RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 FAM221BA6H8Z2 402 aa11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 FAM157AC9JC47 383 aa11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 TSPAN15O95858 294 aa11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 RAB1AP62820 205 aa11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 IGLV3-21P80748 117 aaPredicted RBP11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 RHEBQ15382 184 aa11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 NNATQ16517 81 aa11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 DEGS2Q6QHC5 323 aa11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 LYPD6BQ8NI32 183 aa11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 CNTD2Q9H8S5 307 aa11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 FN3KRPQ9HA64 309 aa11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 FAM212BQ9NTI7 297 aaPredicted RBP11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 MRPL22Q9NWU5 206 aaKnown RBP11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 LHX6Q9UPM6 363 aa11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 EMC9Q9Y3B6 208 aa11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 FIGNL2A6NMB9 653 aa11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 ZNF729A6NN14 1252 aaPredicted RBP11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 APBB3O95704 486 aa11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 BGLAPP02818 100 aa11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 FAM3AP98173 230 aa11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 FUT7Q11130 342 aa11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 SGCBQ16585 318 aa11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 KRBOX4Q5JUW0 171 aa11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 RPL7L1Q6DKI1 246 aaKnown RBP11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 HIST2H3AQ71DI3 136 aa11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 OOSP2Q86WS3 158 aa11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 POC1AQ8NBT0 407 aa11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 PAPOLGQ9BWT3 736 aaKnown RBP11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 TXNIPQ9H3M7 391 aa11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 PRTFDC1Q9NRG1 225 aa11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 ANAPC10Q9UM13 185 aa11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 SLC5A6Q9Y289 635 aa11.07□□□□□ -0.64
CHMP2B-201ENST00000263780 PDE4DIPQ5VU43 2346 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 WIPF3A6NGB9 483 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 C11orf98E9PRG8 122 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 HRKO00198 91 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 AGPAT2O15120 278 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 SRSF10O75494 262 aaKnown RBP11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 TIMP1P01033 207 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 SNRNP70P08621 437 aaKnown RBP11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 POU2F2P09086 479 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 ZNF823P16415 610 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 GNB3P16520 340 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 WASP42768 502 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 HGFACQ04756 655 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 RAB32Q13637 225 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 COL19A1Q14993 1142 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 SLC9A3R2Q15599 337 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 ACKR1Q16570 336 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 AWAT1Q58HT5 328 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 NSUN5P2Q63ZY6 315 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 Q6ZRG5 221 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 TMPPEQ6ZT21 453 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 MED25Q71SY5 747 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 Q7L0L9 218 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 OR9A4Q8NGU2 314 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 ZNF519Q8TB69 540 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 OR1E3Q8WZA6 343 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 CMBLQ96DG6 245 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 OPA3Q9H6K4 179 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 LMAN1LQ9HAT1 526 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 STARD10Q9Y365 291 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 RHBDD3Q9Y3P4 386 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 EML5Q05BV3 1969 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 RHPN2P1A8MT19 583 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 M0R036 132 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 PLRG1O43660 514 aaKnown RBP11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 CLN5O75503 358 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 ADAP1O75689 374 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 IL33O95760 270 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 PVRP15151 417 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 GDI1P31150 447 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 QRFPP83859 136 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 EBPQ15125 230 aaKnown RBP11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 CD226Q15762 336 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 TOMM34Q15785 309 aaPredicted RBP11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 TMEM268Q5VZI3 342 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 DNM1P34Q6PK57 102 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 RD3Q7Z3Z2 195 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 TMPRSS9Q7Z410 1059 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 C1QL4Q86Z23 238 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 SHISA5Q8N114 240 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 OR9K2Q8NGE7 335 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 OR1J1Q8NGS3 322 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 SECTM1Q8WVN6 248 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 C5orf66Q9H5L9 145 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 G6PC2Q9NQR9 355 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 TBX21Q9UL17 535 aa11.06□□□□□ -0.64
CHMP2B-201ENST00000263780 NOTCH4Q99466 2003 aa11.05□□□□□ -0.64
CHMP2B-201ENST00000263780 TMEM269A0A1B0GVZ9 245 aa11.05□□□□□ -0.64
CHMP2B-201ENST00000263780 SLC31A1O15431 190 aa11.05□□□□□ -0.64
CHMP2B-201ENST00000263780 OR8U8P0C7N1 319 aa11.05□□□□□ -0.64
CHMP2B-201ENST00000263780 VSIG8P0DPA2 414 aa11.05□□□□□ -0.64
CHMP2B-201ENST00000263780 ACKR3P25106 362 aa11.05□□□□□ -0.64
CHMP2B-201ENST00000263780 GNALP38405 381 aa11.05□□□□□ -0.64
CHMP2B-201ENST00000263780 S100A10P60903 97 aa11.05□□□□□ -0.64
CHMP2B-201ENST00000263780 UNC119Q13432 240 aa11.05□□□□□ -0.64
CHMP2B-201ENST00000263780 SLC22A6Q4U2R8 563 aa11.05□□□□□ -0.64
CHMP2B-201ENST00000263780 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.05□□□□□ -0.64
CHMP2B-201ENST00000263780 OR5D14Q8NGL3 314 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms