RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 C7orf72A4D263 438 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 GLAP06280 429 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 SSPNQ14714 243 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 PDZD11Q5EBL8 140 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 WDR5BQ86VZ2 330 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 LYG1Q8N1E2 194 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 TMEM208Q9BTX3 173 aa7.04□□□□□ -1.28
SCN9A-201ENST00000303354 RANGRFQ9HD47 186 aaPredicted RBP7.04□□□□□ -1.28
SCN9A-201ENST00000303354 GDF2Q9UK05 429 aaPredicted RBP7.04□□□□□ -1.28
SCN9A-201ENST00000303354 IGHV3OR16-12A0A075B7B8 117 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 NME2P1O60361 137 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 UPK1BO75841 260 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 ADIRFQ15847 76 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 NXNL2Q5VZ03 156 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 FCRL6Q6DN72 434 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 ACSM6Q6P461 480 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 NUDCD2Q8WVJ2 157 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 EPOPA6NHQ4 379 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 DNAJB6O75190 326 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 PAPLNO95428 1278 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 PRPH2P23942 346 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 TOMM34Q15785 309 aaPredicted RBP7.03□□□□□ -1.28
SCN9A-201ENST00000303354 DBX2Q6ZNG2 339 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 GPR32P1Q8NGA4 272 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 LAT2Q9GZY6 243 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 TOGARAM1Q9Y4F4 1720 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 RPS10-NUDT3A0A1W2PQS6 291 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 AKR7A2O43488 359 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 SNRPCP09234 159 aaKnown RBP7.03□□□□□ -1.28
SCN9A-201ENST00000303354 CNR1P21554 472 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 PPICP45877 212 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 RPS10P46783 165 aaKnown RBP7.03□□□□□ -1.28
SCN9A-201ENST00000303354 RSPO4Q2I0M5 234 aaPredicted RBP7.03□□□□□ -1.28
SCN9A-201ENST00000303354 Q499Y3 187 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 ELFN2Q5R3F8 820 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 ZNF75AQ96N20 296 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 ATF6BQ99941 703 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 ZPBPQ9BS86 351 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 C19orf53Q9UNZ5 99 aaPredicted RBP7.03□□□□□ -1.28
SCN9A-201ENST00000303354 FLVCR2Q9UPI3 526 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 A0A1B0GTL3 188 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 GPR137BO60478 399 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 SCGB1D1O95968 90 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 TPT1P13693 172 aaKnown RBP7.03□□□□□ -1.28
SCN9A-201ENST00000303354 LCN15Q6UWW0 184 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 LINC01465Q8N7H1 131 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 APOBEC4Q8WW27 367 aaKnown RBP7.03□□□□□ -1.28
SCN9A-201ENST00000303354 STACQ99469 402 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 PPIL1Q9Y3C6 166 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 TIMM9Q9Y5J7 89 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 AUP1Q9Y679 476 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 N4BP2Q86UW6 1770 aaPredicted RBP7.03□□□□□ -1.28
SCN9A-201ENST00000303354 M0QZ24 198 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 BMP2P12643 396 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 EPHA8P29322 1005 aaPredicted RBP7.03□□□□□ -1.28
SCN9A-201ENST00000303354 HTR1FP30939 366 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 GUCA2AQ02747 115 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 RTL8BQ17RB0 113 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 IAH1Q2TAA2 248 aaPredicted RBP7.03□□□□□ -1.28
SCN9A-201ENST00000303354 CYHR1Q6ZMK1 362 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 KIAA1958Q8N8K9 716 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 OR1M1Q8NGA1 313 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 OR4C3Q8NH37 302 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 KCNG3Q8TAE7 436 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 BLNKQ8WV28 456 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 PLEKHF2Q9H8W4 249 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 CRXO43186 299 aaPredicted RBP7.03□□□□□ -1.28
SCN9A-201ENST00000303354 XRCC2O43543 280 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 CTSVO60911 334 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 SLC25A6P12236 298 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 BSGP35613 385 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 GABARAPL2P60520 117 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 SIGLEC14Q08ET2 396 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 GGTA1PQ4G0N0 100 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 ZNF774Q6NX45 483 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 SIAH3Q8IW03 269 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 MSL2Q9HCI7 577 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 OR7C2O60412 319 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 TGM6O95932 706 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 CPT2P23786 658 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 KCNJ8Q15842 424 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 LHFPL2Q6ZUX7 228 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 DOK3Q7L591 496 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 SPRED1Q7Z699 444 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 RPEQ96AT9 228 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 MED17Q9NVC6 651 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 ADAM20O43506 726 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 SPINK4O60575 86 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 SPI1P17947 270 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 SDHAP31040 664 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 DPTQ07507 201 aa7.03□□□□□ -1.28
SCN9A-201ENST00000303354 MLLT11Q13015 90 aaPredicted RBP7.03□□□□□ -1.28
SCN9A-201ENST00000303354 NDRG4Q9ULP0 352 aaKnown RBP7.03□□□□□ -1.28
SCN9A-201ENST00000303354 MYH7P12883 1935 aa7.02□□□□□ -1.28
SCN9A-201ENST00000303354 PTHLHP12272 177 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 UBE2KP61086 200 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 RAP2BP61225 183 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 DUSP8Q13202 625 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 NSUN5P2Q63ZY6 315 aa7.02□□□□□ -1.29
SCN9A-201ENST00000303354 LACC1Q8IV20 430 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms