RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 OR52N4Q8NGI2 321 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 UTP23Q9BRU9 249 aaKnown RBP5.76□□□□□ -1.49
USP47-201ENST00000305481 NIPAL2Q9H841 368 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 CNTD2Q9H8S5 307 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 MYEF2Q9P2K5 600 aaKnown RBP5.76□□□□□ -1.49
USP47-201ENST00000305481 SLC5A6Q9Y289 635 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 HPNP05981 417 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 ABOP16442 354 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 CD83Q01151 205 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 GUCA2AQ02747 115 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 TAF13Q15543 124 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 RSPO4Q2I0M5 234 aaPredicted RBP5.76□□□□□ -1.49
USP47-201ENST00000305481 SFRP4Q6FHJ7 346 aaPredicted RBP5.76□□□□□ -1.49
USP47-201ENST00000305481 OR10K2Q6IF99 312 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 FAAP20Q6NZ36 180 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 OR6M1Q8NGM8 313 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 INTS12Q96CB8 462 aaKnown RBP5.76□□□□□ -1.49
USP47-201ENST00000305481 SCMH1Q96GD3 660 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 RNF170Q96K19 258 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 ULBP2Q9BZM5 246 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 FAM117AQ9C073 453 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 DPAGT1Q9H3H5 408 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 GHITMQ9H3K2 345 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 NEK6Q9HC98 313 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 GPR84Q9NQS5 396 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 CDV3Q9UKY7 258 aaKnown RBP5.76□□□□□ -1.49
USP47-201ENST00000305481 BOKQ9UMX3 212 aaPredicted RBP5.76□□□□□ -1.49
USP47-201ENST00000305481 TRAV18A0A075B6X5 111 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 MEGF11A6BM72 1044 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 CENPXA8MT69 81 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 ACOT7O00154 380 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 FTH1P19P0C7X4 201 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 CCL1P22362 96 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 LHX2P50458 406 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 MRPS10P82664 201 aaKnown RBP5.76□□□□□ -1.49
USP47-201ENST00000305481 FAM57BQ71RH2 274 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 LUZP2Q86TE4 346 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 LILRB2Q8N423 598 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 PAQR4Q8N4S7 273 aaPredicted RBP5.76□□□□□ -1.49
USP47-201ENST00000305481 JAGN1Q8N5M9 183 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 IL22RA1Q8N6P7 574 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 OR1M1Q8NGA1 313 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 ABHD3Q8WU67 409 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 LYZL4Q96KX0 146 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 C7orf50Q9BRJ6 194 aaKnown RBP5.76□□□□□ -1.49
USP47-201ENST00000305481 TTTY12Q9BZ98 90 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 B3GNT4Q9C0J1 378 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 ATG5Q9H1Y0 275 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 MOB1AQ9H8S9 216 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 CRLF2Q9HC73 371 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 SLC17A5Q9NRA2 495 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 ZMAT5Q9UDW3 170 aaKnown RBP5.76□□□□□ -1.49
USP47-201ENST00000305481 NUBP2Q9Y5Y2 271 aa5.76□□□□□ -1.49
USP47-201ENST00000305481 LAMA5O15230 3695 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 C7orf66A4D0T2 115 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 WIPF3A6NGB9 483 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 FAM166BA8MTA8 275 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 IGLV3-1P01715 115 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 ALDOBP05062 364 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 DBHP09172 617 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 NR2C1P13056 603 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 GABRA1P14867 456 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 OTX1P32242 354 aaPredicted RBP5.75□□□□□ -1.49
USP47-201ENST00000305481 GNALP38405 381 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 MAGEA5P43359 124 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 CLDN18P56856 261 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 ARPC4P59998 168 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 RRAS2P62070 204 aaPredicted RBP5.75□□□□□ -1.49
USP47-201ENST00000305481 GRB2P62993 217 aaKnown RBP5.75□□□□□ -1.49
USP47-201ENST00000305481 MRPS34P82930 218 aaKnown RBP5.75□□□□□ -1.49
USP47-201ENST00000305481 MOGAT2Q3SYC2 334 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 FAM27BQ5VT28 67 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.75□□□□□ -1.49
USP47-201ENST00000305481 ABHD12BQ7Z5M8 362 aaPredicted RBP5.75□□□□□ -1.49
USP47-201ENST00000305481 GJC3Q8NFK1 279 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 MS4A3Q96HJ5 214 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 MCUBQ9NWR8 336 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 ELF5Q9UKW6 265 aaPredicted RBP5.75□□□□□ -1.49
USP47-201ENST00000305481 A0A1B0GVI7 797 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 CDRT15L2A8MXV6 281 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 H7C417 338 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 CYTIPO60759 359 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 ECDO95905 644 aaPredicted RBP5.75□□□□□ -1.49
USP47-201ENST00000305481 BDKRB2P30411 391 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 CASRP41180 1078 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 GUCA1AP43080 201 aaPredicted RBP5.75□□□□□ -1.49
USP47-201ENST00000305481 QRFPP83859 136 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 SRSF6Q13247 344 aaKnown RBP5.75□□□□□ -1.49
USP47-201ENST00000305481 BTN2A1Q7KYR7 527 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 OR5AS1Q8N127 324 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 ZNF283Q8N7M2 679 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 NKAIN3Q8N8D7 197 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 MDS2Q8NDY4 140 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 OR5D14Q8NGL3 314 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 OR13C9Q8NGT0 318 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 GAL3ST1Q99999 423 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 SLC6A15Q9H2J7 730 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 TMEM138Q9NPI0 162 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 MTFP1Q9UDX5 166 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 FLVCR2Q9UPI3 526 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms