RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 INSM1Q01101 510 aaPredicted RBP13□□□□□ -0.33
CUX2-201ENST00000261726 Q6ZSR9 355 aa13□□□□□ -0.33
CUX2-201ENST00000261726 LHX4Q969G2 390 aa13□□□□□ -0.33
CUX2-201ENST00000261726 ACY3Q96HD9 319 aa13□□□□□ -0.33
CUX2-201ENST00000261726 RAB18Q9NP72 206 aa13□□□□□ -0.33
CUX2-201ENST00000261726 DNAJC25-GNG10A0A024R161 153 aa13□□□□□ -0.33
CUX2-201ENST00000261726 TMEM202A6NGA9 273 aa13□□□□□ -0.33
CUX2-201ENST00000261726 M0R135 149 aa13□□□□□ -0.33
CUX2-201ENST00000261726 ZNF354AO60765 605 aaPredicted RBP13□□□□□ -0.33
CUX2-201ENST00000261726 MOB3BQ86TA1 216 aa13□□□□□ -0.33
CUX2-201ENST00000261726 VN1R2Q8NFZ6 395 aa13□□□□□ -0.33
CUX2-201ENST00000261726 ZNF799Q96GE5 643 aa13□□□□□ -0.33
CUX2-201ENST00000261726 ONECUT1Q9UBC0 465 aa13□□□□□ -0.33
CUX2-201ENST00000261726 ZMAT5Q9UDW3 170 aaKnown RBP13□□□□□ -0.33
CUX2-201ENST00000261726 BRWD3Q6RI45 1802 aa13□□□□□ -0.33
CUX2-201ENST00000261726 DGCR2P98153 550 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 ELAVL1Q15717 326 aaKnown RBP12.99□□□□□ -0.33
CUX2-201ENST00000261726 KLHDC8BQ8IXV7 354 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 C6orf106Q9H6K1 298 aaPredicted RBP12.99□□□□□ -0.33
CUX2-201ENST00000261726 LRP3O75074 770 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 ICOSLGO75144 302 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 ENDOGQ14249 297 aaKnown RBP12.99□□□□□ -0.33
CUX2-201ENST00000261726 FAM71E1Q6IPT2 247 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 ZNF573Q86YE8 665 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 NUDT8Q8WV74 236 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 TMEM38AQ9H6F2 299 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 DLL4Q9NR61 685 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 RFPL4AA6NLU0 287 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 RFPL4AL1F8VTS6 287 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 AQP8O94778 261 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 PARM1Q6UWI2 310 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 MFSD4AQ8N468 514 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 NANOGP1Q8N7R0 232 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 OR13C5Q8NGS8 318 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 OR2M5A3KFT3 312 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 J3QR89 54 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 HAAOP46952 286 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 ARHGEF39Q8N4T4 335 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 TMEM102Q8N9M5 508 aaPredicted RBP12.99□□□□□ -0.33
CUX2-201ENST00000261726 OR52N5Q8NH56 324 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 ZNF596Q8TC21 504 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 ERGIC1Q969X5 290 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 SIAEQ9HAT2 523 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 LYRM4Q9HD34 91 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 THAP10Q9P2Z0 257 aaPredicted RBP12.99□□□□□ -0.33
CUX2-201ENST00000261726 ZNF320A2RRD8 509 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 PMS2P1A4D2B8 440 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 OR2A25A4D2G3 310 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 JTBO76095 146 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 TMPRSS11FQ6ZWK6 438 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 RBM14Q96PK6 669 aaKnown RBP12.99□□□□□ -0.33
CUX2-201ENST00000261726 IER2Q9BTL4 223 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 DOCK2Q92608 1830 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 SOCS7O14512 581 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 SPATA46Q5T0L3 261 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 GNPNAT1Q96EK6 184 aaPredicted RBP12.99□□□□□ -0.33
CUX2-201ENST00000261726 SLC39A13Q96H72 371 aa12.99□□□□□ -0.33
CUX2-201ENST00000261726 CRYBA1P05813 215 aa12.98□□□□□ -0.33
CUX2-201ENST00000261726 ARNTP27540 789 aa12.98□□□□□ -0.33
CUX2-201ENST00000261726 ANKLE1Q8NAG6 615 aa12.98□□□□□ -0.33
CUX2-201ENST00000261726 ROBO4Q8WZ75 1007 aa12.98□□□□□ -0.33
CUX2-201ENST00000261726 SLC25A46Q96AG3 418 aa12.98□□□□□ -0.33
CUX2-201ENST00000261726 TEX37Q96LM6 180 aa12.98□□□□□ -0.33
CUX2-201ENST00000261726 HS3ST3A1Q9Y663 406 aa12.98□□□□□ -0.33
CUX2-201ENST00000261726 USF1P22415 310 aaPredicted RBP12.98□□□□□ -0.33
CUX2-201ENST00000261726 PATE1Q8WXA2 126 aa12.98□□□□□ -0.33
CUX2-201ENST00000261726 NXPE3Q969Y0 559 aa12.98□□□□□ -0.33
CUX2-201ENST00000261726 ARHGDIGQ99819 225 aa12.98□□□□□ -0.33
CUX2-201ENST00000261726 SMIM7Q9BQ49 75 aa12.98□□□□□ -0.33
CUX2-201ENST00000261726 FBXO34Q9NWN3 711 aa12.98□□□□□ -0.33
CUX2-201ENST00000261726 YTHDF2Q9Y5A9 579 aaKnown RBP12.98□□□□□ -0.33
CUX2-201ENST00000261726 A0A0B4J203 849 aa12.98□□□□□ -0.33
CUX2-201ENST00000261726 GPR31O00270 319 aa12.98□□□□□ -0.33
CUX2-201ENST00000261726 CRXO43186 299 aaPredicted RBP12.98□□□□□ -0.33
CUX2-201ENST00000261726 SLCO2B1O94956 709 aa12.98□□□□□ -0.33
CUX2-201ENST00000261726 PTBP3O95758 552 aaKnown RBP12.98□□□□□ -0.33
CUX2-201ENST00000261726 TMEM52BQ4KMG9 183 aa12.98□□□□□ -0.33
CUX2-201ENST00000261726 PHYHIPQ92561 330 aa12.98□□□□□ -0.33
CUX2-201ENST00000261726 ZNF629Q9UEG4 869 aaPredicted RBP12.98□□□□□ -0.33
CUX2-201ENST00000261726 TBC1D29Q9UFV1 150 aa12.98□□□□□ -0.33
CUX2-201ENST00000261726 FBXO4Q9UKT5 387 aa12.98□□□□□ -0.33
CUX2-201ENST00000261726 SPP1P10451 314 aa12.98□□□□□ -0.33
CUX2-201ENST00000261726 RPL12P30050 165 aaKnown RBP12.98□□□□□ -0.33
CUX2-201ENST00000261726 HRH1P35367 487 aa12.98□□□□□ -0.33
CUX2-201ENST00000261726 LRRC26Q2I0M4 334 aa12.98□□□□□ -0.33
CUX2-201ENST00000261726 THEM4Q5T1C6 240 aa12.98□□□□□ -0.33
CUX2-201ENST00000261726 DHRS7BQ6IAN0 325 aaPredicted RBP12.98□□□□□ -0.33
CUX2-201ENST00000261726 ZDHHC23Q8IYP9 409 aa12.98□□□□□ -0.33
CUX2-201ENST00000261726 CMTM3Q96MX0 182 aa12.98□□□□□ -0.33
CUX2-201ENST00000261726 TAAR6Q96RI8 345 aa12.98□□□□□ -0.33
CUX2-201ENST00000261726 SYT14P1Q58G82 188 aa12.98□□□□□ -0.33
CUX2-201ENST00000261726 NUDCD2Q8WVJ2 157 aa12.98□□□□□ -0.33
CUX2-201ENST00000261726 A0A0A6YYJ9 748 aa12.97□□□□□ -0.33
CUX2-201ENST00000261726 TAAR5O14804 337 aa12.97□□□□□ -0.33
CUX2-201ENST00000261726 RBP4P02753 201 aa12.97□□□□□ -0.33
CUX2-201ENST00000261726 ZNF17P17021 662 aa12.97□□□□□ -0.33
CUX2-201ENST00000261726 CDC34P49427 236 aaPredicted RBP12.97□□□□□ -0.33
CUX2-201ENST00000261726 SNRPGP62308 76 aaKnown RBP12.97□□□□□ -0.33
CUX2-201ENST00000261726 SCPEP1Q9HB40 452 aa12.97□□□□□ -0.33
CUX2-201ENST00000261726 FLVCR2Q9UPI3 526 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms