RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 DMRTA2Q96SC8 542 aa14.77□□□□□ -0.05
VPS54-201ENST00000272322 ZNF768Q9H5H4 540 aaKnown RBP14.77□□□□□ -0.05
VPS54-201ENST00000272322 SOCS1O15524 211 aa14.76□□□□□ -0.05
VPS54-201ENST00000272322 ZFAND5O76080 213 aa14.76□□□□□ -0.05
VPS54-201ENST00000272322 UNC119Q13432 240 aa14.76□□□□□ -0.05
VPS54-201ENST00000272322 ATPAF1Q5TC12 328 aaPredicted RBP14.76□□□□□ -0.05
VPS54-201ENST00000272322 LYSMD4Q5XG99 296 aa14.76□□□□□ -0.05
VPS54-201ENST00000272322 GLIPR1L1Q6UWM5 242 aa14.76□□□□□ -0.05
VPS54-201ENST00000272322 HLA-CQ95604 372 aa14.76□□□□□ -0.05
VPS54-201ENST00000272322 SPSB2Q99619 263 aa14.76□□□□□ -0.05
VPS54-201ENST00000272322 E9PLN8 166 aa14.76□□□□□ -0.05
VPS54-201ENST00000272322 IGHV3-9P01782 118 aa14.76□□□□□ -0.05
VPS54-201ENST00000272322 IFNA6P05013 189 aa14.76□□□□□ -0.05
VPS54-201ENST00000272322 LPLP06858 475 aa14.76□□□□□ -0.05
VPS54-201ENST00000272322 GLI4P10075 376 aa14.76□□□□□ -0.05
VPS54-201ENST00000272322 PNLIPP16233 465 aa14.76□□□□□ -0.05
VPS54-201ENST00000272322 S100A11P31949 105 aa14.76□□□□□ -0.05
VPS54-201ENST00000272322 TAS2R19P59542 299 aa14.76□□□□□ -0.05
VPS54-201ENST00000272322 DHRS2Q13268 280 aa14.76□□□□□ -0.05
VPS54-201ENST00000272322 AANATQ16613 207 aa14.76□□□□□ -0.05
VPS54-201ENST00000272322 NARS2Q96I59 477 aaKnown RBP14.76□□□□□ -0.05
VPS54-201ENST00000272322 POTEKPQ9BYX7 375 aa14.76□□□□□ -0.05
VPS54-201ENST00000272322 SRPK3Q9UPE1 567 aa14.76□□□□□ -0.05
VPS54-201ENST00000272322 LHFPL6Q9Y693 200 aa14.76□□□□□ -0.05
VPS54-201ENST00000272322 BDP1A6H8Y1 2624 aa14.76□□□□□ -0.05
VPS54-201ENST00000272322 CRTAPO75718 401 aaPredicted RBP14.76□□□□□ -0.05
VPS54-201ENST00000272322 GIPP09681 153 aaPredicted RBP14.76□□□□□ -0.05
VPS54-201ENST00000272322 VSIG8P0DPA2 414 aa14.76□□□□□ -0.05
VPS54-201ENST00000272322 APOBEC1P41238 236 aaKnown RBP14.76□□□□□ -0.05
VPS54-201ENST00000272322 NPY4RP50391 375 aa14.76□□□□□ -0.05
VPS54-201ENST00000272322 AKR1C2P52895 323 aa14.76□□□□□ -0.05
VPS54-201ENST00000272322 CAPZA1P52907 286 aa14.76□□□□□ -0.05
VPS54-201ENST00000272322 ACY1Q03154 408 aa14.76□□□□□ -0.05
VPS54-201ENST00000272322 AKR1C1Q04828 323 aa14.76□□□□□ -0.05
VPS54-201ENST00000272322 ELP2Q6IA86 826 aa14.76□□□□□ -0.05
VPS54-201ENST00000272322 ZNF546Q86UE3 836 aa14.76□□□□□ -0.05
VPS54-201ENST00000272322 ADAD2Q8NCV1 583 aaKnown RBP14.76□□□□□ -0.05
VPS54-201ENST00000272322 MFSD8Q8NHS3 518 aa14.76□□□□□ -0.05
VPS54-201ENST00000272322 ZNF837Q96EG3 531 aaPredicted RBP14.76□□□□□ -0.05
VPS54-201ENST00000272322 CMTM3Q96MX0 182 aa14.76□□□□□ -0.05
VPS54-201ENST00000272322 CST11Q9H112 138 aa14.76□□□□□ -0.05
VPS54-201ENST00000272322 ZNF275Q9NSD4 429 aaPredicted RBP14.76□□□□□ -0.05
VPS54-201ENST00000272322 TAS2R8Q9NYW2 309 aa14.76□□□□□ -0.05
VPS54-201ENST00000272322 FREM1Q5H8C1 2179 aa14.75□□□□□ -0.05
VPS54-201ENST00000272322 METTL21EPA6NDL7 271 aa14.75□□□□□ -0.05
VPS54-201ENST00000272322 RLN2P04090 185 aa14.75□□□□□ -0.05
VPS54-201ENST00000272322 RFC3P40938 356 aa14.75□□□□□ -0.05
VPS54-201ENST00000272322 ACTBP60709 375 aa14.75□□□□□ -0.05
VPS54-201ENST00000272322 ACTG1P63261 375 aa14.75□□□□□ -0.05
VPS54-201ENST00000272322 TMEM244Q5VVB8 128 aa14.75□□□□□ -0.05
VPS54-201ENST00000272322 SEZ6L2Q6UXD5 910 aa14.75□□□□□ -0.05
VPS54-201ENST00000272322 TMEM156Q8N614 296 aa14.75□□□□□ -0.05
VPS54-201ENST00000272322 RAB33BQ9H082 229 aa14.75□□□□□ -0.05
VPS54-201ENST00000272322 WIF1Q9Y5W5 379 aa14.75□□□□□ -0.05
VPS54-201ENST00000272322 C5orf51A6NDU8 294 aa14.75□□□□□ -0.05
VPS54-201ENST00000272322 RP2O75695 350 aa14.75□□□□□ -0.05
VPS54-201ENST00000272322 LDOC1O95751 146 aaPredicted RBP14.75□□□□□ -0.05
VPS54-201ENST00000272322 ARPC4P59998 168 aa14.75□□□□□ -0.05
VPS54-201ENST00000272322 ARFRP1Q13795 201 aa14.75□□□□□ -0.05
VPS54-201ENST00000272322 UNQ6126/PRO20091Q6UXV3 157 aa14.75□□□□□ -0.05
VPS54-201ENST00000272322 PAQR4Q8N4S7 273 aaPredicted RBP14.75□□□□□ -0.05
VPS54-201ENST00000272322 OR1M1Q8NGA1 313 aa14.75□□□□□ -0.05
VPS54-201ENST00000272322 ROBO4Q8WZ75 1007 aa14.75□□□□□ -0.05
VPS54-201ENST00000272322 PIGTQ969N2 578 aa14.75□□□□□ -0.05
VPS54-201ENST00000272322 LINC00052Q96N35 136 aa14.75□□□□□ -0.05
VPS54-201ENST00000272322 C12orf10Q9HB07 376 aa14.75□□□□□ -0.05
VPS54-201ENST00000272322 VSIG4Q9Y279 399 aa14.75□□□□□ -0.05
VPS54-201ENST00000272322 OR5H15A6NDH6 313 aa14.75□□□□□ -0.05
VPS54-201ENST00000272322 RAB27BO00194 218 aa14.75□□□□□ -0.05
VPS54-201ENST00000272322 CD34P28906 385 aa14.75□□□□□ -0.05
VPS54-201ENST00000272322 CD96P40200 585 aa14.75□□□□□ -0.05
VPS54-201ENST00000272322 SLC9A3R2Q15599 337 aa14.75□□□□□ -0.05
VPS54-201ENST00000272322 PLPPR5Q32ZL2 321 aa14.75□□□□□ -0.05
VPS54-201ENST00000272322 BRICD5Q6PL45 260 aa14.75□□□□□ -0.05
VPS54-201ENST00000272322 ZNF75AQ96N20 296 aa14.75□□□□□ -0.05
VPS54-201ENST00000272322 ZNF385AQ96PM9 386 aaKnown RBP14.75□□□□□ -0.05
VPS54-201ENST00000272322 MRI1Q9BV20 369 aa14.75□□□□□ -0.05
VPS54-201ENST00000272322 RIF1Q5UIP0 2472 aaKnown RBP14.74□□□□□ -0.05
VPS54-201ENST00000272322 A6NIZ1 184 aa14.74□□□□□ -0.05
VPS54-201ENST00000272322 RAP1BP61224 184 aa14.74□□□□□ -0.05
VPS54-201ENST00000272322 RAP1AP62834 184 aa14.74□□□□□ -0.05
VPS54-201ENST00000272322 BTN1A1Q13410 526 aa14.74□□□□□ -0.05
VPS54-201ENST00000272322 PPP1R1AQ13522 171 aa14.74□□□□□ -0.05
VPS54-201ENST00000272322 PDCD1Q15116 288 aa14.74□□□□□ -0.05
VPS54-201ENST00000272322 MARCH1Q8TCQ1 289 aa14.74□□□□□ -0.05
VPS54-201ENST00000272322 RADILQ96JH8 1075 aa14.74□□□□□ -0.05
VPS54-201ENST00000272322 KCNK7Q9Y2U2 307 aa14.74□□□□□ -0.05
VPS54-201ENST00000272322 OR2M5A3KFT3 312 aa14.74□□□□□ -0.05
VPS54-201ENST00000272322 CCL3P10147 92 aa14.74□□□□□ -0.05
VPS54-201ENST00000272322 MAP2K6P52564 334 aa14.74□□□□□ -0.05
VPS54-201ENST00000272322 IL13RA1P78552 427 aa14.74□□□□□ -0.05
VPS54-201ENST00000272322 WDR74Q6RFH5 385 aaPredicted RBP14.74□□□□□ -0.05
VPS54-201ENST00000272322 WDSUB1Q8N9V3 476 aa14.74□□□□□ -0.05
VPS54-201ENST00000272322 OR8B12Q8NGG6 310 aa14.74□□□□□ -0.05
VPS54-201ENST00000272322 OR13C8Q8NGS7 320 aa14.74□□□□□ -0.05
VPS54-201ENST00000272322 ST8SIA1Q92185 356 aa14.74□□□□□ -0.05
VPS54-201ENST00000272322 IGHG1P01857 330 aa14.74□□□□□ -0.05
VPS54-201ENST00000272322 ERCC1P07992 297 aaPredicted RBP14.74□□□□□ -0.05
VPS54-201ENST00000272322 FOSL2P15408 326 aa14.74□□□□□ -0.05
VPS54-201ENST00000272322 RAB3AP20336 220 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms