RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 INHBBP09529 407 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 RAC2P15153 192 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 SELEP16581 610 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 TUBG1P23258 451 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 HTR1FP30939 366 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 LIPAP38571 399 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 ZNF121P58317 390 aaPredicted RBP5.58□□□□□ -1.52
CD44-204ENST00000279452 CXCR4P61073 352 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 ELF3P78545 371 aaPredicted RBP5.58□□□□□ -1.52
CD44-204ENST00000279452 TNFAIP6P98066 277 aaPredicted RBP5.58□□□□□ -1.52
CD44-204ENST00000279452 IL5RAQ01344 420 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 POU4F2Q12837 409 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 GK2Q14410 553 aaPredicted RBP5.58□□□□□ -1.52
CD44-204ENST00000279452 PCK2Q16822 640 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 PCGF3Q3KNV8 242 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 GLYATL3Q5SZD4 288 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 AADACL4Q5VUY2 407 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 FAM220AQ7Z4H9 259 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 CIARTQ8N365 385 aaPredicted RBP5.58□□□□□ -1.52
CD44-204ENST00000279452 RFLNBQ8N5W9 214 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 OR10AD1Q8NGE0 317 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 UBASH3BQ8TF42 649 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 RNF133Q8WVZ7 376 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 ASB17Q8WXJ9 295 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 RDH5Q92781 318 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 RNF166Q96A37 237 aaPredicted RBP5.58□□□□□ -1.52
CD44-204ENST00000279452 ELMOD3Q96FG2 381 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 HRASLS5Q96KN8 279 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 APOL4Q9BPW4 351 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 C1QTNF5Q9BXJ0 243 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 MROQ9BYG7 248 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 YIPF3Q9GZM5 350 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 EGLN1Q9GZT9 426 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 OR10A2Q9H208 303 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 MARCH7Q9H992 704 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 ADGRL4Q9HBW9 690 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 TUBG2Q9NRH3 451 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 CLN6Q9NWW5 311 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 TREM2Q9NZC2 230 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 AASSQ9UDR5 926 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 CGGBP1Q9UFW8 167 aaPredicted RBP5.58□□□□□ -1.52
CD44-204ENST00000279452 WARS2Q9UGM6 360 aaKnown RBP5.58□□□□□ -1.52
CD44-204ENST00000279452 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.58□□□□□ -1.52
CD44-204ENST00000279452 LRP12Q9Y561 859 aa5.58□□□□□ -1.52
CD44-204ENST00000279452 CACNA1DQ01668 2161 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 IGHV1-69-2A0A0G2JMI3 117 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 IGHV3-64DA0A0J9YX35 117 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 LOC390937A0A1W2PQ73 354 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 ISPDA4D126 451 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 C5orf63A6NC05 138 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 NDUFS8O00217 210 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 PPIHO43447 177 aaKnown RBP5.57□□□□□ -1.52
CD44-204ENST00000279452 MPZL2O60487 215 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 ICMTO60725 284 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 ENTPD6O75354 484 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 NCR1O76036 304 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 RPP14O95059 124 aaKnown RBP5.57□□□□□ -1.52
CD44-204ENST00000279452 KRT8P05787 483 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 SBK2P0C263 348 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 SLC25A16P16260 332 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 OPRL1P41146 370 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 GPR6P46095 362 aaPredicted RBP5.57□□□□□ -1.52
CD44-204ENST00000279452 MTNR1AP48039 350 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 MMP15P51511 669 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 RIDAP52758 137 aaKnown RBP5.57□□□□□ -1.52
CD44-204ENST00000279452 PSMA6P60900 246 aaKnown RBP5.57□□□□□ -1.52
CD44-204ENST00000279452 ZNF92Q03936 586 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 HFEQ30201 348 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 ZNF829Q3KNS6 432 aaPredicted RBP5.57□□□□□ -1.52
CD44-204ENST00000279452 TMEM255AQ5JRV8 349 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 MEDAGQ5VYS4 303 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 ZNF322Q6U7Q0 402 aaPredicted RBP5.57□□□□□ -1.52
CD44-204ENST00000279452 CLEC9AQ6UXN8 241 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 FBXW12Q6X9E4 464 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 PLEKHG7Q6ZR37 379 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 Q71RC1 249 aaPredicted RBP5.57□□□□□ -1.52
CD44-204ENST00000279452 LURAP1LQ8IV03 231 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 YIPF7Q8N8F6 280 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 OR56B2PQ8NGI1 322 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 C10orf105Q8TEF2 133 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 TRUB1Q8WWH5 349 aaKnown RBP5.57□□□□□ -1.52
CD44-204ENST00000279452 CCL17Q92583 94 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 DVL3Q92997 716 aaPredicted RBP5.57□□□□□ -1.52
CD44-204ENST00000279452 UBE2FQ969M7 185 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 HAVCR1Q96D42 359 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 RNFT2Q96EX2 444 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 REEP6Q96HR9 211 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 Q96MT0 163 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 DIRC2Q96SL1 478 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 MNTQ99583 582 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 SMR3AQ99954 134 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 ADAT1Q9BUB4 502 aaKnown RBP5.57□□□□□ -1.52
CD44-204ENST00000279452 REG4Q9BYZ8 158 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 BPESC1Q9GZL8 116 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 OPA3Q9H6K4 179 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 DCLRE1BQ9H816 532 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 C8orf4Q9NR00 106 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 FAM118AQ9NWS6 357 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 ZDHHC8Q9ULC8 765 aa5.57□□□□□ -1.52
CD44-204ENST00000279452 COPS3Q9UNS2 423 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms