RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 ROM1Q03395 351 aa19.17■□□□□ 0.66
HOXD4-201ENST00000306324 RAB40BQ12829 278 aa19.17■□□□□ 0.66
HOXD4-201ENST00000306324 SWI5Q1ZZU3 235 aa19.17■□□□□ 0.66
HOXD4-201ENST00000306324 C11orf71Q6IPW1 123 aa19.17■□□□□ 0.66
HOXD4-201ENST00000306324 DEGS2Q6QHC5 323 aa19.17■□□□□ 0.66
HOXD4-201ENST00000306324 IGFBPL1Q8WX77 278 aa19.17■□□□□ 0.66
HOXD4-201ENST00000306324 NINJ1Q92982 152 aa19.17■□□□□ 0.66
HOXD4-201ENST00000306324 CACNG6Q9BXT2 260 aa19.17■□□□□ 0.66
HOXD4-201ENST00000306324 MYEF2Q9P2K5 600 aaKnown RBP19.17■□□□□ 0.66
HOXD4-201ENST00000306324 PCDHGB1Q9Y5G3 927 aa19.17■□□□□ 0.66
HOXD4-201ENST00000306324 CCDC168Q8NDH2 2452 aa19.17■□□□□ 0.66
HOXD4-201ENST00000306324 TMEM129A0AVI4 362 aa19.16■□□□□ 0.66
HOXD4-201ENST00000306324 DAPL1A0PJW8 107 aa19.16■□□□□ 0.66
HOXD4-201ENST00000306324 FADS2O95864 444 aaKnown RBP19.16■□□□□ 0.66
HOXD4-201ENST00000306324 TUBG1P23258 451 aa19.16■□□□□ 0.66
HOXD4-201ENST00000306324 RIDAP52758 137 aaKnown RBP19.16■□□□□ 0.66
HOXD4-201ENST00000306324 ZNF121P58317 390 aaPredicted RBP19.16■□□□□ 0.66
HOXD4-201ENST00000306324 EGR3Q06889 387 aa19.16■□□□□ 0.66
HOXD4-201ENST00000306324 SNAI3Q3KNW1 292 aa19.16■□□□□ 0.66
HOXD4-201ENST00000306324 KLHL22Q53GT1 634 aa19.16■□□□□ 0.66
HOXD4-201ENST00000306324 NIPAL2Q9H841 368 aa19.16■□□□□ 0.66
HOXD4-201ENST00000306324 TUBG2Q9NRH3 451 aa19.16■□□□□ 0.66
HOXD4-201ENST00000306324 MYRFQ9Y2G1 1151 aa19.16■□□□□ 0.66
HOXD4-201ENST00000306324 J3QRE1 110 aa19.16■□□□□ 0.66
HOXD4-201ENST00000306324 TBX1O43435 398 aa19.16■□□□□ 0.66
HOXD4-201ENST00000306324 ZNF254O75437 659 aa19.16■□□□□ 0.66
HOXD4-201ENST00000306324 KRT8P05787 483 aa19.16■□□□□ 0.66
HOXD4-201ENST00000306324 ANOS1P23352 680 aa19.16■□□□□ 0.66
HOXD4-201ENST00000306324 EVX1P49640 407 aa19.16■□□□□ 0.66
HOXD4-201ENST00000306324 ZNF85Q03923 595 aa19.16■□□□□ 0.66
HOXD4-201ENST00000306324 MALLQ13021 153 aa19.16■□□□□ 0.66
HOXD4-201ENST00000306324 HLXQ14774 488 aaPredicted RBP19.16■□□□□ 0.66
HOXD4-201ENST00000306324 MBNL2Q5VZF2 373 aaKnown RBP19.16■□□□□ 0.66
HOXD4-201ENST00000306324 FAM57BQ71RH2 274 aa19.16■□□□□ 0.66
HOXD4-201ENST00000306324 ACBD7Q8N6N7 88 aa19.16■□□□□ 0.66
HOXD4-201ENST00000306324 OR52I1Q8NGK6 324 aa19.16■□□□□ 0.66
HOXD4-201ENST00000306324 FBLIM1Q8WUP2 373 aa19.16■□□□□ 0.66
HOXD4-201ENST00000306324 SNX33Q8WV41 574 aa19.16■□□□□ 0.66
HOXD4-201ENST00000306324 ZNF184Q99676 751 aaPredicted RBP19.16■□□□□ 0.66
HOXD4-201ENST00000306324 ANKRD60Q9BZ19 345 aa19.16■□□□□ 0.66
HOXD4-201ENST00000306324 DYNLRB1Q9NP97 96 aa19.16■□□□□ 0.66
HOXD4-201ENST00000306324 MRPS18AQ9NVS2 196 aaKnown RBP19.16■□□□□ 0.66
HOXD4-201ENST00000306324 PMF1-BGLAPU3KQ54 211 aa19.16■□□□□ 0.66
HOXD4-201ENST00000306324 CHD3Q12873 2000 aaKnown RBP19.15■□□□□ 0.66
HOXD4-201ENST00000306324 TEX15Q9BXT5 2789 aa19.15■□□□□ 0.66
HOXD4-201ENST00000306324 MAP1AP78559 2803 aaPredicted RBP19.15■□□□□ 0.66
HOXD4-201ENST00000306324 IGLV3-9A0A075B6K5 115 aa19.15■□□□□ 0.66
HOXD4-201ENST00000306324 H3BSA7 217 aa19.15■□□□□ 0.66
HOXD4-201ENST00000306324 PSMA6P60900 246 aaKnown RBP19.15■□□□□ 0.66
HOXD4-201ENST00000306324 ALKBH6Q3KRA9 238 aa19.15■□□□□ 0.66
HOXD4-201ENST00000306324 PLEKHG7Q6ZR37 379 aa19.15■□□□□ 0.66
HOXD4-201ENST00000306324 YIPF7Q8N8F6 280 aa19.15■□□□□ 0.66
HOXD4-201ENST00000306324 CMBLQ96DG6 245 aa19.15■□□□□ 0.66
HOXD4-201ENST00000306324 SP140LQ9H930 580 aa19.15■□□□□ 0.66
HOXD4-201ENST00000306324 TAAR3PQ9P1P4 343 aa19.15■□□□□ 0.66
HOXD4-201ENST00000306324 MRM2Q9UI43 246 aaKnown RBP19.15■□□□□ 0.66
HOXD4-201ENST00000306324 RAB26Q9ULW5 256 aa19.15■□□□□ 0.66
HOXD4-201ENST00000306324 C5orf63A6NC05 138 aa19.14■□□□□ 0.65
HOXD4-201ENST00000306324 OVOL3O00110 214 aa19.14■□□□□ 0.65
HOXD4-201ENST00000306324 IGHV3-13P01766 116 aa19.14■□□□□ 0.65
HOXD4-201ENST00000306324 MYF6P23409 242 aa19.14■□□□□ 0.65
HOXD4-201ENST00000306324 ALDH3B1P43353 468 aa19.14■□□□□ 0.65
HOXD4-201ENST00000306324 PSG7Q13046 419 aa19.14■□□□□ 0.65
HOXD4-201ENST00000306324 NKPD1Q17RQ9 610 aa19.14■□□□□ 0.65
HOXD4-201ENST00000306324 DEFB113Q30KQ7 82 aa19.14■□□□□ 0.65
HOXD4-201ENST00000306324 LAIR2Q6ISS4 152 aa19.14■□□□□ 0.65
HOXD4-201ENST00000306324 BPIFB6Q8NFQ5 453 aa19.14■□□□□ 0.65
HOXD4-201ENST00000306324 OR2AE1Q8NHA4 323 aa19.14■□□□□ 0.65
HOXD4-201ENST00000306324 PGAM5Q96HS1 289 aa19.14■□□□□ 0.65
HOXD4-201ENST00000306324 CNBD2Q96M20 576 aa19.14■□□□□ 0.65
HOXD4-201ENST00000306324 RHNO1Q9BSD3 238 aa19.14■□□□□ 0.65
HOXD4-201ENST00000306324 BEX4Q9NWD9 120 aaPredicted RBP19.14■□□□□ 0.65
HOXD4-201ENST00000306324 TMEM269A0A1B0GVZ9 245 aa19.13■□□□□ 0.65
HOXD4-201ENST00000306324 M0R233 179 aa19.13■□□□□ 0.65
HOXD4-201ENST00000306324 XPNPEP2O43895 674 aa19.13■□□□□ 0.65
HOXD4-201ENST00000306324 FAM20BO75063 409 aa19.13■□□□□ 0.65
HOXD4-201ENST00000306324 PRSS12P56730 875 aa19.13■□□□□ 0.65
HOXD4-201ENST00000306324 ZNF829Q3KNS6 432 aaPredicted RBP19.13■□□□□ 0.65
HOXD4-201ENST00000306324 TMEM255AQ5JRV8 349 aa19.13■□□□□ 0.65
HOXD4-201ENST00000306324 FBXW12Q6X9E4 464 aa19.13■□□□□ 0.65
HOXD4-201ENST00000306324 PRSS45Q7RTY3 260 aa19.13■□□□□ 0.65
HOXD4-201ENST00000306324 LHFPL3Q86UP9 236 aa19.13■□□□□ 0.65
HOXD4-201ENST00000306324 MBD6Q96DN6 1003 aa19.13■□□□□ 0.65
HOXD4-201ENST00000306324 PERPQ96FX8 193 aa19.13■□□□□ 0.65
HOXD4-201ENST00000306324 VRK1Q99986 396 aaPredicted RBP19.13■□□□□ 0.65
HOXD4-201ENST00000306324 GPR160Q9UJ42 338 aa19.13■□□□□ 0.65
HOXD4-201ENST00000306324 GNG8Q9UK08 70 aa19.13■□□□□ 0.65
HOXD4-201ENST00000306324 IRGMA1A4Y4 181 aa19.12■□□□□ 0.65
HOXD4-201ENST00000306324 METTL15A6NJ78 407 aa19.12■□□□□ 0.65
HOXD4-201ENST00000306324 TIMM8AO60220 97 aaPredicted RBP19.12■□□□□ 0.65
HOXD4-201ENST00000306324 SULT1C4O75897 302 aa19.12■□□□□ 0.65
HOXD4-201ENST00000306324 RPP14O95059 124 aaKnown RBP19.12■□□□□ 0.65
HOXD4-201ENST00000306324 IGHA1P01876 353 aa19.12■□□□□ 0.65
HOXD4-201ENST00000306324 ADRA2AP08913 450 aa19.12■□□□□ 0.65
HOXD4-201ENST00000306324 RAC2P15153 192 aa19.12■□□□□ 0.65
HOXD4-201ENST00000306324 DCTDP32321 178 aa19.12■□□□□ 0.65
HOXD4-201ENST00000306324 GK2Q14410 553 aaPredicted RBP19.12■□□□□ 0.65
HOXD4-201ENST00000306324 TIGD6Q17RP2 521 aa19.12■□□□□ 0.65
HOXD4-201ENST00000306324 GFOD2Q3B7J2 385 aa19.12■□□□□ 0.65
HOXD4-201ENST00000306324 TP53I3Q53FA7 332 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms