RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 HCAR1Q9BXC0 346 aa12.74□□□□□ -0.37
SOD1-201ENST00000270142 FN3KQ9H479 309 aa12.74□□□□□ -0.37
SOD1-201ENST00000270142 PNRC2Q9NPJ4 139 aaKnown RBP12.74□□□□□ -0.37
SOD1-201ENST00000270142 RPRD1BQ9NQG5 326 aaKnown RBP12.74□□□□□ -0.37
SOD1-201ENST00000270142 ZNF446Q9NWS9 450 aa12.74□□□□□ -0.37
SOD1-201ENST00000270142 ARPC3O15145 178 aa12.73□□□□□ -0.37
SOD1-201ENST00000270142 SEMG1P04279 462 aa12.73□□□□□ -0.37
SOD1-201ENST00000270142 GATA4P43694 442 aa12.73□□□□□ -0.37
SOD1-201ENST00000270142 PITPNBP48739 271 aa12.73□□□□□ -0.37
SOD1-201ENST00000270142 RAD23AP54725 363 aa12.73□□□□□ -0.37
SOD1-201ENST00000270142 IL13RA1P78552 427 aa12.73□□□□□ -0.37
SOD1-201ENST00000270142 SPIBQ01892 262 aa12.73□□□□□ -0.37
SOD1-201ENST00000270142 TRAP1Q12931 704 aaKnown RBP12.73□□□□□ -0.37
SOD1-201ENST00000270142 KRT72Q14CN4 511 aa12.73□□□□□ -0.37
SOD1-201ENST00000270142 PRAMEF6Q5VXH4 476 aa12.73□□□□□ -0.37
SOD1-201ENST00000270142 LYPD2Q6UXB3 125 aa12.73□□□□□ -0.37
SOD1-201ENST00000270142 NLRC3Q7RTR2 1065 aa12.73□□□□□ -0.37
SOD1-201ENST00000270142 ZBTB46Q86UZ6 589 aa12.73□□□□□ -0.37
SOD1-201ENST00000270142 FITM2Q8N6M3 262 aa12.73□□□□□ -0.37
SOD1-201ENST00000270142 RNF148Q8N7C7 305 aa12.73□□□□□ -0.37
SOD1-201ENST00000270142 SDR9C7Q8NEX9 313 aa12.73□□□□□ -0.37
SOD1-201ENST00000270142 ATF6BQ99941 703 aa12.73□□□□□ -0.37
SOD1-201ENST00000270142 NUDT16L1Q9BRJ7 211 aaKnown RBP12.73□□□□□ -0.37
SOD1-201ENST00000270142 SPAG4Q9NPE6 437 aa12.73□□□□□ -0.37
SOD1-201ENST00000270142 KIR2DS1A0A191URI9 304 aa12.72□□□□□ -0.37
SOD1-201ENST00000270142 FAM20BO75063 409 aa12.72□□□□□ -0.37
SOD1-201ENST00000270142 GADD45GO95257 159 aa12.72□□□□□ -0.37
SOD1-201ENST00000270142 LCATP04180 440 aa12.72□□□□□ -0.37
SOD1-201ENST00000270142 IRF2P14316 349 aa12.72□□□□□ -0.37
SOD1-201ENST00000270142 GGT2P36268 569 aa12.72□□□□□ -0.37
SOD1-201ENST00000270142 CD200P41217 278 aa12.72□□□□□ -0.37
SOD1-201ENST00000270142 CLEC12AQ5QGZ9 265 aa12.72□□□□□ -0.37
SOD1-201ENST00000270142 WDR25Q64LD2 544 aaPredicted RBP12.72□□□□□ -0.37
SOD1-201ENST00000270142 BRD3OSQ6XYD6 125 aa12.72□□□□□ -0.37
SOD1-201ENST00000270142 ZNF841Q6ZN19 808 aa12.72□□□□□ -0.37
SOD1-201ENST00000270142 DCDC5Q6ZRR9 648 aa12.72□□□□□ -0.37
SOD1-201ENST00000270142 CELF2-AS1Q8N7Q2 184 aa12.72□□□□□ -0.37
SOD1-201ENST00000270142 Q8TCH9 128 aa12.72□□□□□ -0.37
SOD1-201ENST00000270142 SLCO4A1Q96BD0 722 aa12.72□□□□□ -0.37
SOD1-201ENST00000270142 IFT27Q9BW83 186 aa12.72□□□□□ -0.37
SOD1-201ENST00000270142 CDADC1Q9BWV3 514 aa12.72□□□□□ -0.37
SOD1-201ENST00000270142 MYLK2Q9H1R3 596 aa12.72□□□□□ -0.37
SOD1-201ENST00000270142 MRPL22Q9NWU5 206 aaKnown RBP12.72□□□□□ -0.37
SOD1-201ENST00000270142 ADA2Q9NZK5 511 aa12.72□□□□□ -0.37
SOD1-201ENST00000270142 CLN8Q9UBY8 286 aa12.72□□□□□ -0.37
SOD1-201ENST00000270142 CYB5R1Q9UHQ9 305 aa12.72□□□□□ -0.37
SOD1-201ENST00000270142 OR6C68A6NDL8 312 aa12.71□□□□□ -0.37
SOD1-201ENST00000270142 C22orf46C9J442 243 aa12.71□□□□□ -0.37
SOD1-201ENST00000270142 HOXA3O43365 443 aaPredicted RBP12.71□□□□□ -0.37
SOD1-201ENST00000270142 OR10H3O60404 316 aa12.71□□□□□ -0.37
SOD1-201ENST00000270142 HLA-DQA2P01906 255 aa12.71□□□□□ -0.37
SOD1-201ENST00000270142 MDKP21741 143 aaPredicted RBP12.71□□□□□ -0.37
SOD1-201ENST00000270142 ANOS1P23352 680 aa12.71□□□□□ -0.37
SOD1-201ENST00000270142 FGF12P61328 243 aa12.71□□□□□ -0.37
SOD1-201ENST00000270142 MPPED2Q15777 294 aa12.71□□□□□ -0.37
SOD1-201ENST00000270142 DEFB112Q30KQ8 113 aa12.71□□□□□ -0.37
SOD1-201ENST00000270142 SLC36A3Q495N2 470 aa12.71□□□□□ -0.37
SOD1-201ENST00000270142 C16orf87Q6PH81 154 aa12.71□□□□□ -0.37
SOD1-201ENST00000270142 PGAP1Q75T13 922 aa12.71□□□□□ -0.37
SOD1-201ENST00000270142 OR10S1Q8NGN2 331 aa12.71□□□□□ -0.37
SOD1-201ENST00000270142 OR2AJ1Q8NGZ0 328 aa12.71□□□□□ -0.37
SOD1-201ENST00000270142 ERGIC1Q969X5 290 aa12.71□□□□□ -0.37
SOD1-201ENST00000270142 CMTM5Q96DZ9 223 aa12.71□□□□□ -0.37
SOD1-201ENST00000270142 PYURFQ96I23 114 aa12.71□□□□□ -0.37
SOD1-201ENST00000270142 MAP6Q96JE9 813 aa12.71□□□□□ -0.37
SOD1-201ENST00000270142 GORASP2Q9H8Y8 452 aa12.71□□□□□ -0.37
SOD1-201ENST00000270142 UFSP2Q9NUQ7 469 aa12.71□□□□□ -0.37
SOD1-201ENST00000270142 TMCC3Q9ULS5 477 aa12.71□□□□□ -0.37
SOD1-201ENST00000270142 POM121CA8CG34 1229 aa12.7□□□□□ -0.38
SOD1-201ENST00000270142 M0R135 149 aa12.7□□□□□ -0.38
SOD1-201ENST00000270142 PHYHO14832 338 aa12.7□□□□□ -0.38
SOD1-201ENST00000270142 GMNNO75496 209 aa12.7□□□□□ -0.38
SOD1-201ENST00000270142 NOS3P29474 1203 aa12.7□□□□□ -0.38
SOD1-201ENST00000270142 PSMB10P40306 273 aa12.7□□□□□ -0.38
SOD1-201ENST00000270142 RPS27P42677 84 aaKnown RBP12.7□□□□□ -0.38
SOD1-201ENST00000270142 SMIM11AP58511 58 aa12.7□□□□□ -0.38
SOD1-201ENST00000270142 ECH1Q13011 328 aa12.7□□□□□ -0.38
SOD1-201ENST00000270142 MALLQ13021 153 aa12.7□□□□□ -0.38
SOD1-201ENST00000270142 SNAI3Q3KNW1 292 aa12.7□□□□□ -0.38
SOD1-201ENST00000270142 ZNF620Q6ZNG0 422 aa12.7□□□□□ -0.38
SOD1-201ENST00000270142 SPATC1Q76KD6 591 aa12.7□□□□□ -0.38
SOD1-201ENST00000270142 MRPL21Q7Z2W9 205 aaKnown RBP12.7□□□□□ -0.38
SOD1-201ENST00000270142 OR11L1Q8NGX0 322 aa12.7□□□□□ -0.38
SOD1-201ENST00000270142 SPRYD4Q8WW59 207 aaPredicted RBP12.7□□□□□ -0.38
SOD1-201ENST00000270142 ZNF799Q96GE5 643 aa12.7□□□□□ -0.38
SOD1-201ENST00000270142 CTSZQ9UBR2 303 aa12.7□□□□□ -0.38
SOD1-201ENST00000270142 MGAM2Q2M2H8 2515 aa12.69□□□□□ -0.38
SOD1-201ENST00000270142 ENSAO43768 121 aaKnown RBP12.69□□□□□ -0.38
SOD1-201ENST00000270142 PSKH1P11801 424 aa12.69□□□□□ -0.38
SOD1-201ENST00000270142 CA6P23280 308 aa12.69□□□□□ -0.38
SOD1-201ENST00000270142 OMGP23515 440 aa12.69□□□□□ -0.38
SOD1-201ENST00000270142 PRDX6P30041 224 aa12.69□□□□□ -0.38
SOD1-201ENST00000270142 RRM2P31350 389 aa12.69□□□□□ -0.38
SOD1-201ENST00000270142 PYCR1P32322 319 aa12.69□□□□□ -0.38
SOD1-201ENST00000270142 GSSP48637 474 aa12.69□□□□□ -0.38
SOD1-201ENST00000270142 TPTEP56180 551 aa12.69□□□□□ -0.38
SOD1-201ENST00000270142 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.69□□□□□ -0.38
SOD1-201ENST00000270142 OR8G1Q15617 311 aa12.69□□□□□ -0.38
SOD1-201ENST00000270142 SLC35F1Q5T1Q4 408 aa12.69□□□□□ -0.38
SOD1-201ENST00000270142 RUSC1-AS1Q66K80 236 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms