□□ -1.25
CHD6-201ENST00000309279 FAIMQ9NVQ4 179 aa7.26□□□□□ -1.25
CHD6-201ENST00000309279 RDH8Q9NYR8 311 aa7.26□□□□□ -1.25
CHD6-201ENST00000309279 RHCGQ9UBD6 479 aa7.26□□□□□ -1.25
CHD6-201ENST00000309279 ZNF629Q9UEG4 869 aaPredicted RBP7.26□□□□□ -1.25
CHD6-201ENST00000309279 Q9UFV3 132 aa7.26□□□□□ -1.25
CHD6-201ENST00000309279 ING1Q9UK53 422 aaPredicted RBP7.26□□□□□ -1.25
CHD6-201ENST00000309279 CACNA1CQ13936 2221 aa7.26□□□□□ -1.25
CHD6-201ENST00000309279 FREM1Q5H8C1 2179 aa7.25□□□□□ -1.25
CHD6-201ENST00000309279 SPTAN1Q13813 2472 aaKnown RBP7.25□□□□□ -1.25
CHD6-201ENST00000309279 IGKV3D-15A0A087WSY6 115 aa7.25□□□□□ -1.25
CHD6-201ENST00000309279 HSPB2A8KAH6 182 aa7.25□□□□□ -1.25
CHD6-201ENST00000309279 ZNF814B7Z6K7 855 aa7.25□□□□□ -1.25
CHD6-201ENST00000309279 MCIDASD6RGH6 385 aa7.25□□□□□ -1.25
CHD6-201ENST00000309279 SLC31A2O15432 143 aa7.25□□□□□ -1.25
CHD6-201ENST00000309279 TNFSF13O75888 250 aa7.25□□□□□ -1.25
CHD6-201ENST00000309279 DIRAS1O95057 198 aa7.25□□□□□ -1.25
CHD6-201ENST00000309279 LY86O95711 162 aa7.25□□□□□ -1.25
CHD6-201ENST00000309279 IL18BPO95998 194 aa7.25□□□□□ -1.25
CHD6-201ENST00000309279 BGLAPP02818 100 aa7.25□□□□□ -1.25
CHD6-201ENST00000309279 H1F0P07305 194 aaKnown RBP7.25□□□□□ -1.25
CHD6-201ENST00000309279 CELA3BP08861 270 aa7.25□□□□□ -1.25
CHD6-201ENST00000309279 PCMT1P22061 227 aa7.25□□□□□ -1.25
CHD6-201ENST00000309279 MAS1LP35410 378 aa7.25□□□□□ -1.25
CHD6-201ENST00000309279 HOXA1P49639 335 aaPredicted RBP7.25□□□□□ -1.25
CHD6-201ENST00000309279 CNN1P51911 297 aaKnown RBP7.25□□□□□ -1.25
CHD6-201ENST00000309279 UGT2B15P54855 530 aa7.25□□□□□ -1.25
CHD6-201ENST00000309279 OR2B6P58173 313 aa7.25□□□□□ -1.25
CHD6-201ENST00000309279 LTBQ06643 244 aa7.25□□□□□ -1.25
CHD6-201ENST00000309279 RNPS1Q15287 305 aaKnown RBP7.25□□□□□ -1.25
CHD6-201ENST00000309279 OR7A5Q15622 319 aa7.25□□□□□ -1.25
CHD6-201ENST00000309279 HSPB2Q16082 182 aa7.25□□□□□ -1.25
CHD6-201ENST00000309279 PSG3Q16557 428 aa7.25□□□□□ -1.25
CHD6-201ENST00000309279 ZNF74Q16587 644 aa7.25□□□□□ -1.25
CHD6-201ENST00000309279 XKRXQ6PP77 449 aa7.25□□□□□ -1.25
CHD6-201ENST00000309279 P4HA3Q7Z4N8 544 aa7.25□□□□□ -1.25
CHD6-201ENST00000309279 GPR141Q7Z602 305 aa7.25□□□□□ -1.25
CHD6-201ENST00000309279 FAM90A1Q86YD7 464 aa7.25□□□□□ -1.25
CHD6-201ENST00000309279 NANPQ8TBE9 248 aa7.25□□□□□ -1.25
CHD6-201ENST00000309279 SLC7A13Q8TCU3 470 aa7.25□□□□□ -1.25
CHD6-201ENST00000309279 ACOT11Q8WXI4 607 aaPredicted RBP7.25□□□□□ -1.25
CHD6-201ENST00000309279 ZHX1-C8orf76Q96EF9 292 aa7.25□□□□□ -1.25
CHD6-201ENST00000309279 DNAJA3Q96EY1 480 aa7.25□□□□□ -1.25
CHD6-201ENST00000309279 GMPPAQ96IJ6 420 aaPredicted RBP7.25□□□□□ -1.25
CHD6-201ENST00000309279 TAPBPLQ9BX59 468 aa7.25□□□□□ -1.25
CHD6-201ENST00000309279 YAE1D1Q9NRH1 226 aa7.25□□□□□ -1.25
CHD6-201ENST00000309279 RNF6Q9Y252 685 aa7.25□□□□□ -1.25
CHD6-201ENST00000309279 B3GALT5Q9Y2C3 310 aa7.25□□□□□ -1.25
CHD6-201ENST00000309279 USP9YO00507 2555 aaPredicted RBP7.25□□□□□ -1.25
CHD6-201ENST00000309279 UTP20O75691 2785 aaKnown RBP7.25□□□□□ -1.25
CHD6-201ENST00000309279 A0A087WUU8 490 aa7.24□□□□□ -1.25
CHD6-201ENST00000309279 IGHV3-15A0A0B4J1V0 119 aa7.24□□□□□ -1.25
CHD6-201ENST00000309279 LOC102725191A0A1B0GVB3 256 aa7.24□□□□□ -1.25
CHD6-201ENST00000309279 CBY3A6NI87 242 aa7.24□□□□□ -1.25
CHD6-201ENST00000309279 AQP7P3A6NL99 342 aa7.24□□□□□ -1.25
CHD6-201ENST00000309279 ZNF724A8MTY0 619 aa7.24□□□□□ -1.25
CHD6-201ENST00000309279 ZG16O60844 167 aa7.24□□□□□ -1.25
CHD6-201ENST00000309279 SS18L1O75177 396 aaPredicted RBP7.24□□□□□ -1.25
CHD6-201ENST00000309279 AGFG2O95081 481 aa7.24□□□□□ -1.25
CHD6-201ENST00000309279 BCL10O95999 233 aa7.24□□□□□ -1.25
CHD6-201ENST00000309279 ASAH2BP0C7U1 165 aa7.24□□□□□ -1.25
CHD6-201ENST00000309279 KLK2P20151 261 aa7.24□□□□□ -1.25
CHD6-201ENST00000309279 GSTM3P21266 225 aa7.24□□□□□ -1.25
CHD6-201ENST00000309279 CHRNB4P30926 498 aa7.24□□□□□ -1.25
CHD6-201ENST00000309279 OPRM1P35372 400 aa7.24□□□□□ -1.25
CHD6-201ENST00000309279 KIR2DL2P43627 348 aaPredicted RBP7.24□□□□□ -1.25
CHD6-201ENST00000309279 CTBP2P56545 445 aa7.24□□□□□ -1.25
CHD6-201ENST00000309279 SMIM11AP58511 58 aa7.24□□□□□ -1.25
CHD6-201ENST00000309279 ERVS71-1P61550 626 aa7.24□□□□□ -1.25
CHD6-201ENST00000309279 FOXF2Q12947 444 aa7.24□□□□□ -1.25
CHD6-201ENST00000309279 PPP1R8Q12972 351 aaKnown RBP7.24□□□□□ -1.25
CHD6-201ENST00000309279 SLC17A1Q14916 467 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms