RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 EIF1AYO14602 144 aaKnown RBP9.28□□□□□ -0.92
SKA1-201ENST00000285116 XKRYO14609 159 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 OR2T1O43869 369 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 FARS2O95363 451 aaKnown RBP9.28□□□□□ -0.92
SKA1-201ENST00000285116 CYB5AP00167 134 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 PGAM2P15259 253 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 HPGDP15428 266 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 CBR1P16152 277 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 MAOAP21397 527 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 DRD1P21728 446 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 EIF1AXP47813 144 aaKnown RBP9.28□□□□□ -0.92
SKA1-201ENST00000285116 GSK3AP49840 483 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 MEP1BQ16820 701 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 DEGS2Q6QHC5 323 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 SLC25A42Q86VD7 318 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 ZNF561Q8N587 486 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 OR13C8Q8NGS7 320 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 MITD1Q8WV92 249 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 AQP3Q92482 292 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 ZNF524Q96C55 264 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 PHB2Q99623 299 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 LANCL2Q9NS86 450 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 MRPL22Q9NWU5 206 aaKnown RBP9.28□□□□□ -0.92
SKA1-201ENST00000285116 METTL1Q9UBP6 276 aaKnown RBP9.28□□□□□ -0.92
SKA1-201ENST00000285116 SCGNO76038 276 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 FAM157CP0CG43 387 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 TBPP20226 339 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 CCKBRP32239 447 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 OR7A5Q15622 319 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 TOMM34Q15785 309 aaPredicted RBP9.28□□□□□ -0.92
SKA1-201ENST00000285116 CDNFQ49AH0 187 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 PAQR4Q8N4S7 273 aaPredicted RBP9.28□□□□□ -0.92
SKA1-201ENST00000285116 TMED6Q8WW62 240 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 SEC61A2Q9H9S3 476 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 RHOFQ9HBH0 211 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 R4GMQ9 66 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 LILRA5A6NI73 299 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 C17orf105B2RV13 164 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 ALG1L2C9J202 215 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 PNPP00491 289 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 DCNP07585 359 aaKnown RBP9.28□□□□□ -0.92
SKA1-201ENST00000285116 ZNF44P15621 663 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 PSMB6P28072 239 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 FASLGP48023 281 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 CAV2P51636 162 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 RIDAP52758 137 aaKnown RBP9.28□□□□□ -0.92
SKA1-201ENST00000285116 ZNF117Q03924 483 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 NNATQ16517 81 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 MST1LQ2TV78 715 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 DEFB110Q30KQ9 67 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 SCGB2B2Q4G0G5 96 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 ZNF542PQ5EBM4 170 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 OR10R2Q8NGX6 335 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 SAT2Q96F10 170 aaPredicted RBP9.28□□□□□ -0.92
SKA1-201ENST00000285116 PRRT1Q99946 306 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 LPAR3Q9UBY5 353 aa9.28□□□□□ -0.92
SKA1-201ENST00000285116 TRBV6-7A0A0A0MS04 114 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 H7C1C5 153 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 TSPAN2O60636 221 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 ALOX12BO75342 701 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 IGHV4-34P06331 123 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 FOSL2P15408 326 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 MUC1P15941 1255 aaPredicted RBP9.27□□□□□ -0.93
SKA1-201ENST00000285116 CRABP1P29762 137 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 CAPZBP47756 277 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 LCN6P62502 163 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 INSM1Q01101 510 aaPredicted RBP9.27□□□□□ -0.93
SKA1-201ENST00000285116 FZD2Q14332 565 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 ELOCQ15369 112 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 OR52N5Q8NH56 324 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 NUDCD2Q8WVJ2 157 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 DCUN1D4Q92564 292 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 C14orf79Q96F83 325 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 LMF1Q96S06 567 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 TPSD1Q9BZJ3 242 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 ULBP3Q9BZM4 244 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 SELENOIQ9C0D9 397 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 NXF5Q9H1B4 397 aaKnown RBP9.27□□□□□ -0.93
SKA1-201ENST00000285116 TCEAL2Q9H3H9 227 aaPredicted RBP9.27□□□□□ -0.93
SKA1-201ENST00000285116 CHMP1AQ9HD42 196 aaPredicted RBP9.27□□□□□ -0.93
SKA1-201ENST00000285116 CYTL1Q9NRR1 136 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 SEC16AO15027 2179 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 C9orf170A2RU37 121 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 CPED1A4D0V7 1026 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 SEMA4FO95754 770 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 CRHP06850 196 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 FBP1P09467 338 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 SFTA3P0C7M3 94 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 PRF1P14222 555 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 PGCP20142 388 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 AGAP20933 346 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 CXCR1P25024 350 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 PPT1P50897 306 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 IL13RA1P78552 427 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 FABP9Q0Z7S8 132 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 PMPCAQ10713 525 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 ZP4Q12836 540 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 PPP1R1AQ13522 171 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 LRRC69Q6ZNQ3 347 aa9.27□□□□□ -0.93
SKA1-201ENST00000285116 ZNF627Q7L945 461 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms