RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 FAM53BQ14153 422 aa12.63□□□□□ -0.39
PRKCB-201ENST00000303531 HIST2H3AQ71DI3 136 aa12.63□□□□□ -0.39
PRKCB-201ENST00000303531 NT5CQ8TCD5 201 aa12.63□□□□□ -0.39
PRKCB-201ENST00000303531 PHF7Q9BWX1 381 aaPredicted RBP12.63□□□□□ -0.39
PRKCB-201ENST00000303531 A0A1W2PPC4 97 aa12.63□□□□□ -0.39
PRKCB-201ENST00000303531 C20orf202A1L168 122 aa12.63□□□□□ -0.39
PRKCB-201ENST00000303531 OR2W5A6NFC9 320 aa12.63□□□□□ -0.39
PRKCB-201ENST00000303531 SPNP16150 400 aa12.63□□□□□ -0.39
PRKCB-201ENST00000303531 MARCH1Q8TCQ1 289 aa12.63□□□□□ -0.39
PRKCB-201ENST00000303531 TMEM231Q9H6L2 316 aa12.63□□□□□ -0.39
PRKCB-201ENST00000303531 CRLF2Q9HC73 371 aa12.63□□□□□ -0.39
PRKCB-201ENST00000303531 ZNF816-ZNF321PA0A0X1KG74 233 aa12.63□□□□□ -0.39
PRKCB-201ENST00000303531 AQP7O14520 342 aa12.63□□□□□ -0.39
PRKCB-201ENST00000303531 PPM1DO15297 605 aa12.63□□□□□ -0.39
PRKCB-201ENST00000303531 ADRB1P08588 477 aa12.63□□□□□ -0.39
PRKCB-201ENST00000303531 AGFG1P52594 562 aaKnown RBP12.63□□□□□ -0.39
PRKCB-201ENST00000303531 KIAA0141Q14154 515 aaPredicted RBP12.63□□□□□ -0.39
PRKCB-201ENST00000303531 TAF9Q16594 264 aa12.63□□□□□ -0.39
PRKCB-201ENST00000303531 ZNF321PQ8N8H1 164 aa12.63□□□□□ -0.39
PRKCB-201ENST00000303531 CMTM2Q8TAZ6 248 aa12.63□□□□□ -0.39
PRKCB-201ENST00000303531 SLC17A4Q9Y2C5 497 aa12.63□□□□□ -0.39
PRKCB-201ENST00000303531 WDR1O75083 606 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 OR10J4P0C629 311 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 CD80P33681 288 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 RELL2Q8NC24 303 aaPredicted RBP12.62□□□□□ -0.39
PRKCB-201ENST00000303531 MRGPRX4Q96LA9 322 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 SHARPINQ9H0F6 387 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 POLDIP2Q9Y2S7 368 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 ECM29Q5VYK3 1845 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 A0A087WZY1 265 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 TMEM11P17152 192 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 EXOSC2Q13868 293 aaKnown RBP12.62□□□□□ -0.39
PRKCB-201ENST00000303531 HES1Q14469 280 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 C1orf87Q8N0U7 546 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 OR2AK2Q8NG84 335 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 MED9Q9NWA0 146 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 KLK11Q9UBX7 282 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 TBX21Q9UL17 535 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 FER1L6Q2WGJ9 1857 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 SNRPGP15A8MWD9 76 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 SHBQ15464 509 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 FXNQ16595 210 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 HAGHQ16775 308 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 SLC23A1Q9UHI7 598 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 METAP1P53582 386 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 OR2B11Q5JQS5 317 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 FOXQ1Q9C009 403 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 RIMS4Q9H426 269 aaPredicted RBP12.62□□□□□ -0.39
PRKCB-201ENST00000303531 SIRT5Q9NXA8 310 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 MTCH1Q9NZJ7 389 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 ZGLP1P0C6A0 271 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 RPL12P30050 165 aaKnown RBP12.62□□□□□ -0.39
PRKCB-201ENST00000303531 SPANXN5Q5MJ07 72 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 TMEM268Q5VZI3 342 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 NUDT19A8MXV4 375 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 TNFSF11O14788 317 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 SH2D1BO14796 132 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 CXCL13O43927 109 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 HOXD11P31277 338 aaPredicted RBP12.62□□□□□ -0.39
PRKCB-201ENST00000303531 PXDC1Q5TGL8 231 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 GPR119Q8TDV5 335 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 B9D1Q9UPM9 204 aa12.62□□□□□ -0.39
PRKCB-201ENST00000303531 UMAD1C9J7I0 102 aa12.61□□□□□ -0.39
PRKCB-201ENST00000303531 C12orf73Q69YU5 71 aa12.61□□□□□ -0.39
PRKCB-201ENST00000303531 ZNF705AQ6ZN79 300 aaPredicted RBP12.61□□□□□ -0.39
PRKCB-201ENST00000303531 Q6ZRG5 221 aa12.61□□□□□ -0.39
PRKCB-201ENST00000303531 OR52B4Q8NGK2 314 aa12.61□□□□□ -0.39
PRKCB-201ENST00000303531 ARHGDIGQ99819 225 aa12.61□□□□□ -0.39
PRKCB-201ENST00000303531 GDF2Q9UK05 429 aaPredicted RBP12.61□□□□□ -0.39
PRKCB-201ENST00000303531 TRAV1-2A0A0B4J238 106 aa12.61□□□□□ -0.39
PRKCB-201ENST00000303531 OR2C1O95371 312 aa12.61□□□□□ -0.39
PRKCB-201ENST00000303531 RAE1P78406 368 aaKnown RBP12.61□□□□□ -0.39
PRKCB-201ENST00000303531 OR4C16Q8NGL9 310 aa12.61□□□□□ -0.39
PRKCB-201ENST00000303531 C2CD4CQ8TF44 421 aa12.61□□□□□ -0.39
PRKCB-201ENST00000303531 ST8SIA4Q92187 359 aa12.61□□□□□ -0.39
PRKCB-201ENST00000303531 OR2A14Q96R47 310 aa12.61□□□□□ -0.39
PRKCB-201ENST00000303531 POMT2Q9UKY4 750 aa12.61□□□□□ -0.39
PRKCB-201ENST00000303531 ZNF354AO60765 605 aaPredicted RBP12.61□□□□□ -0.39
PRKCB-201ENST00000303531 FOSL1P15407 271 aa12.61□□□□□ -0.39
PRKCB-201ENST00000303531 ARR3P36575 388 aa12.61□□□□□ -0.39
PRKCB-201ENST00000303531 DUSP2Q05923 314 aa12.61□□□□□ -0.39
PRKCB-201ENST00000303531 SSX9Q7RTT3 188 aa12.61□□□□□ -0.39
PRKCB-201ENST00000303531 H0Y8G0 127 aa12.61□□□□□ -0.39
PRKCB-201ENST00000303531 TLE1Q04724 770 aa12.61□□□□□ -0.39
PRKCB-201ENST00000303531 ZNF628Q5EBL2 1059 aa12.61□□□□□ -0.39
PRKCB-201ENST00000303531 FGF14Q92915 247 aa12.61□□□□□ -0.39
PRKCB-201ENST00000303531 DCTN6O00399 190 aa12.61□□□□□ -0.39
PRKCB-201ENST00000303531 APOA2P02652 100 aa12.61□□□□□ -0.39
PRKCB-201ENST00000303531 LGALS4P56470 323 aa12.61□□□□□ -0.39
PRKCB-201ENST00000303531 KIR2DL3P43628 341 aa12.61□□□□□ -0.39
PRKCB-201ENST00000303531 ZFP62Q8NB50 900 aaPredicted RBP12.61□□□□□ -0.39
PRKCB-201ENST00000303531 SMIM4Q8WVI0 70 aa12.61□□□□□ -0.39
PRKCB-201ENST00000303531 APH1BQ8WW43 257 aa12.61□□□□□ -0.39
PRKCB-201ENST00000303531 MENTQ9BUN1 341 aa12.61□□□□□ -0.39
PRKCB-201ENST00000303531 MYO7AQ13402 2215 aa12.61□□□□□ -0.39
PRKCB-201ENST00000303531 TBPP20226 339 aa12.6□□□□□ -0.39
PRKCB-201ENST00000303531 ZNF121P58317 390 aaPredicted RBP12.6□□□□□ -0.39
PRKCB-201ENST00000303531 FOXF1Q12946 379 aa12.6□□□□□ -0.39
PRKCB-201ENST00000303531 GNPNAT1Q96EK6 184 aaPredicted RBP12.6□□□□□ -0.39
PRKCB-201ENST00000303531 XRCC2O43543 280 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms