RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 BHLHE23Q8NDY6 225 aa11.77□□□□□ -0.53
NUP54-201ENST00000264883 ZNF563Q8TA94 476 aa11.77□□□□□ -0.53
NUP54-201ENST00000264883 MR1Q95460 341 aa11.77□□□□□ -0.53
NUP54-201ENST00000264883 GALNT14Q96FL9 552 aa11.77□□□□□ -0.53
NUP54-201ENST00000264883 GPX7Q96SL4 187 aaPredicted RBP11.77□□□□□ -0.53
NUP54-201ENST00000264883 GPR61Q9BZJ8 451 aa11.77□□□□□ -0.53
NUP54-201ENST00000264883 KLHDC2Q9Y2U9 406 aa11.77□□□□□ -0.53
NUP54-201ENST00000264883 HDGFL3Q9Y3E1 203 aa11.77□□□□□ -0.53
NUP54-201ENST00000264883 COL4A2P08572 1712 aa11.77□□□□□ -0.53
NUP54-201ENST00000264883 TICRRQ7Z2Z1 1910 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 NPIPA5A0A0B4J1W7 369 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 ELOA3DA6NLF2 546 aaPredicted RBP11.76□□□□□ -0.53
NUP54-201ENST00000264883 OR4C45A6NMZ5 311 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 ZNF587BE7ETH6 402 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 NPIPA7E9PJI5 369 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 TAAR5O14804 337 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 PPP1R2P9O14990 202 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 CSTBP04080 98 aaKnown RBP11.76□□□□□ -0.53
NUP54-201ENST00000264883 CEACAM5P06731 702 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 HCKP08631 526 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 NPIPA8P0DM63 369 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 PAX1P15863 534 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 DRD3P35462 400 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 SNCAP37840 140 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 SLC25A1P53007 311 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 DLX2Q07687 328 aaPredicted RBP11.76□□□□□ -0.53
NUP54-201ENST00000264883 KIR2DS3Q14952 304 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 ZNF674Q2M3X9 581 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 ELOA3BQ3SY89 546 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 KHDC3LQ587J8 217 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 ELOA3Q8NG57 546 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 OR6X1Q8NH79 312 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 LYPD6BQ8NI32 183 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 RSC1A1Q92681 617 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 SLC41A2Q96JW4 573 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 PLA2G2FQ9BZM2 168 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 EIF5A2Q9GZV4 153 aaKnown RBP11.76□□□□□ -0.53
NUP54-201ENST00000264883 FAM86C1Q9NVL1 165 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 DNAJB12Q9NXW2 375 aaKnown RBP11.76□□□□□ -0.53
NUP54-201ENST00000264883 PLA2G2EQ9NZK7 142 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 THAP10Q9P2Z0 257 aaPredicted RBP11.76□□□□□ -0.53
NUP54-201ENST00000264883 COLQQ9Y215 455 aaPredicted RBP11.76□□□□□ -0.53
NUP54-201ENST00000264883 KCNIP3Q9Y2W7 256 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 AMDHD2Q9Y303 409 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 MKRN2OSH3BPM6 223 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 RPL36A-HNRNPH2H7BZ11 118 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 ADAM10O14672 748 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 TNFSF14O43557 240 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 ADAP1O75689 374 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 GPR75O95800 540 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 ADH1BP00325 375 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 GABRA3P34903 492 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 CEACAM6P40199 344 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 ACAA2P42765 397 aaKnown RBP11.76□□□□□ -0.53
NUP54-201ENST00000264883 PCP4P48539 62 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 NHLH2Q02577 135 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 PRICKLE4Q2TBC4 344 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 C14orf28Q4W4Y0 310 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 ANKRD39Q53RE8 183 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 ZNF529Q6P280 563 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 SLC16A9Q7RTY1 509 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 HIST3H2BBQ8N257 126 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 ZNF615Q8N8J6 731 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 TSEN15Q8WW01 171 aaKnown RBP11.76□□□□□ -0.53
NUP54-201ENST00000264883 MCHR2Q969V1 340 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 BCO1Q9HAY6 547 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 FBXO34Q9NWN3 711 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 PIAS3Q9Y6X2 628 aa11.76□□□□□ -0.53
NUP54-201ENST00000264883 BRWD1Q9NSI6 2320 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 ELOA3CA0A087WX78 387 aaPredicted RBP11.75□□□□□ -0.53
NUP54-201ENST00000264883 STMND1H3BQB6 276 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 DOK2O60496 412 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 GPANK1O95872 356 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 NGFRP08138 427 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 SOD3P08294 240 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 MPZP25189 248 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 CRABP1P29762 137 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 PLAURQ03405 335 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 PMPCAQ10713 525 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 TOMM34Q15785 309 aaPredicted RBP11.75□□□□□ -0.53
NUP54-201ENST00000264883 DEFB134Q4QY38 66 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 GFI1BQ5VTD9 330 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 OR4N5Q8IXE1 308 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 FAM174AQ8TBP5 190 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 ALG12Q9BV10 488 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 PTGES2Q9H7Z7 377 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 IKZF2Q9UKS7 526 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 MMP24Q9Y5R2 645 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 FITM1A5D6W6 292 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 OR5H15A6NDH6 313 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 TMEM235A6NFC5 223 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 OR5H1A6NKK0 313 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 TMEM212A6NML5 194 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 SNRPCP09234 159 aaKnown RBP11.75□□□□□ -0.53
NUP54-201ENST00000264883 TBC1D3HP0C7X1 549 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 G0S2P27469 103 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 RUNX3Q13761 415 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 ZNHIT3Q15649 155 aaPredicted RBP11.75□□□□□ -0.53
NUP54-201ENST00000264883 MIDNQ504T8 468 aa11.75□□□□□ -0.53
NUP54-201ENST00000264883 LINC01590Q5TEZ4 76 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms