RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 LYZL4Q96KX0 146 aa8.18□□□□□ -1.1
RFX3-201ENST00000302303 C4orf45Q96LM5 186 aa8.18□□□□□ -1.1
RFX3-201ENST00000302303 DOK1Q99704 481 aa8.18□□□□□ -1.1
RFX3-201ENST00000302303 CCDC90BQ9GZT6 254 aa8.18□□□□□ -1.1
RFX3-201ENST00000302303 NIPAL2Q9H841 368 aa8.18□□□□□ -1.1
RFX3-201ENST00000302303 MOV10Q9HCE1 1003 aaKnown RBP8.18□□□□□ -1.1
RFX3-201ENST00000302303 TBCCD1Q9NVR7 557 aa8.18□□□□□ -1.1
RFX3-201ENST00000302303 GNG8Q9UK08 70 aa8.18□□□□□ -1.1
RFX3-201ENST00000302303 SLC22A13Q9Y226 551 aa8.18□□□□□ -1.1
RFX3-201ENST00000302303 R4GMQ9 66 aa8.18□□□□□ -1.1
RFX3-201ENST00000302303 CELSR2Q9HCU4 2923 aa8.17□□□□□ -1.1
RFX3-201ENST00000302303 LRBAP50851 2863 aa8.17□□□□□ -1.1
RFX3-201ENST00000302303 ICE1Q9Y2F5 2266 aa8.17□□□□□ -1.1
RFX3-201ENST00000302303 FASNP49327 2511 aaKnown RBP8.17□□□□□ -1.1
RFX3-201ENST00000302303 A0A1B0GTI1 187 aa8.17□□□□□ -1.1
RFX3-201ENST00000302303 TMEM269A0A1B0GVZ9 245 aa8.17□□□□□ -1.1
RFX3-201ENST00000302303 OR4C45A6NMZ5 311 aa8.17□□□□□ -1.1
RFX3-201ENST00000302303 ATP6V1G2-DDX39BF2Z307 99 aa8.17□□□□□ -1.1
RFX3-201ENST00000302303 ABCD4O14678 606 aa8.17□□□□□ -1.1
RFX3-201ENST00000302303 SMPD2O60906 423 aa8.17□□□□□ -1.1
RFX3-201ENST00000302303 INMTO95050 263 aa8.17□□□□□ -1.1
RFX3-201ENST00000302303 TFAP2AP05549 437 aa8.17□□□□□ -1.1
RFX3-201ENST00000302303 RPSAP08865 295 aaKnown RBP8.17□□□□□ -1.1
RFX3-201ENST00000302303 MYL12AP19105 171 aa8.17□□□□□ -1.1
RFX3-201ENST00000302303 CCNOP22674 350 aa8.17□□□□□ -1.1
RFX3-201ENST00000302303 NR4A1P22736 598 aa8.17□□□□□ -1.1
RFX3-201ENST00000302303 APLNRP35414 380 aa8.17□□□□□ -1.1
RFX3-201ENST00000302303 PEX19P40855 299 aa8.17□□□□□ -1.1
RFX3-201ENST00000302303 TGM4P49221 684 aa8.17□□□□□ -1.1
RFX3-201ENST00000302303 UCP2P55851 309 aa8.17□□□□□ -1.1
RFX3-201ENST00000302303 TBC1D28Q2M2D7 210 aa8.17□□□□□ -1.1
RFX3-201ENST00000302303 DMKNQ6E0U4 476 aaPredicted RBP8.17□□□□□ -1.1
RFX3-201ENST00000302303 TMEM108Q6UXF1 575 aa8.17□□□□□ -1.1
RFX3-201ENST00000302303 Q6ZSR3 168 aa8.17□□□□□ -1.1
RFX3-201ENST00000302303 YIPF7Q8N8F6 280 aa8.17□□□□□ -1.1
RFX3-201ENST00000302303 OR8B12Q8NGG6 310 aa8.17□□□□□ -1.1
RFX3-201ENST00000302303 SGK3Q96BR1 496 aa8.17□□□□□ -1.1
RFX3-201ENST00000302303 PGLYRP3Q96LB9 341 aa8.17□□□□□ -1.1
RFX3-201ENST00000302303 OPALINQ96PE5 141 aa8.17□□□□□ -1.1
RFX3-201ENST00000302303 DCLRE1CQ96SD1 692 aaKnown RBP8.17□□□□□ -1.1
RFX3-201ENST00000302303 ERGIC3Q9Y282 383 aa8.17□□□□□ -1.1
RFX3-201ENST00000302303 ACOD1A6NK06 481 aa8.16□□□□□ -1.1
RFX3-201ENST00000302303 E7EQL1 145 aa8.16□□□□□ -1.1
RFX3-201ENST00000302303 PLPP2O43688 288 aa8.16□□□□□ -1.1
RFX3-201ENST00000302303 GPRIN2O60269 458 aa8.16□□□□□ -1.1
RFX3-201ENST00000302303 ZFPL1O95159 310 aa8.16□□□□□ -1.1
RFX3-201ENST00000302303 MT-ND5P03915 603 aa8.16□□□□□ -1.1
RFX3-201ENST00000302303 FAM157BP0CG42 384 aa8.16□□□□□ -1.1
RFX3-201ENST00000302303 JUNBP17275 347 aaPredicted RBP8.16□□□□□ -1.1
RFX3-201ENST00000302303 CCR9P51686 369 aa8.16□□□□□ -1.1
RFX3-201ENST00000302303 GP2P55259 537 aaKnown RBP8.16□□□□□ -1.1
RFX3-201ENST00000302303 TPTEP56180 551 aa8.16□□□□□ -1.1
RFX3-201ENST00000302303 RPS11P62280 158 aaKnown RBP eCLIP8.16□□□□□ -1.1
RFX3-201ENST00000302303 ALKBH1Q13686 389 aaKnown RBP8.16□□□□□ -1.1
RFX3-201ENST00000302303 SSX1Q16384 188 aa8.16□□□□□ -1.1
RFX3-201ENST00000302303 BEX5Q5H9J7 111 aa8.16□□□□□ -1.1
RFX3-201ENST00000302303 GLYATL3Q5SZD4 288 aa8.16□□□□□ -1.1
RFX3-201ENST00000302303 SYT6Q5T7P8 510 aaPredicted RBP8.16□□□□□ -1.1
RFX3-201ENST00000302303 TMPRSS11AQ6ZMR5 421 aa8.16□□□□□ -1.1
RFX3-201ENST00000302303 KCTD8Q6ZWB6 473 aa8.16□□□□□ -1.1
RFX3-201ENST00000302303 FAM57BQ71RH2 274 aa8.16□□□□□ -1.1
RFX3-201ENST00000302303 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.16□□□□□ -1.1
RFX3-201ENST00000302303 ELMOD2Q8IZ81 293 aa8.16□□□□□ -1.1
RFX3-201ENST00000302303 RDH10Q8IZV5 341 aa8.16□□□□□ -1.1
RFX3-201ENST00000302303 ZNF283Q8N7M2 679 aa8.16□□□□□ -1.1
RFX3-201ENST00000302303 ZFP41Q8N8Y5 198 aa8.16□□□□□ -1.1
RFX3-201ENST00000302303 KBTBD8Q8NFY9 601 aa8.16□□□□□ -1.1
RFX3-201ENST00000302303 OR10AC1Q8NH08 325 aa8.16□□□□□ -1.1
RFX3-201ENST00000302303 TMEM171Q8WVE6 324 aa8.16□□□□□ -1.1
RFX3-201ENST00000302303 RGP1Q92546 391 aaPredicted RBP8.16□□□□□ -1.1
RFX3-201ENST00000302303 SPTSSAQ969W0 71 aa8.16□□□□□ -1.1
RFX3-201ENST00000302303 SPSB4Q96A44 273 aa8.16□□□□□ -1.1
RFX3-201ENST00000302303 MARS2Q96GW9 593 aaKnown RBP8.16□□□□□ -1.1
RFX3-201ENST00000302303 COG8Q96MW5 612 aa8.16□□□□□ -1.1
RFX3-201ENST00000302303 MND1Q9BWT6 205 aa8.16□□□□□ -1.1
RFX3-201ENST00000302303 PBOV1Q9GZY1 135 aa8.16□□□□□ -1.1
RFX3-201ENST00000302303 BRD7Q9NPI1 651 aa8.16□□□□□ -1.1
RFX3-201ENST00000302303 NUFIP1Q9UHK0 495 aaKnown RBP8.16□□□□□ -1.1
RFX3-201ENST00000302303 OR52A1Q9UKL2 312 aa8.16□□□□□ -1.1
RFX3-201ENST00000302303 SF3B6Q9Y3B4 125 aaKnown RBP8.16□□□□□ -1.1
RFX3-201ENST00000302303 A0A087WXM4 84 aa8.15□□□□□ -1.1
RFX3-201ENST00000302303 MAGEA13PA6NCF6 341 aa8.15□□□□□ -1.1
RFX3-201ENST00000302303 A6NNC1 897 aa8.15□□□□□ -1.1
RFX3-201ENST00000302303 CRYAAP02489 173 aa8.15□□□□□ -1.1
RFX3-201ENST00000302303 LCATP04180 440 aa8.15□□□□□ -1.1
RFX3-201ENST00000302303 TACSTD2P09758 323 aa8.15□□□□□ -1.1
RFX3-201ENST00000302303 HSD11B1P28845 292 aa8.15□□□□□ -1.1
RFX3-201ENST00000302303 PRSS12P56730 875 aa8.15□□□□□ -1.1
RFX3-201ENST00000302303 BDH1Q02338 343 aa8.15□□□□□ -1.1
RFX3-201ENST00000302303 ZNF92Q03936 586 aa8.15□□□□□ -1.1
RFX3-201ENST00000302303 TPBGQ13641 420 aa8.15□□□□□ -1.1
RFX3-201ENST00000302303 HLXQ14774 488 aaPredicted RBP8.15□□□□□ -1.1
RFX3-201ENST00000302303 CDK5R1Q15078 307 aa8.15□□□□□ -1.1
RFX3-201ENST00000302303 MED22Q15528 200 aa8.15□□□□□ -1.1
RFX3-201ENST00000302303 TAF13Q15543 124 aa8.15□□□□□ -1.1
RFX3-201ENST00000302303 ALKBH6Q3KRA9 238 aa8.15□□□□□ -1.1
RFX3-201ENST00000302303 CCDC58Q4VC31 144 aa8.15□□□□□ -1.1
RFX3-201ENST00000302303 HIST2H2BCQ6DN03 193 aa8.15□□□□□ -1.1
RFX3-201ENST00000302303 ADAM5Q6NVV9 412 aa8.15□□□□□ -1.1
RFX3-201ENST00000302303 LRP11Q86VZ4 500 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms