RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 BSPH1Q075Z2 132 aa18.84■□□□□ 0.61
PDLIM3-203ENST00000284771 SYT6Q5T7P8 510 aaPredicted RBP18.84■□□□□ 0.61
PDLIM3-203ENST00000284771 FAM57BQ71RH2 274 aa18.84■□□□□ 0.61
PDLIM3-203ENST00000284771 ZNF367Q7RTV3 350 aa18.84■□□□□ 0.61
PDLIM3-203ENST00000284771 RPS4Y2Q8TD47 263 aa18.84■□□□□ 0.61
PDLIM3-203ENST00000284771 MUL1Q969V5 352 aa18.84■□□□□ 0.61
PDLIM3-203ENST00000284771 ABCA4P78363 2273 aa18.84■□□□□ 0.61
PDLIM3-203ENST00000284771 ICE1Q9Y2F5 2266 aa18.83■□□□□ 0.61
PDLIM3-203ENST00000284771 LOC110117498-PIK3R3F6TDL0 507 aa18.83■□□□□ 0.61
PDLIM3-203ENST00000284771 ICMTO60725 284 aa18.83■□□□□ 0.61
PDLIM3-203ENST00000284771 ANXA2P07355 339 aaKnown RBP18.83■□□□□ 0.61
PDLIM3-203ENST00000284771 EPXP11678 715 aa18.83■□□□□ 0.61
PDLIM3-203ENST00000284771 JUNBP17275 347 aaPredicted RBP18.83■□□□□ 0.61
PDLIM3-203ENST00000284771 ALKBH1Q13686 389 aaKnown RBP18.83■□□□□ 0.61
PDLIM3-203ENST00000284771 CDK5R1Q15078 307 aa18.83■□□□□ 0.61
PDLIM3-203ENST00000284771 TIGD6Q17RP2 521 aa18.83■□□□□ 0.61
PDLIM3-203ENST00000284771 ZNF829Q3KNS6 432 aaPredicted RBP18.83■□□□□ 0.61
PDLIM3-203ENST00000284771 CCDC58Q4VC31 144 aa18.83■□□□□ 0.61
PDLIM3-203ENST00000284771 DMKNQ6E0U4 476 aaPredicted RBP18.83■□□□□ 0.61
PDLIM3-203ENST00000284771 DCLRE1CQ96SD1 692 aaKnown RBP18.83■□□□□ 0.61
PDLIM3-203ENST00000284771 PBOV1Q9GZY1 135 aa18.83■□□□□ 0.61
PDLIM3-203ENST00000284771 OR52A1Q9UKL2 312 aa18.83■□□□□ 0.61
PDLIM3-203ENST00000284771 PLCE1Q9P212 2302 aa18.83■□□□□ 0.6
PDLIM3-203ENST00000284771 OR4C45A6NMZ5 311 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 TTRP02766 147 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 LCATP04180 440 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 CELP19835 753 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 KIR2DL3P43628 341 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 BDH1Q02338 343 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 MLLT11Q13015 90 aaPredicted RBP18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 ARMCX4Q5H9R4 360 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 RPL22L1Q6P5R6 122 aaKnown RBP18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 TMEM108Q6UXF1 575 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 RDH10Q8IZV5 341 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 OR8B12Q8NGG6 310 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 OR1J2Q8NGS2 313 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 FCGR1BQ92637 280 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 PDCD1LG2Q9BQ51 273 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 OR51B6Q9H340 312 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 CDH20Q9HBT6 801 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 NUFIP1Q9UHK0 495 aaKnown RBP18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 GTF2A1LQ9UNN4 478 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 USP9YO00507 2555 aaPredicted RBP18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 PKDREJQ9NTG1 2253 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 DEFB108AA8MXU0 73 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 ZFPL1O95159 310 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 APOC1P02654 83 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 FAM157BP0CG42 384 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 PTAFRP25105 342 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 PSMB9P28065 219 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 LIPAP38571 399 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 MRPL28Q13084 256 aaKnown RBP18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 ODF4Q2M2E3 257 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 NCMAPQ5T1S8 102 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 RFPL4BQ6ZWI9 263 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 ELMOD2Q8IZ81 293 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 TMIGD2Q96BF3 282 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 PLPPR2Q96GM1 343 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 PGLYRP3Q96LB9 341 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 SOX7Q9BT81 388 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 ISYNA1Q9NPH2 558 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 STARD10Q9Y365 291 aa18.82■□□□□ 0.6
PDLIM3-203ENST00000284771 FASNP49327 2511 aaKnown RBP18.81■□□□□ 0.6
PDLIM3-203ENST00000284771 TRBV2A0A0J9YWF9 115 aa18.81■□□□□ 0.6
PDLIM3-203ENST00000284771 PRSS44E7EML9 344 aa18.81■□□□□ 0.6
PDLIM3-203ENST00000284771 ABCD4O14678 606 aa18.81■□□□□ 0.6
PDLIM3-203ENST00000284771 PLPP2O43688 288 aa18.81■□□□□ 0.6
PDLIM3-203ENST00000284771 SMPD2O60906 423 aa18.81■□□□□ 0.6
PDLIM3-203ENST00000284771 CRYAAP02489 173 aa18.81■□□□□ 0.6
PDLIM3-203ENST00000284771 LOXP28300 417 aaPredicted RBP18.81■□□□□ 0.6
PDLIM3-203ENST00000284771 CCR9P51686 369 aa18.81■□□□□ 0.6
PDLIM3-203ENST00000284771 UCP2P55851 309 aa18.81■□□□□ 0.6
PDLIM3-203ENST00000284771 ERVS71-1P61550 626 aa18.81■□□□□ 0.6
PDLIM3-203ENST00000284771 TPBGQ13641 420 aa18.81■□□□□ 0.6
PDLIM3-203ENST00000284771 SSX1Q16384 188 aa18.81■□□□□ 0.6
PDLIM3-203ENST00000284771 LIPKQ5VXJ0 399 aa18.81■□□□□ 0.6
PDLIM3-203ENST00000284771 POFUT1Q9H488 388 aa18.81■□□□□ 0.6
PDLIM3-203ENST00000284771 NGBQ9NPG2 151 aa18.81■□□□□ 0.6
PDLIM3-203ENST00000284771 TBCCD1Q9NVR7 557 aa18.81■□□□□ 0.6
PDLIM3-203ENST00000284771 SCOCQ9UIL1 159 aa18.81■□□□□ 0.6
PDLIM3-203ENST00000284771 GCN1Q92616 2671 aaKnown RBP18.8■□□□□ 0.6
PDLIM3-203ENST00000284771 A1L4Q6 167 aa18.8■□□□□ 0.6
PDLIM3-203ENST00000284771 ATP6V1G2-DDX39BF2Z307 99 aa18.8■□□□□ 0.6
PDLIM3-203ENST00000284771 CPEP16870 476 aa18.8■□□□□ 0.6
PDLIM3-203ENST00000284771 PEX19P40855 299 aa18.8■□□□□ 0.6
PDLIM3-203ENST00000284771 TSTQ16762 297 aaKnown RBP18.8■□□□□ 0.6
PDLIM3-203ENST00000284771 ARL9Q6T311 187 aa18.8■□□□□ 0.6
PDLIM3-203ENST00000284771 PHC2Q8IXK0 858 aa18.8■□□□□ 0.6
PDLIM3-203ENST00000284771 OR2AE1Q8NHA4 323 aa18.8■□□□□ 0.6
PDLIM3-203ENST00000284771 HAVCR2Q8TDQ0 301 aa18.8■□□□□ 0.6
PDLIM3-203ENST00000284771 SGK3Q96BR1 496 aa18.8■□□□□ 0.6
PDLIM3-203ENST00000284771 SMIM19Q96E16 107 aa18.8■□□□□ 0.6
PDLIM3-203ENST00000284771 PCSK6P29122 969 aa18.79■□□□□ 0.6
PDLIM3-203ENST00000284771 ALDH3B2P48448 385 aa18.79■□□□□ 0.6
PDLIM3-203ENST00000284771 TAS2R43P59537 309 aa18.79■□□□□ 0.6
PDLIM3-203ENST00000284771 SLC3A1Q07837 685 aa18.79■□□□□ 0.6
PDLIM3-203ENST00000284771 PIAS4Q8N2W9 510 aaPredicted RBP18.79■□□□□ 0.6
PDLIM3-203ENST00000284771 ABHD4Q8TB40 342 aa18.79■□□□□ 0.6
PDLIM3-203ENST00000284771 GHSRQ92847 366 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms