RNA–Protein interactions for RNA: ENST00000307179.8

USP8-201, Transcript of ubiquitin specific peptidase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP8, Length 4,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-201ENST00000307179 VSX1Q9NZR4 365 aaPredicted RBP4.82□□□□□ -1.64
USP8-201ENST00000307179 SLC5A6Q9Y289 635 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 PRKAB1Q9Y478 270 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 A0A087X0M5 115 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 TRBV23-1A0A0A0MS06 115 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 A0A1B0GX30 115 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 hCG_1809904A0A1W2PP81 198 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 A0A1W2PR64 198 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 A0A1W2PRV1 198 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 M0QZK8 103 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 LATO43561 262 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 OR10H2O60403 315 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 GGCTO75223 188 aaKnown RBP4.82□□□□□ -1.64
USP8-201ENST00000307179 MOSPD3O75425 235 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 GCGP01275 180 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 ZNF888P0CJ79 500 aaPredicted RBP4.82□□□□□ -1.64
USP8-201ENST00000307179 GALNSP34059 522 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 GABRA3P34903 492 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 CDKN2AP42771 156 aaKnown RBP4.82□□□□□ -1.64
USP8-201ENST00000307179 LSSP48449 732 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 CAMLGP49069 296 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 CLDN2P57739 230 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 PLAURQ03405 335 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 KIR2DS3Q14952 304 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 GLYATL3Q5SZD4 288 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 DNM1P34Q6PK57 102 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 DLK2Q6UY11 383 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 ZNF574Q6ZN55 896 aaPredicted RBP4.82□□□□□ -1.64
USP8-201ENST00000307179 LHFPL1Q86WI0 220 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 HIST3H2BBQ8N257 126 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 HSD17B11Q8NBQ5 300 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 CASTOR1Q8WTX7 329 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 SLC25A43Q8WUT9 341 aaPredicted RBP4.82□□□□□ -1.64
USP8-201ENST00000307179 ZNF558Q96NG5 402 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 NDUFAF3Q9BU61 184 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 ACTR3CQ9C0K3 210 aaPredicted RBP4.82□□□□□ -1.64
USP8-201ENST00000307179 PHPT1Q9NRX4 125 aaPredicted RBP4.82□□□□□ -1.64
USP8-201ENST00000307179 C14orf166Q9Y224 244 aaKnown RBP4.82□□□□□ -1.64
USP8-201ENST00000307179 PIGBOS1A0A0B4J2F0 54 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 MEIS3P1A6NDR6 274 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 SERINC4A6NH21 518 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 RRP8O43159 456 aaKnown RBP4.82□□□□□ -1.64
USP8-201ENST00000307179 ZNF354AO60765 605 aaPredicted RBP4.82□□□□□ -1.64
USP8-201ENST00000307179 NME1P15531 152 aaKnown RBP4.82□□□□□ -1.64
USP8-201ENST00000307179 AKR1C4P17516 323 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 HRH1P35367 487 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 AFF3P51826 1226 aaKnown RBP4.82□□□□□ -1.64
USP8-201ENST00000307179 H3F3AP84243 136 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 ENPP2Q13822 863 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 IL13RA2Q14627 380 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 RSU1Q15404 277 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 MIDNQ504T8 468 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 SOHLH1Q5JUK2 328 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 RPL7L1Q6DKI1 246 aaKnown RBP4.82□□□□□ -1.64
USP8-201ENST00000307179 SLC39A11Q8N1S5 342 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 OR13C3Q8NGS6 347 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 HPSE2Q8WWQ2 592 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 ARRDC3Q96B67 414 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 SLC25A44Q96H78 314 aaPredicted RBP4.82□□□□□ -1.64
USP8-201ENST00000307179 PRRX2Q99811 253 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 CCDC3Q9BQI4 270 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 ELOVL3Q9HB03 270 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 DKKL1Q9UK85 242 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 PITPNC1Q9UKF7 332 aa4.82□□□□□ -1.64
USP8-201ENST00000307179 LAMA2P24043 3122 aaKnown RBP4.81□□□□□ -1.64
USP8-201ENST00000307179 TMEM269A0A1B0GVZ9 245 aa4.81□□□□□ -1.64
USP8-201ENST00000307179 SMCO3A2RU48 225 aa4.81□□□□□ -1.64
USP8-201ENST00000307179 DCTN6O00399 190 aa4.81□□□□□ -1.64
USP8-201ENST00000307179 XKRYO14609 159 aa4.81□□□□□ -1.64
USP8-201ENST00000307179 SRSF10O75494 262 aaKnown RBP4.81□□□□□ -1.64
USP8-201ENST00000307179 CXCL14O95715 111 aa4.81□□□□□ -1.64
USP8-201ENST00000307179 ADH1CP00326 375 aa4.81□□□□□ -1.64
USP8-201ENST00000307179 HBE1P02100 147 aa4.81□□□□□ -1.64
USP8-201ENST00000307179 HSPB1P04792 205 aaKnown RBP4.81□□□□□ -1.64
USP8-201ENST00000307179 F13BP05160 661 aa4.81□□□□□ -1.64
USP8-201ENST00000307179 CRABP1P29762 137 aa4.81□□□□□ -1.64
USP8-201ENST00000307179 EMDP50402 254 aa4.81□□□□□ -1.64
USP8-201ENST00000307179 SEC13P55735 322 aa4.81□□□□□ -1.64
USP8-201ENST00000307179 RAB38P57729 211 aa4.81□□□□□ -1.64
USP8-201ENST00000307179 CTXN1P60606 82 aa4.81□□□□□ -1.64
USP8-201ENST00000307179 QRFPP83859 136 aa4.81□□□□□ -1.64
USP8-201ENST00000307179 MGAT2Q10469 447 aa4.81□□□□□ -1.64
USP8-201ENST00000307179 ERV3-1Q14264 604 aa4.81□□□□□ -1.64
USP8-201ENST00000307179 UBE2V2Q15819 145 aa4.81□□□□□ -1.64
USP8-201ENST00000307179 ZNF77Q15935 545 aa4.81□□□□□ -1.64
USP8-201ENST00000307179 C14orf28Q4W4Y0 310 aa4.81□□□□□ -1.64
USP8-201ENST00000307179 RPUSD3Q6P087 351 aaKnown RBP4.81□□□□□ -1.64
USP8-201ENST00000307179 ZNF529Q6P280 563 aa4.81□□□□□ -1.64
USP8-201ENST00000307179 CLEC18BQ6UXF7 455 aa4.81□□□□□ -1.64
USP8-201ENST00000307179 ATG4DQ86TL0 474 aaPredicted RBP4.81□□□□□ -1.64
USP8-201ENST00000307179 GKN2Q86XP6 184 aa4.81□□□□□ -1.64
USP8-201ENST00000307179 C1orf87Q8N0U7 546 aa4.81□□□□□ -1.64
USP8-201ENST00000307179 C2orf73Q8N5S3 287 aaPredicted RBP4.81□□□□□ -1.64
USP8-201ENST00000307179 OR51L1Q8NGJ5 315 aa4.81□□□□□ -1.64
USP8-201ENST00000307179 OR5H2Q8NGV7 314 aa4.81□□□□□ -1.64
USP8-201ENST00000307179 ZNF563Q8TA94 476 aa4.81□□□□□ -1.64
USP8-201ENST00000307179 FNDC9Q8TBE3 224 aa4.81□□□□□ -1.64
USP8-201ENST00000307179 TRIM43Q96BQ3 446 aaPredicted RBP4.81□□□□□ -1.64
USP8-201ENST00000307179 SLC25A36Q96CQ1 311 aa4.81□□□□□ -1.64
USP8-201ENST00000307179 RBMXL1Q96E39 390 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms