RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 SYT5O00445 386 aa5.08□□□□□ -1.6
CPSF2-201ENST00000298875 CSNK1DP48730 415 aa5.08□□□□□ -1.6
CPSF2-201ENST00000298875 NHLH2Q02577 135 aa5.08□□□□□ -1.6
CPSF2-201ENST00000298875 EXT1Q16394 746 aa5.08□□□□□ -1.6
CPSF2-201ENST00000298875 PDLIM5Q96HC4 596 aaKnown RBP5.08□□□□□ -1.6
CPSF2-201ENST00000298875 NPAS1Q99742 590 aa5.08□□□□□ -1.6
CPSF2-201ENST00000298875 ZNF727A8MUV8 499 aa5.08□□□□□ -1.6
CPSF2-201ENST00000298875 TAPBPO15533 448 aa5.08□□□□□ -1.6
CPSF2-201ENST00000298875 TNFRSF4P43489 277 aa5.08□□□□□ -1.6
CPSF2-201ENST00000298875 MAVSQ7Z434 540 aa5.08□□□□□ -1.6
CPSF2-201ENST00000298875 OR13C8Q8NGS7 320 aa5.08□□□□□ -1.6
CPSF2-201ENST00000298875 OR8B4Q96RC9 309 aa5.08□□□□□ -1.6
CPSF2-201ENST00000298875 RIMS4Q9H426 269 aaPredicted RBP5.08□□□□□ -1.6
CPSF2-201ENST00000298875 PRSS16Q9NQE7 514 aa5.08□□□□□ -1.6
CPSF2-201ENST00000298875 ARRDC5A6NEK1 342 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 GPR31O00270 319 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 GFRA2O00451 464 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 CTNSO60931 367 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 IGHV3-9P01782 118 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 PCSK6P29122 969 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 LIM2P55344 173 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 TCL1AP56279 114 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 MANEAQ5SRI9 462 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 ADAM5Q6NVV9 412 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 RSPO2Q6UXX9 243 aaPredicted RBP5.07□□□□□ -1.6
CPSF2-201ENST00000298875 ZBTB44Q8NCP5 570 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 FAM71CQ8NEG0 241 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 TRIB1Q96RU8 372 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 COA3Q9Y2R0 106 aaPredicted RBP5.07□□□□□ -1.6
CPSF2-201ENST00000298875 SHROOM3Q8TF72 1996 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 FAM186AA6NE01 2351 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 H0YIV9 168 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 GLCEO94923 617 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 SFTA3P0C7M3 94 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 CTSAP10619 480 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 ADAMTSL4Q6UY14 1074 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 TMPRSS11FQ6ZWK6 438 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 DND1Q8IYX4 353 aaKnown RBP5.07□□□□□ -1.6
CPSF2-201ENST00000298875 KIAA1958Q8N8K9 716 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 TSLPQ969D9 159 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 LIN7CQ9NUP9 197 aaKnown RBP5.07□□□□□ -1.6
CPSF2-201ENST00000298875 RASL12Q9NYN1 266 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 EXOGQ9Y2C4 368 aaKnown RBP5.07□□□□□ -1.6
CPSF2-201ENST00000298875 PRAMEF25A6NGN4 478 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 RFPL4AA6NLU0 287 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 RFPL4AL1F8VTS6 287 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 OR7C2O60412 319 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 YIF1AO95070 293 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 SMIM17P0DL12 118 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 NKX2-1P43699 371 aaPredicted RBP5.07□□□□□ -1.6
CPSF2-201ENST00000298875 DGCR2P98153 550 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 TAZQ16635 292 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 LCN15Q6UWW0 184 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 MRPL52Q86TS9 123 aaKnown RBP5.07□□□□□ -1.6
CPSF2-201ENST00000298875 NANOGP1Q8N7R0 232 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 TMEM102Q8N9M5 508 aaPredicted RBP5.07□□□□□ -1.6
CPSF2-201ENST00000298875 ATOH8Q96SQ7 321 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 C20orf27Q9GZN8 174 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 LANCL2Q9NS86 450 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 ZNF275Q9NSD4 429 aaPredicted RBP5.07□□□□□ -1.6
CPSF2-201ENST00000298875 SLC23A1Q9UHI7 598 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 C5orf49A4QMS7 147 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 AKR7A3O95154 331 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 CA3P07451 260 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 FABP2P12104 132 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 RRADP55042 308 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 TMEM268Q5VZI3 342 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 ZCCHC14Q8WYQ9 949 aaKnown RBP5.07□□□□□ -1.6
CPSF2-201ENST00000298875 GMLQ99445 158 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 GLIPR2Q9H4G4 154 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 RCL1Q9Y2P8 373 aaKnown RBP5.07□□□□□ -1.6
CPSF2-201ENST00000298875 OR5K3A6NET4 321 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 DBX1A6NMT0 343 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 ZNF865P0CJ78 1059 aaPredicted RBP5.07□□□□□ -1.6
CPSF2-201ENST00000298875 SLC25A6P12236 298 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 MDH2P40926 338 aaKnown RBP5.07□□□□□ -1.6
CPSF2-201ENST00000298875 AGFG1P52594 562 aaKnown RBP5.07□□□□□ -1.6
CPSF2-201ENST00000298875 PPP1CBP62140 327 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 FAM74A3Q4VXF1 159 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 CADM3Q8N126 398 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 SLC38A9Q8NBW4 561 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 CPEB3Q8NE35 698 aaKnown RBP5.07□□□□□ -1.6
CPSF2-201ENST00000298875 GPR61Q9BZJ8 451 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 FBXO34Q9NWN3 711 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 ZNF107Q9UII5 783 aaPredicted RBP5.07□□□□□ -1.6
CPSF2-201ENST00000298875 IGHV3-64DA0A0J9YX35 117 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 FITM1A5D6W6 292 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 ZNF528Q3MIS6 628 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 PRAMEF5Q5TYX0 476 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 PRAMEF6Q5VXH4 476 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 ZNF511Q8NB15 262 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 GPR32P1Q8NGA4 272 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 ATOH1Q92858 354 aaPredicted RBP5.07□□□□□ -1.6
CPSF2-201ENST00000298875 APH1AQ96BI3 265 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 TM4SF18Q96CE8 201 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 MOGAT1Q96PD6 335 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 GSX1Q9H4S2 264 aaPredicted RBP5.07□□□□□ -1.6
CPSF2-201ENST00000298875 CXorf65A6NEN9 183 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 ORM1P02763 201 aa5.07□□□□□ -1.6
CPSF2-201ENST00000298875 SEMG1P04279 462 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms