RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 EVI2BP34910 448 aa2.58□□□□□ -2
HERC4-201ENST00000277817 RBMXP38159 391 aaKnown RBP2.58□□□□□ -2
HERC4-201ENST00000277817 OPRD1P41143 372 aa2.58□□□□□ -2
HERC4-201ENST00000277817 CSNK1EP49674 416 aaKnown RBP2.58□□□□□ -2
HERC4-201ENST00000277817 HNRNPFP52597 415 aaKnown RBP2.58□□□□□ -2
HERC4-201ENST00000277817 LIM2P55344 173 aa2.58□□□□□ -2
HERC4-201ENST00000277817 EIF5AP63241 154 aaKnown RBP2.58□□□□□ -2
HERC4-201ENST00000277817 GLO1Q04760 184 aa2.58□□□□□ -2
HERC4-201ENST00000277817 DPTQ07507 201 aa2.58□□□□□ -2
HERC4-201ENST00000277817 GAGE2BQ13066 116 aa2.58□□□□□ -2
HERC4-201ENST00000277817 FAM189A2Q15884 450 aa2.58□□□□□ -2
HERC4-201ENST00000277817 CDKN3Q16667 212 aa2.58□□□□□ -2
HERC4-201ENST00000277817 C2orf68Q2NKX9 166 aa2.58□□□□□ -2
HERC4-201ENST00000277817 GAGE2EQ4V326 116 aa2.58□□□□□ -2
HERC4-201ENST00000277817 PRAMEF7Q5VXH5 474 aa2.58□□□□□ -2
HERC4-201ENST00000277817 SAXO2Q658L1 398 aa2.58□□□□□ -2
HERC4-201ENST00000277817 EIF5AL1Q6IS14 154 aaKnown RBP2.58□□□□□ -2
HERC4-201ENST00000277817 GAGE2AQ6NT46 116 aa2.58□□□□□ -2
HERC4-201ENST00000277817 RPL22L1Q6P5R6 122 aaKnown RBP2.58□□□□□ -2
HERC4-201ENST00000277817 DPY19L4Q7Z388 723 aa2.58□□□□□ -2
HERC4-201ENST00000277817 SLC35F3Q8IY50 421 aa2.58□□□□□ -2
HERC4-201ENST00000277817 CLDN22Q8N7P3 220 aa2.58□□□□□ -2
HERC4-201ENST00000277817 OR5L2Q8NGL0 311 aa2.58□□□□□ -2
HERC4-201ENST00000277817 ZNF775Q96BV0 537 aaPredicted RBP2.58□□□□□ -2
HERC4-201ENST00000277817 OR5B2Q96R09 309 aa2.58□□□□□ -2
HERC4-201ENST00000277817 OR14A2Q96R54 314 aa2.58□□□□□ -2
HERC4-201ENST00000277817 TEAD3Q99594 435 aa2.58□□□□□ -2
HERC4-201ENST00000277817 MAP3K3Q99759 626 aa2.58□□□□□ -2
HERC4-201ENST00000277817 PIMREGQ9BSJ6 248 aa2.58□□□□□ -2
HERC4-201ENST00000277817 OR52A5Q9H2C5 316 aa2.58□□□□□ -2
HERC4-201ENST00000277817 AUNIPQ9H7T9 357 aa2.58□□□□□ -2
HERC4-201ENST00000277817 SIAEQ9HAT2 523 aa2.58□□□□□ -2
HERC4-201ENST00000277817 RBFOX1Q9NWB1 397 aaKnown RBP2.58□□□□□ -2
HERC4-201ENST00000277817 TAS2R8Q9NYW2 309 aa2.58□□□□□ -2
HERC4-201ENST00000277817 DHCR7Q9UBM7 475 aaKnown RBP2.58□□□□□ -2
HERC4-201ENST00000277817 GAGE2DQ9UEU5 116 aa2.58□□□□□ -2
HERC4-201ENST00000277817 YBX2Q9Y2T7 364 aaKnown RBP2.58□□□□□ -2
HERC4-201ENST00000277817 NUBP2Q9Y5Y2 271 aa2.58□□□□□ -2
HERC4-201ENST00000277817 NAV2Q8IVL1 2488 aa2.57□□□□□ -2
HERC4-201ENST00000277817 TMEM269A0A1B0GVZ9 245 aa2.57□□□□□ -2
HERC4-201ENST00000277817 TMEM129A0AVI4 362 aa2.57□□□□□ -2
HERC4-201ENST00000277817 ZNF850A8MQ14 1090 aa2.57□□□□□ -2
HERC4-201ENST00000277817 M0R036 132 aa2.57□□□□□ -2
HERC4-201ENST00000277817 ZNF593O00488 134 aaPredicted RBP2.57□□□□□ -2
HERC4-201ENST00000277817 NUPL2O15504 423 aaKnown RBP2.57□□□□□ -2
HERC4-201ENST00000277817 FABP7O15540 132 aa2.57□□□□□ -2
HERC4-201ENST00000277817 RRP8O43159 456 aaKnown RBP2.57□□□□□ -2
HERC4-201ENST00000277817 OR2T1O43869 369 aa2.57□□□□□ -2
HERC4-201ENST00000277817 SRPX2O60687 465 aaPredicted RBP2.57□□□□□ -2
HERC4-201ENST00000277817 RAB3DO95716 219 aa2.57□□□□□ -2
HERC4-201ENST00000277817 EGFP01133 1207 aa2.57□□□□□ -2
HERC4-201ENST00000277817 STAG3L3P0CL85 134 aa2.57□□□□□ -2
HERC4-201ENST00000277817 CHRNB1P11230 501 aa2.57□□□□□ -2
HERC4-201ENST00000277817 NR2C1P13056 603 aa2.57□□□□□ -2
HERC4-201ENST00000277817 ARSBP15848 533 aa2.57□□□□□ -2
HERC4-201ENST00000277817 ANXA7P20073 488 aaKnown RBP2.57□□□□□ -2
HERC4-201ENST00000277817 IL32P24001 234 aa2.57□□□□□ -2
HERC4-201ENST00000277817 MPZP25189 248 aa2.57□□□□□ -2
HERC4-201ENST00000277817 CD38P28907 300 aa2.57□□□□□ -2
HERC4-201ENST00000277817 TACR3P29371 465 aa2.57□□□□□ -2
HERC4-201ENST00000277817 POU3F4P49335 361 aa2.57□□□□□ -2
HERC4-201ENST00000277817 SRP9P49458 86 aaKnown RBP2.57□□□□□ -2
HERC4-201ENST00000277817 EMP2P54851 167 aa2.57□□□□□ -2
HERC4-201ENST00000277817 CXADRP78310 365 aa2.57□□□□□ -2
HERC4-201ENST00000277817 MFGE8Q08431 387 aaPredicted RBP2.57□□□□□ -2
HERC4-201ENST00000277817 CTF1Q16619 201 aa2.57□□□□□ -2
HERC4-201ENST00000277817 AWAT2Q6E213 333 aa2.57□□□□□ -2
HERC4-201ENST00000277817 XAF1Q6GPH4 301 aa2.57□□□□□ -2
HERC4-201ENST00000277817 ELP2Q6IA86 826 aa2.57□□□□□ -2
HERC4-201ENST00000277817 SFXN4Q6P4A7 337 aa2.57□□□□□ -2
HERC4-201ENST00000277817 FAHD1Q6P587 224 aa2.57□□□□□ -2
HERC4-201ENST00000277817 ZNF767PQ75MW2 155 aa2.57□□□□□ -2
HERC4-201ENST00000277817 CALHM3Q86XJ0 350 aa2.57□□□□□ -2
HERC4-201ENST00000277817 GALNT16Q8N428 558 aa2.57□□□□□ -2
HERC4-201ENST00000277817 ZNF565Q8N9K5 539 aa2.57□□□□□ -2
HERC4-201ENST00000277817 CCDC54Q8NEL0 328 aa2.57□□□□□ -2
HERC4-201ENST00000277817 OR7G2Q8NG99 324 aa2.57□□□□□ -2
HERC4-201ENST00000277817 RNF183Q96D59 192 aa2.57□□□□□ -2
HERC4-201ENST00000277817 NEDD4LQ96PU5 975 aa2.57□□□□□ -2
HERC4-201ENST00000277817 FYTTD1Q96QD9 318 aaKnown RBP2.57□□□□□ -2
HERC4-201ENST00000277817 SDF2Q99470 211 aa2.57□□□□□ -2
HERC4-201ENST00000277817 CDCA3Q99618 268 aaPredicted RBP2.57□□□□□ -2
HERC4-201ENST00000277817 NRTNQ99748 197 aa2.57□□□□□ -2
HERC4-201ENST00000277817 PDCD1LG2Q9BQ51 273 aa2.57□□□□□ -2
HERC4-201ENST00000277817 URM1Q9BTM9 101 aaKnown RBP2.57□□□□□ -2
HERC4-201ENST00000277817 ALG12Q9BV10 488 aa2.57□□□□□ -2
HERC4-201ENST00000277817 ST6GALNAC5Q9BVH7 336 aa2.57□□□□□ -2
HERC4-201ENST00000277817 SLA2Q9H6Q3 261 aa2.57□□□□□ -2
HERC4-201ENST00000277817 METTL17Q9H7H0 456 aaPredicted RBP2.57□□□□□ -2
HERC4-201ENST00000277817 MCCC2Q9HCC0 563 aa2.57□□□□□ -2
HERC4-201ENST00000277817 GALNT9Q9HCQ5 603 aa2.57□□□□□ -2
HERC4-201ENST00000277817 INIPQ9NRY2 104 aa2.57□□□□□ -2
HERC4-201ENST00000277817 ONECUT1Q9UBC0 465 aa2.57□□□□□ -2
HERC4-201ENST00000277817 TESQ9UGI8 421 aaKnown RBP2.57□□□□□ -2
HERC4-201ENST00000277817 PRELID1Q9Y255 219 aa2.57□□□□□ -2
HERC4-201ENST00000277817 KCNIP3Q9Y2W7 256 aa2.57□□□□□ -2
HERC4-201ENST00000277817 ADAMTS20P59510 1910 aa2.57□□□□□ -2
HERC4-201ENST00000277817 GOLGB1Q14789 3259 aaKnown RBP2.57□□□□□ -2
HERC4-201ENST00000277817 A0A0G2JMP0 313 aa2.57□□□□□ -2
HERC4-201ENST00000277817 A0A1B0GV50 99 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms