RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 SOD3P08294 240 aa21.04■□□□□ 0.96
HOXC9-201ENST00000303450 DCKP27707 260 aa21.04■□□□□ 0.96
HOXC9-201ENST00000303450 GCH1P30793 250 aa21.04■□□□□ 0.96
HOXC9-201ENST00000303450 DCTDP32321 178 aa21.04■□□□□ 0.96
HOXC9-201ENST00000303450 SELENOVP59797 346 aa21.04■□□□□ 0.96
HOXC9-201ENST00000303450 MSMPQ1L6U9 139 aa21.04■□□□□ 0.96
HOXC9-201ENST00000303450 PAMR1Q6UXH9 720 aa21.04■□□□□ 0.96
HOXC9-201ENST00000303450 LHFPL3Q86UP9 236 aa21.04■□□□□ 0.96
HOXC9-201ENST00000303450 MRPL48Q96GC5 212 aaKnown RBP21.04■□□□□ 0.96
HOXC9-201ENST00000303450 CCL19Q99731 98 aa21.04■□□□□ 0.96
HOXC9-201ENST00000303450 MRPL37Q9BZE1 423 aaKnown RBP21.04■□□□□ 0.96
HOXC9-201ENST00000303450 CNOT2Q9NZN8 540 aaKnown RBP21.04■□□□□ 0.96
HOXC9-201ENST00000303450 PSORS1C1Q9UIG5 152 aa21.04■□□□□ 0.96
HOXC9-201ENST00000303450 ITPR2Q14571 2701 aa21.03■□□□□ 0.96
HOXC9-201ENST00000303450 METTL15A6NJ78 407 aa21.03■□□□□ 0.96
HOXC9-201ENST00000303450 B9A039 149 aa21.03■□□□□ 0.96
HOXC9-201ENST00000303450 DENRO43583 198 aaKnown RBP21.03■□□□□ 0.96
HOXC9-201ENST00000303450 SULT1C4O75897 302 aa21.03■□□□□ 0.96
HOXC9-201ENST00000303450 ZNF250P15622 560 aa21.03■□□□□ 0.96
HOXC9-201ENST00000303450 PSMA6P60900 246 aaKnown RBP21.03■□□□□ 0.96
HOXC9-201ENST00000303450 MALLQ13021 153 aa21.03■□□□□ 0.96
HOXC9-201ENST00000303450 ZNF829Q3KNS6 432 aaPredicted RBP21.03■□□□□ 0.96
HOXC9-201ENST00000303450 FAM57BQ71RH2 274 aa21.03■□□□□ 0.96
HOXC9-201ENST00000303450 FAM220AQ7Z4H9 259 aa21.03■□□□□ 0.96
HOXC9-201ENST00000303450 ZNF540Q8NDQ6 660 aa21.03■□□□□ 0.96
HOXC9-201ENST00000303450 KLF14Q8TD94 323 aaPredicted RBP21.03■□□□□ 0.96
HOXC9-201ENST00000303450 TMEM80Q96HE8 168 aa21.03■□□□□ 0.96
HOXC9-201ENST00000303450 SYT3Q9BQG1 590 aa21.03■□□□□ 0.96
HOXC9-201ENST00000303450 POFUT1Q9H488 388 aa21.03■□□□□ 0.96
HOXC9-201ENST00000303450 CBLN4Q9NTU7 201 aa21.03■□□□□ 0.96
HOXC9-201ENST00000303450 ERVK13-1Q9NX77 482 aa21.03■□□□□ 0.96
HOXC9-201ENST00000303450 SCN3BQ9NY72 215 aa21.03■□□□□ 0.96
HOXC9-201ENST00000303450 PTTG3PQ9NZH4 202 aa21.03■□□□□ 0.96
HOXC9-201ENST00000303450 GNG8Q9UK08 70 aa21.03■□□□□ 0.96
HOXC9-201ENST00000303450 TMEM269A0A1B0GVZ9 245 aa21.02■□□□□ 0.96
HOXC9-201ENST00000303450 SLC1A7O00341 560 aa21.02■□□□□ 0.96
HOXC9-201ENST00000303450 TBX1O43435 398 aa21.02■□□□□ 0.96
HOXC9-201ENST00000303450 PIPP12273 146 aaPredicted RBP21.02■□□□□ 0.96
HOXC9-201ENST00000303450 KLF3P57682 345 aaPredicted RBP21.02■□□□□ 0.96
HOXC9-201ENST00000303450 ACTA2P62736 377 aa21.02■□□□□ 0.96
HOXC9-201ENST00000303450 ACTG2P63267 376 aa21.02■□□□□ 0.96
HOXC9-201ENST00000303450 ST3GAL4Q11206 333 aa21.02■□□□□ 0.96
HOXC9-201ENST00000303450 GALEQ14376 348 aa21.02■□□□□ 0.96
HOXC9-201ENST00000303450 EFNB3Q15768 340 aa21.02■□□□□ 0.96
HOXC9-201ENST00000303450 SNAI3Q3KNW1 292 aa21.02■□□□□ 0.96
HOXC9-201ENST00000303450 ZNF684Q5T5D7 378 aa21.02■□□□□ 0.96
HOXC9-201ENST00000303450 AHSA2Q719I0 299 aa21.02■□□□□ 0.96
HOXC9-201ENST00000303450 DTX2Q86UW9 622 aa21.02■□□□□ 0.96
HOXC9-201ENST00000303450 LRP11Q86VZ4 500 aa21.02■□□□□ 0.96
HOXC9-201ENST00000303450 OR52H1Q8NGJ2 320 aa21.02■□□□□ 0.96
HOXC9-201ENST00000303450 PGAM5Q96HS1 289 aa21.02■□□□□ 0.96
HOXC9-201ENST00000303450 ALG8Q9BVK2 526 aa21.02■□□□□ 0.96
HOXC9-201ENST00000303450 H3BSA7 217 aa21.01■□□□□ 0.95
HOXC9-201ENST00000303450 ATE1O95260 518 aa21.01■□□□□ 0.95
HOXC9-201ENST00000303450 RAF1P04049 648 aa21.01■□□□□ 0.95
HOXC9-201ENST00000303450 TACSTD2P09758 323 aa21.01■□□□□ 0.95
HOXC9-201ENST00000303450 CDONQ4KMG0 1287 aa21.01■□□□□ 0.95
HOXC9-201ENST00000303450 TP53I3Q53FA7 332 aa21.01■□□□□ 0.95
HOXC9-201ENST00000303450 MBNL2Q5VZF2 373 aaKnown RBP21.01■□□□□ 0.95
HOXC9-201ENST00000303450 KCTD20Q7Z5Y7 419 aa21.01■□□□□ 0.95
HOXC9-201ENST00000303450 STX19Q8N4C7 294 aa21.01■□□□□ 0.95
HOXC9-201ENST00000303450 TRAF4Q9BUZ4 470 aaPredicted RBP21.01■□□□□ 0.95
HOXC9-201ENST00000303450 JAM3Q9BX67 310 aa21.01■□□□□ 0.95
HOXC9-201ENST00000303450 ST6GALNAC2Q9UJ37 374 aa21.01■□□□□ 0.95
HOXC9-201ENST00000303450 DIMT1Q9UNQ2 313 aaKnown RBP21.01■□□□□ 0.95
HOXC9-201ENST00000303450 PLEKHA6Q9Y2H5 1048 aa21.01■□□□□ 0.95
HOXC9-201ENST00000303450 POLQO75417 2590 aa21.01■□□□□ 0.95
HOXC9-201ENST00000303450 RPP14O95059 124 aaKnown RBP21■□□□□ 0.95
HOXC9-201ENST00000303450 CLPTM1O96005 669 aa21■□□□□ 0.95
HOXC9-201ENST00000303450 CD8AP01732 235 aa21■□□□□ 0.95
HOXC9-201ENST00000303450 BMP4P12644 408 aa21■□□□□ 0.95
HOXC9-201ENST00000303450 MYL12AP19105 171 aa21■□□□□ 0.95
HOXC9-201ENST00000303450 MPV17P39210 176 aa21■□□□□ 0.95
HOXC9-201ENST00000303450 EVX1P49640 407 aa21■□□□□ 0.95
HOXC9-201ENST00000303450 SNRPD2P62316 118 aaKnown RBP21■□□□□ 0.95
HOXC9-201ENST00000303450 MED21Q13503 144 aa21■□□□□ 0.95
HOXC9-201ENST00000303450 MST1LQ2TV78 715 aa21■□□□□ 0.95
HOXC9-201ENST00000303450 LIPNQ5VXI9 398 aa21■□□□□ 0.95
HOXC9-201ENST00000303450 PRSS45Q7RTY3 260 aa21■□□□□ 0.95
HOXC9-201ENST00000303450 OR10A2Q9H208 303 aa21■□□□□ 0.95
HOXC9-201ENST00000303450 CHCHD3Q9NX63 227 aaKnown RBP21■□□□□ 0.95
HOXC9-201ENST00000303450 TPRKBQ9Y3C4 175 aa21■□□□□ 0.95
HOXC9-201ENST00000303450 PCDHGB5Q9Y5G0 923 aa21■□□□□ 0.95
HOXC9-201ENST00000303450 A0A1W2PPW3 197 aa20.99■□□□□ 0.95
HOXC9-201ENST00000303450 TMEM129A0AVI4 362 aa20.99■□□□□ 0.95
HOXC9-201ENST00000303450 PTGES3LE9PB15 166 aa20.99■□□□□ 0.95
HOXC9-201ENST00000303450 CCDC159P0C7I6 412 aa20.99■□□□□ 0.95
HOXC9-201ENST00000303450 MMP16P51512 607 aa20.99■□□□□ 0.95
HOXC9-201ENST00000303450 OR12D2P58182 307 aa20.99■□□□□ 0.95
HOXC9-201ENST00000303450 HLXQ14774 488 aaPredicted RBP20.99■□□□□ 0.95
HOXC9-201ENST00000303450 SWI5Q1ZZU3 235 aa20.99■□□□□ 0.95
HOXC9-201ENST00000303450 ZNF786Q8N393 782 aa20.99■□□□□ 0.95
HOXC9-201ENST00000303450 PIGTQ969N2 578 aa20.99■□□□□ 0.95
HOXC9-201ENST00000303450 CMBLQ96DG6 245 aa20.99■□□□□ 0.95
HOXC9-201ENST00000303450 FAM206AQ9NX38 181 aa20.99■□□□□ 0.95
HOXC9-201ENST00000303450 GTF2A1LQ9UNN4 478 aa20.99■□□□□ 0.95
HOXC9-201ENST00000303450 EXOSC1Q9Y3B2 195 aaKnown RBP20.99■□□□□ 0.95
HOXC9-201ENST00000303450 R4GMQ9 66 aa20.99■□□□□ 0.95
HOXC9-201ENST00000303450 IGLV3-9A0A075B6K5 115 aa20.99■□□□□ 0.95
HOXC9-201ENST00000303450 C5orf63A6NC05 138 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms