RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 S100A7AQ86SG5 101 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 NT5CQ8TCD5 201 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 RLN3Q8WXF3 142 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 PELI1Q96FA3 418 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 FBXO4Q9UKT5 387 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.64□□□□□ -0.55
COL3A1-201ENST00000304636 A0A1B0GX78 115 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 OR5H8P0DN80 308 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 NQO2P16083 231 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 AVPR2P30518 371 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 CDKN3Q16667 212 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 CATSPERDQ86XM0 798 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 TTC9Q92623 222 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 LINC00862A6NCI5 91 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 SSSCA1O60232 199 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 QDPRP09417 244 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 MVDP53602 400 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 PCBP4P57723 403 aaKnown RBP11.64□□□□□ -0.55
COL3A1-201ENST00000304636 ENDOGQ14249 297 aaKnown RBP11.64□□□□□ -0.55
COL3A1-201ENST00000304636 FAM58AQ8N1B3 248 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 OR13H1Q8NG92 308 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 WDR34Q96EX3 536 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 NUDT9Q9BW91 350 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 CTDSPLO15194 276 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 GSTZ1O43708 216 aaPredicted RBP11.64□□□□□ -0.55
COL3A1-201ENST00000304636 VAMP5O95183 116 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 OR8U8P0C7N1 319 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 GABRA2P47869 451 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 SLC25A1P53007 311 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 ADPRHP54922 357 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 OR2T2Q6IF00 324 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 LHFPL2Q6ZUX7 228 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 OR51H1Q8NH63 302 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 ST8SIA1Q92185 356 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 ABHD1Q96SE0 405 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 ADGRL4Q9HBW9 690 aa11.64□□□□□ -0.55
COL3A1-201ENST00000304636 A0A0B4J2E0 115 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 A0A1B0GX12 115 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 C2orf72A6NCS6 295 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 NXPH2O95156 264 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 CST4P01036 141 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 IRF3Q14653 427 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 LCN15Q6UWW0 184 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 ZNF683Q8IZ20 524 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 OTOSQ8NHW6 89 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 RXFP4Q8TDU9 374 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 TMEM18Q96B42 140 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 MRPL38Q96DV4 380 aaKnown RBP11.63□□□□□ -0.55
COL3A1-201ENST00000304636 SPACA5Q96QH8 159 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 OR8B4Q96RC9 309 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 RYDENQ9NUL5 291 aaKnown RBP11.63□□□□□ -0.55
COL3A1-201ENST00000304636 PPIL1Q9Y3C6 166 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 ECM29Q5VYK3 1845 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 A0A087WUJ7 227 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 ANKRD20A5PA0PJZ0 165 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 LAMTOR5O43504 91 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 OR51I2Q9H344 312 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 HEYLQ9NQ87 328 aaPredicted RBP11.63□□□□□ -0.55
COL3A1-201ENST00000304636 SLCO1B1Q9Y6L6 691 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 PRRT4C9JH25 899 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 ICOSLGO75144 302 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 IGHEP01854 428 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 RD3LP0DJH9 198 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 RPA2P15927 270 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 PIGPP57054 158 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 AARDQ4LEZ3 155 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 ZNF787Q6DD87 383 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 LRRTM1Q86UE6 522 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 FAM185AQ8N0U4 392 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 OR51F2Q8NH61 342 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 MIXL1Q9H2W2 232 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 BTAF1O14981 1849 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 USP54Q70EL1 1684 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 TRBV5-3A0A0A0MS03 114 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 RAB27BO00194 218 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 FABP1P07148 127 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 MGST1P10620 155 aaKnown RBP11.63□□□□□ -0.55
COL3A1-201ENST00000304636 B3GAT1Q9P2W7 334 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 ING1Q9UK53 422 aaPredicted RBP11.63□□□□□ -0.55
COL3A1-201ENST00000304636 NUP205Q92621 2012 aa11.63□□□□□ -0.55
COL3A1-201ENST00000304636 ALOX12BO75342 701 aa11.62□□□□□ -0.55
COL3A1-201ENST00000304636 GLI4P10075 376 aa11.62□□□□□ -0.55
COL3A1-201ENST00000304636 PXNP49023 591 aaPredicted RBP11.62□□□□□ -0.55
COL3A1-201ENST00000304636 DHODHQ02127 395 aa11.62□□□□□ -0.55
COL3A1-201ENST00000304636 PHYHD1Q5SRE7 291 aa11.62□□□□□ -0.55
COL3A1-201ENST00000304636 NKAIN2Q5VXU1 208 aa11.62□□□□□ -0.55
COL3A1-201ENST00000304636 CLEC9AQ6UXN8 241 aa11.62□□□□□ -0.55
COL3A1-201ENST00000304636 FBXL6Q8N531 539 aa11.62□□□□□ -0.55
COL3A1-201ENST00000304636 OR4S1Q8NGB4 309 aa11.62□□□□□ -0.55
COL3A1-201ENST00000304636 OR5V1Q9UGF6 321 aa11.62□□□□□ -0.55
COL3A1-201ENST00000304636 TRAV20A0A0B4J274 112 aa11.62□□□□□ -0.55
COL3A1-201ENST00000304636 SERPINE3A8MV23 424 aa11.62□□□□□ -0.55
COL3A1-201ENST00000304636 DHRS2Q13268 280 aa11.62□□□□□ -0.55
COL3A1-201ENST00000304636 RTN4IP1Q8WWV3 396 aaPredicted RBP11.62□□□□□ -0.55
COL3A1-201ENST00000304636 LINC00052Q96N35 136 aa11.62□□□□□ -0.55
COL3A1-201ENST00000304636 PRDM7Q9NQW5 492 aa11.62□□□□□ -0.55
COL3A1-201ENST00000304636 DEGS1O15121 323 aa11.62□□□□□ -0.55
COL3A1-201ENST00000304636 SIGLEC6O43699 453 aa11.62□□□□□ -0.55
COL3A1-201ENST00000304636 FPR2P25090 351 aa11.62□□□□□ -0.55
COL3A1-201ENST00000304636 DVL1P1P54792 670 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms