RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 RPS23P62266 143 aaKnown RBP12.28□□□□□ -0.44
SSBP1-201ENST00000265304 ACTA2P62736 377 aa12.28□□□□□ -0.44
SSBP1-201ENST00000265304 ACTG2P63267 376 aa12.28□□□□□ -0.44
SSBP1-201ENST00000265304 MRPL28Q13084 256 aaKnown RBP12.28□□□□□ -0.44
SSBP1-201ENST00000265304 EFNB3Q15768 340 aa12.28□□□□□ -0.44
SSBP1-201ENST00000265304 MSMPQ1L6U9 139 aa12.28□□□□□ -0.44
SSBP1-201ENST00000265304 LIPNQ5VXI9 398 aa12.28□□□□□ -0.44
SSBP1-201ENST00000265304 MBNL2Q5VZF2 373 aaKnown RBP12.28□□□□□ -0.44
SSBP1-201ENST00000265304 ALKBH2Q6NS38 261 aa12.28□□□□□ -0.44
SSBP1-201ENST00000265304 FBXW12Q6X9E4 464 aa12.28□□□□□ -0.44
SSBP1-201ENST00000265304 DTX2Q86UW9 622 aa12.28□□□□□ -0.44
SSBP1-201ENST00000265304 NAA40Q86UY6 237 aa12.28□□□□□ -0.44
SSBP1-201ENST00000265304 ZNF540Q8NDQ6 660 aa12.28□□□□□ -0.44
SSBP1-201ENST00000265304 KBTBD8Q8NFY9 601 aa12.28□□□□□ -0.44
SSBP1-201ENST00000265304 OR52N1Q8NH53 320 aa12.28□□□□□ -0.44
SSBP1-201ENST00000265304 RPS4Y2Q8TD47 263 aa12.28□□□□□ -0.44
SSBP1-201ENST00000265304 MYDGFQ969H8 173 aa12.28□□□□□ -0.44
SSBP1-201ENST00000265304 MRPL48Q96GC5 212 aaKnown RBP12.28□□□□□ -0.44
SSBP1-201ENST00000265304 DHRS9Q9BPW9 319 aa12.28□□□□□ -0.44
SSBP1-201ENST00000265304 KCNS3Q9BQ31 491 aa12.28□□□□□ -0.44
SSBP1-201ENST00000265304 CA10Q9NS85 328 aa12.28□□□□□ -0.44
SSBP1-201ENST00000265304 BLOC1S6Q9UL45 172 aa12.28□□□□□ -0.44
SSBP1-201ENST00000265304 LRCH1Q9Y2L9 728 aa12.28□□□□□ -0.44
SSBP1-201ENST00000265304 STARD10Q9Y365 291 aa12.28□□□□□ -0.44
SSBP1-201ENST00000265304 A0A0U1RQV5 110 aa12.27□□□□□ -0.45
SSBP1-201ENST00000265304 A0A1B0GWJ7 208 aa12.27□□□□□ -0.45
SSBP1-201ENST00000265304 F5H5K5 113 aa12.27□□□□□ -0.45
SSBP1-201ENST00000265304 PNPP00491 289 aa12.27□□□□□ -0.45
SSBP1-201ENST00000265304 KRT8P05787 483 aa12.27□□□□□ -0.45
SSBP1-201ENST00000265304 HTR1AP08908 422 aa12.27□□□□□ -0.45
SSBP1-201ENST00000265304 APOBEC3AP31941 199 aaPredicted RBP12.27□□□□□ -0.45
SSBP1-201ENST00000265304 TGM4P49221 684 aa12.27□□□□□ -0.45
SSBP1-201ENST00000265304 ETV1P50549 477 aa12.27□□□□□ -0.45
SSBP1-201ENST00000265304 GALK2Q01415 458 aa12.27□□□□□ -0.45
SSBP1-201ENST00000265304 TAF13Q15543 124 aa12.27□□□□□ -0.45
SSBP1-201ENST00000265304 ADIPOQQ15848 244 aa12.27□□□□□ -0.45
SSBP1-201ENST00000265304 MST1LQ2TV78 715 aa12.27□□□□□ -0.45
SSBP1-201ENST00000265304 RFPL4BQ6ZWI9 263 aa12.27□□□□□ -0.45
SSBP1-201ENST00000265304 AHSA2Q719I0 299 aa12.27□□□□□ -0.45
SSBP1-201ENST00000265304 PRSS48Q7RTY5 328 aa12.27□□□□□ -0.45
SSBP1-201ENST00000265304 LHFPL3Q86UP9 236 aa12.27□□□□□ -0.45
SSBP1-201ENST00000265304 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.27□□□□□ -0.45
SSBP1-201ENST00000265304 NANOGP1Q8N7R0 232 aa12.27□□□□□ -0.45
SSBP1-201ENST00000265304 OR5L1Q8NGL2 311 aa12.27□□□□□ -0.45
SSBP1-201ENST00000265304 RORBQ92753 470 aa12.27□□□□□ -0.45
SSBP1-201ENST00000265304 PELI1Q96FA3 418 aa12.27□□□□□ -0.45
SSBP1-201ENST00000265304 ALG8Q9BVK2 526 aa12.27□□□□□ -0.45
SSBP1-201ENST00000265304 REPIN1Q9BWE0 567 aaKnown RBP12.27□□□□□ -0.45
SSBP1-201ENST00000265304 CLEC4MQ9H2X3 399 aaPredicted RBP12.27□□□□□ -0.45
SSBP1-201ENST00000265304 RGCCQ9H4X1 137 aa12.27□□□□□ -0.45
SSBP1-201ENST00000265304 G6PC2Q9NQR9 355 aa12.27□□□□□ -0.45
SSBP1-201ENST00000265304 CISD1Q9NZ45 108 aaKnown RBP12.27□□□□□ -0.45
SSBP1-201ENST00000265304 ZNF319Q9P2F9 582 aa12.27□□□□□ -0.45
SSBP1-201ENST00000265304 NUFIP1Q9UHK0 495 aaKnown RBP12.27□□□□□ -0.45
SSBP1-201ENST00000265304 ZNF391Q9UJN7 358 aa12.27□□□□□ -0.45
SSBP1-201ENST00000265304 GRIP1Q9Y3R0 1128 aa12.27□□□□□ -0.45
SSBP1-201ENST00000265304 R4GMQ9 66 aa12.27□□□□□ -0.45
SSBP1-201ENST00000265304 MAGEB4O15481 346 aaPredicted RBP12.26□□□□□ -0.45
SSBP1-201ENST00000265304 IGHV3-13P01766 116 aa12.26□□□□□ -0.45
SSBP1-201ENST00000265304 RAC2P15153 192 aa12.26□□□□□ -0.45
SSBP1-201ENST00000265304 ANOS1P23352 680 aa12.26□□□□□ -0.45
SSBP1-201ENST00000265304 HSD11B1P28845 292 aa12.26□□□□□ -0.45
SSBP1-201ENST00000265304 TTKP33981 857 aa12.26□□□□□ -0.45
SSBP1-201ENST00000265304 THBS4P35443 961 aa12.26□□□□□ -0.45
SSBP1-201ENST00000265304 CCR9P51686 369 aa12.26□□□□□ -0.45
SSBP1-201ENST00000265304 PRKXP51817 358 aa12.26□□□□□ -0.45
SSBP1-201ENST00000265304 OR12D2P58182 307 aa12.26□□□□□ -0.45
SSBP1-201ENST00000265304 ZNF121P58317 390 aaPredicted RBP12.26□□□□□ -0.45
SSBP1-201ENST00000265304 PPP1CBP62140 327 aa12.26□□□□□ -0.45
SSBP1-201ENST00000265304 ACSM1Q08AH1 577 aa12.26□□□□□ -0.45
SSBP1-201ENST00000265304 SNTB2Q13425 540 aaKnown RBP12.26□□□□□ -0.45
SSBP1-201ENST00000265304 SWI5Q1ZZU3 235 aa12.26□□□□□ -0.45
SSBP1-201ENST00000265304 ZNF829Q3KNS6 432 aaPredicted RBP12.26□□□□□ -0.45
SSBP1-201ENST00000265304 KCTD21Q4G0X4 260 aa12.26□□□□□ -0.45
SSBP1-201ENST00000265304 ZNF787Q6DD87 383 aa12.26□□□□□ -0.45
SSBP1-201ENST00000265304 ELMOD2Q8IZ81 293 aa12.26□□□□□ -0.45
SSBP1-201ENST00000265304 ZNF786Q8N393 782 aa12.26□□□□□ -0.45
SSBP1-201ENST00000265304 PLPP7Q8NBV4 271 aa12.26□□□□□ -0.45
SSBP1-201ENST00000265304 SNX33Q8WV41 574 aa12.26□□□□□ -0.45
SSBP1-201ENST00000265304 SGCDQ92629 289 aa12.26□□□□□ -0.45
SSBP1-201ENST00000265304 AKAP1Q92667 903 aaKnown RBP eCLIP12.26□□□□□ -0.45
SSBP1-201ENST00000265304 NEUROG1Q92886 237 aa12.26□□□□□ -0.45
SSBP1-201ENST00000265304 MRPL24Q96A35 216 aaKnown RBP12.26□□□□□ -0.45
SSBP1-201ENST00000265304 HAVCR1Q96D42 359 aa12.26□□□□□ -0.45
SSBP1-201ENST00000265304 TBX5Q99593 518 aa12.26□□□□□ -0.45
SSBP1-201ENST00000265304 MOB1AQ9H8S9 216 aa12.26□□□□□ -0.45
SSBP1-201ENST00000265304 CLEC2DQ9UHP7 191 aa12.26□□□□□ -0.45
SSBP1-201ENST00000265304 LSM2Q9Y333 95 aaKnown RBP12.26□□□□□ -0.45
SSBP1-201ENST00000265304 TMEM269A0A1B0GVZ9 245 aa12.25□□□□□ -0.45
SSBP1-201ENST00000265304 LOC390937A0A1W2PQ73 354 aa12.25□□□□□ -0.45
SSBP1-201ENST00000265304 VSTM5A8MXK1 200 aa12.25□□□□□ -0.45
SSBP1-201ENST00000265304 PTGES3LE9PB15 166 aa12.25□□□□□ -0.45
SSBP1-201ENST00000265304 GPRIN2O60269 458 aa12.25□□□□□ -0.45
SSBP1-201ENST00000265304 LCATP04180 440 aa12.25□□□□□ -0.45
SSBP1-201ENST00000265304 PRF1P14222 555 aa12.25□□□□□ -0.45
SSBP1-201ENST00000265304 MYL12AP19105 171 aa12.25□□□□□ -0.45
SSBP1-201ENST00000265304 KITLGP21583 273 aa12.25□□□□□ -0.45
SSBP1-201ENST00000265304 CCNOP22674 350 aa12.25□□□□□ -0.45
SSBP1-201ENST00000265304 CX3CR1P49238 355 aa12.25□□□□□ -0.45
SSBP1-201ENST00000265304 SNAI3Q3KNW1 292 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms