RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 RCC2Q9P258 522 aaKnown RBP11.54□□□□□ -0.56
COL8A1-202ENST00000273342 SPAG17Q6Q759 2223 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 C17orf105B2RV13 164 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 TMEM127O75204 238 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 ARRB1P49407 418 aaPredicted RBP11.54□□□□□ -0.56
COL8A1-202ENST00000273342 NR0B1P51843 470 aaKnown RBP11.54□□□□□ -0.56
COL8A1-202ENST00000273342 RAB5BP61020 215 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 ZNF260Q3ZCT1 412 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 KCTD18Q6PI47 426 aaPredicted RBP11.54□□□□□ -0.56
COL8A1-202ENST00000273342 LINC00469Q8N7U9 141 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 TMEM41AQ96HV5 264 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 OR10C1Q96KK4 312 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 SULT4A1Q9BR01 284 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 IL23AQ9NPF7 189 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 MMP26Q9NRE1 261 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 CARHSP1Q9Y2V2 147 aaKnown RBP11.54□□□□□ -0.56
COL8A1-202ENST00000273342 TMEM184BQ9Y519 407 aaPredicted RBP11.54□□□□□ -0.56
COL8A1-202ENST00000273342 TEX13DA0A0J9YY54 714 aaPredicted RBP11.54□□□□□ -0.56
COL8A1-202ENST00000273342 COLCA2A8K830 154 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 KNG1P01042 644 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 RNH1P13489 461 aaKnown RBP11.54□□□□□ -0.56
COL8A1-202ENST00000273342 FABP9Q0Z7S8 132 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 CCINQ13939 588 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 MEF2DQ14814 521 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 EIF2S3LQ2VIR3 472 aaKnown RBP11.54□□□□□ -0.56
COL8A1-202ENST00000273342 DRAM2Q6UX65 266 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 TMPRSS9Q7Z410 1059 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.54□□□□□ -0.56
COL8A1-202ENST00000273342 SLC37A2Q8TED4 501 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 ELSPBP1Q96BH3 223 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 SEC11CQ9BY50 192 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 LPAR3Q9UBY5 353 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 OR52A1Q9UKL2 312 aa11.54□□□□□ -0.56
COL8A1-202ENST00000273342 A0A0J9YY10 115 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 PQLC2LA1A4F0 135 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 A6NLC8 198 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 M0R036 132 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 PLRG1O43660 514 aaKnown RBP11.53□□□□□ -0.56
COL8A1-202ENST00000273342 DUS4LO95620 317 aaKnown RBP11.53□□□□□ -0.56
COL8A1-202ENST00000273342 MELTFP08582 738 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 COL9A1P20849 921 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 ABCD3P28288 659 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 ZNF117Q03924 483 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 ALG11Q2TAA5 492 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 TMEM196Q5HYL7 178 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 PPP1R3BQ86XI6 285 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 CATSPERDQ86XM0 798 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 IP6K3Q96PC2 410 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 SOX7Q9BT81 388 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 ST6GALNAC5Q9BVH7 336 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 CHRDQ9H2X0 955 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 hCG_1809904A0A1W2PP81 198 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 A0A1W2PR64 198 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 A0A1W2PRV1 198 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 CLDN4O14493 209 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 MPIG6BO95866 241 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 OPN1LWP04000 364 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 VSIG8P0DPA2 414 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 NQO2P16083 231 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 FOXL2P58012 376 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 SSBP1Q04837 148 aaKnown RBP11.53□□□□□ -0.56
COL8A1-202ENST00000273342 NFATC4Q14934 902 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 CDCP2Q5VXM1 449 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 AWAT2Q6E213 333 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 OR2A2Q6IF42 318 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 DHRS11Q6UWP2 260 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 ZNF784Q8NCA9 323 aaPredicted RBP11.53□□□□□ -0.56
COL8A1-202ENST00000273342 SLC30A7Q8NEW0 376 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 SEMA6DQ8NFY4 1073 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 OR5D18Q8NGL1 313 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 ASB13Q8WXK3 278 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 C8orf44Q96CB5 159 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 NECAB3Q96P71 396 aaPredicted RBP11.53□□□□□ -0.56
COL8A1-202ENST00000273342 BCL2L14Q9BZR8 327 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 SLC17A5Q9NRA2 495 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 GHRLQ9UBU3 117 aa11.53□□□□□ -0.56
COL8A1-202ENST00000273342 C1orf196B1AJZ1 125 aa11.52□□□□□ -0.56
COL8A1-202ENST00000273342 MBTPS2O43462 519 aa11.52□□□□□ -0.56
COL8A1-202ENST00000273342 ARG1P05089 322 aa11.52□□□□□ -0.56
COL8A1-202ENST00000273342 OR8U9P0C7N5 309 aa11.52□□□□□ -0.56
COL8A1-202ENST00000273342 ZNF44P15621 663 aa11.52□□□□□ -0.56
COL8A1-202ENST00000273342 ZNF14P17017 642 aaPredicted RBP11.52□□□□□ -0.56
COL8A1-202ENST00000273342 RAB6AP20340 208 aa11.52□□□□□ -0.56
COL8A1-202ENST00000273342 TEX30Q5JUR7 227 aa11.52□□□□□ -0.56
COL8A1-202ENST00000273342 ADAM5Q6NVV9 412 aa11.52□□□□□ -0.56
COL8A1-202ENST00000273342 CLEC18BQ6UXF7 455 aa11.52□□□□□ -0.56
COL8A1-202ENST00000273342 ANGPTL5Q86XS5 388 aa11.52□□□□□ -0.56
COL8A1-202ENST00000273342 C7orf61Q8IZ16 206 aa11.52□□□□□ -0.56
COL8A1-202ENST00000273342 TMEM104Q8NE00 496 aa11.52□□□□□ -0.56
COL8A1-202ENST00000273342 OR8U1Q8NH10 309 aa11.52□□□□□ -0.56
COL8A1-202ENST00000273342 AQP3Q92482 292 aa11.52□□□□□ -0.56
COL8A1-202ENST00000273342 FGF14Q92915 247 aa11.52□□□□□ -0.56
COL8A1-202ENST00000273342 ADAT3Q96EY9 351 aaPredicted RBP11.52□□□□□ -0.56
COL8A1-202ENST00000273342 SLCO5A1Q9H2Y9 848 aa11.52□□□□□ -0.56
COL8A1-202ENST00000273342 DZANK1Q9NVP4 752 aa11.52□□□□□ -0.56
COL8A1-202ENST00000273342 MIOXQ9UGB7 285 aa11.52□□□□□ -0.56
COL8A1-202ENST00000273342 TTLL8A6PVC2 850 aa11.52□□□□□ -0.57
COL8A1-202ENST00000273342 SOCS1O15524 211 aa11.52□□□□□ -0.57
COL8A1-202ENST00000273342 NDUFS6O75380 124 aaKnown RBP11.52□□□□□ -0.57
COL8A1-202ENST00000273342 GLI4P10075 376 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms