RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 NIPAL2Q9H841 368 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 B3GNT2Q9NY97 397 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 LRFN1Q9P244 771 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 DOCK10Q96BY6 2186 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 OR5H15A6NDH6 313 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 GABARAPH6UMI1 98 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 SOX15O60248 233 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 ZNF780AO75290 641 aaPredicted RBP4.3□□□□□ -1.72
UBR1-201ENST00000290650 PDGFBP01127 241 aaPredicted RBP4.3□□□□□ -1.72
UBR1-201ENST00000290650 MNX1P50219 401 aaPredicted RBP4.3□□□□□ -1.72
UBR1-201ENST00000290650 FGL1Q08830 312 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 ZNF79Q15937 498 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 DHRS13Q6UX07 377 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 OR10R2Q8NGX6 335 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 OR1S1Q8NH92 325 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 ST8SIA4Q92187 359 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 C10orf90Q96M02 699 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 AIFM2Q9BRQ8 373 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 RANBP2P49792 3224 aaKnown RBP4.3□□□□□ -1.72
UBR1-201ENST00000290650 FRG2CA6NGY1 282 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 ZNF14P17017 642 aaPredicted RBP4.3□□□□□ -1.72
UBR1-201ENST00000290650 ETV6P41212 452 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 CCR9P51686 369 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 MFGE8Q08431 387 aaPredicted RBP4.3□□□□□ -1.72
UBR1-201ENST00000290650 DOC2BQ14184 412 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 SFRP5Q5T4F7 317 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 OR51H1Q8NH63 302 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 FCRL1Q96LA6 429 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 PTTG3PQ9NZH4 202 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 FRRS1LQ9P0K9 344 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 ANKRD30BLA7E2S9 258 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 B8ZZF3 427 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 DCTN6O00399 190 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 DPM1O60762 260 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 SNRNP70P08621 437 aaKnown RBP4.3□□□□□ -1.72
UBR1-201ENST00000290650 ADRA2AP08913 450 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 AKR1C3P42330 323 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 CLDN20P56880 219 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 FOXK1P85037 733 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 MRPL49Q13405 166 aaKnown RBP4.3□□□□□ -1.72
UBR1-201ENST00000290650 SLC35D3Q5M8T2 416 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 AADACL4Q5VUY2 407 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 TMUB2Q71RG4 321 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 ZNF454Q8N9F8 522 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 SMRP1Q8NCR6 262 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 OR52N4Q8NGI2 321 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 THRSPQ92748 146 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 WDR89Q96FK6 387 aaPredicted RBP4.3□□□□□ -1.72
UBR1-201ENST00000290650 AICDAQ9GZX7 198 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 TXNIPQ9H3M7 391 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 NPAP1Q9NZP6 1156 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 TMEM184BQ9Y519 407 aaPredicted RBP4.3□□□□□ -1.72
UBR1-201ENST00000290650 LRRK1Q38SD2 2015 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 TICRRQ7Z2Z1 1910 aa4.3□□□□□ -1.72
UBR1-201ENST00000290650 TRAV8-7A0A075B6U6 113 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 TRAPPC2LH3BP13 241 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 SGCEO43556 437 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 UBCP0CG48 685 aaKnown RBP4.29□□□□□ -1.72
UBR1-201ENST00000290650 PET100P0DJ07 73 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 OR3A4PP47883 348 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 RIPPLY1Q0D2K3 151 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 MESTQ5EB52 335 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 NLRC3Q7RTR2 1065 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 LRRTM1Q86UE6 522 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 GCNT2Q8N0V5 402 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 LILRB2Q8N423 598 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 RDH5Q92781 318 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 VSTM2LQ96N03 204 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 PPA2Q9H2U2 334 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 CRLF2Q9HC73 371 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 OR5V1Q9UGF6 321 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 KCNE5Q9UJ90 142 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 NEUROG3Q9Y4Z2 214 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 CSAG2Q9Y5P2 127 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 A0A087WV48 116 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 H7C2Y5 167 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 FOXS1O43638 330 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 LMX1BO60663 402 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 TNFSF15O95150 251 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 EFNA3P52797 238 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 FZD5Q13467 585 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 FAM209AQ5JX71 171 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 C1orf53Q5VUE5 145 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 GABRG1Q8N1C3 465 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 ZNF808Q8N4W9 903 aaPredicted RBP4.29□□□□□ -1.72
UBR1-201ENST00000290650 OR1M1Q8NGA1 313 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 CPT1CQ8TCG5 803 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 ST8SIA2Q92186 375 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 RRNAD1Q96FB5 475 aaKnown RBP4.29□□□□□ -1.72
UBR1-201ENST00000290650 TMEM272A0A1B0GTI8 110 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 NAP1L6A6NFF2 107 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 ERVH48-1M5A8F1 160 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 AGTR1P30556 359 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 APOBEC1P41238 236 aaKnown RBP4.29□□□□□ -1.72
UBR1-201ENST00000290650 ZNF136P52737 540 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 ZNF684Q5T5D7 378 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 TMEM71Q6P5X7 295 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 TMEM88Q6PEY1 159 aa4.29□□□□□ -1.72
UBR1-201ENST00000290650 FIP1L1Q6UN15 594 aaKnown RBP4.29□□□□□ -1.72
UBR1-201ENST00000290650 TMPRSS11FQ6ZWK6 438 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms