RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 SDHAF3Q9NRP4 125 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 APC2O95996 2303 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 SNRPGP15A8MWD9 76 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 TRIM77I1YAP6 450 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 BET1O15155 118 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 MGMTP16455 207 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 CD1CP29017 333 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 ACAA2P42765 397 aaKnown RBP9.09□□□□□ -0.95
PALB2-201ENST00000261584 ZNF41P51814 821 aaPredicted RBP9.09□□□□□ -0.95
PALB2-201ENST00000261584 MGAT2Q10469 447 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 RAB32Q13637 225 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 TMEM176BQ3YBM2 270 aaPredicted RBP9.09□□□□□ -0.95
PALB2-201ENST00000261584 RAET1LQ5VY80 246 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 LANCL3Q6ZV70 420 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 FAM71CQ8NEG0 241 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 OR5D14Q8NGL3 314 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 GPHA2Q96T91 129 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 SLC5A7Q9GZV3 580 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 RHOFQ9HBH0 211 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 LANCL2Q9NS86 450 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 PLEK2Q9NYT0 353 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 PPP4R1LQ9P1A2 415 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 SUSD2Q9UGT4 822 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 TBX21Q9UL17 535 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 SLC5A6Q9Y289 635 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 RCL1Q9Y2P8 373 aaKnown RBP9.09□□□□□ -0.95
PALB2-201ENST00000261584 MRPS18BQ9Y676 258 aaKnown RBP9.09□□□□□ -0.95
PALB2-201ENST00000261584 VWA8A3KMH1 1905 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 CHD7Q9P2D1 2997 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 LOC101059948A0A1B0GTJ6 334 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 MFSD2BA6NFX1 497 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 OGG1O15527 345 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 MDKP21741 143 aaPredicted RBP9.09□□□□□ -0.95
PALB2-201ENST00000261584 MLC1Q15049 377 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 TAF9Q16594 264 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 NPSR1Q6W5P4 371 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 SULF2Q8IWU5 870 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 LIN37Q96GY3 246 aaPredicted RBP9.09□□□□□ -0.95
PALB2-201ENST00000261584 ARL5BQ96KC2 179 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 C10orf90Q96M02 699 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 URM1Q9BTM9 101 aaKnown RBP9.09□□□□□ -0.95
PALB2-201ENST00000261584 PRELID3BQ9Y3B1 194 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 SHANK1Q9Y566 2161 aa9.09□□□□□ -0.95
PALB2-201ENST00000261584 OR4C45A6NMZ5 311 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 PRSS44E7EML9 344 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 SOX15O60248 233 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 CSNK1EP49674 416 aaKnown RBP9.08□□□□□ -0.96
PALB2-201ENST00000261584 RPS16P62249 146 aaKnown RBP9.08□□□□□ -0.96
PALB2-201ENST00000261584 TSC22D1Q15714 1073 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 PHF19Q5T6S3 580 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 C1orf140Q5VVS0 124 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 BEND4Q6ZU67 534 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 ANKRD33Q7Z3H0 272 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 MITD1Q8WV92 249 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 SEH1LQ96EE3 360 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 LMF2Q9BU23 707 aaKnown RBP9.08□□□□□ -0.96
PALB2-201ENST00000261584 PITHD1Q9GZP4 211 aaPredicted RBP9.08□□□□□ -0.96
PALB2-201ENST00000261584 WDR13Q9H1Z4 485 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 PIGMQ9H3S5 423 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 CNTD2Q9H8S5 307 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 A6NLC8 198 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 ZNF705GA8MUZ8 300 aaPredicted RBP9.08□□□□□ -0.96
PALB2-201ENST00000261584 OR2T1O43869 369 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 PTP4A3O75365 173 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 MTRF1O75570 445 aaKnown RBP9.08□□□□□ -0.96
PALB2-201ENST00000261584 GUSBP08236 651 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 ZNF43P17038 809 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 FBLP22087 321 aaKnown RBP9.08□□□□□ -0.96
PALB2-201ENST00000261584 RPS11P62280 158 aaKnown RBP eCLIP9.08□□□□□ -0.96
PALB2-201ENST00000261584 ZNF425Q6IV72 752 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 ANKRD16Q6P6B7 361 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 RBMS3Q6XE24 437 aaKnown RBP9.08□□□□□ -0.96
PALB2-201ENST00000261584 BAHD1Q8TBE0 780 aaPredicted RBP9.08□□□□□ -0.96
PALB2-201ENST00000261584 SLC2A12Q8TD20 617 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 IL1F10Q8WWZ1 152 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 HGDQ93099 445 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 SGCZQ96LD1 299 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 SOSTQ9BQB4 213 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 ZNF160Q9HCG1 818 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 VSTM2BA6NLU5 285 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 SULT1B1O43704 296 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 CXCL10P02778 98 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 LCATP04180 440 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 SFTA3P0C7M3 94 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 FABP9Q0Z7S8 132 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 TMEM182Q6ZP80 229 aaPredicted RBP9.08□□□□□ -0.96
PALB2-201ENST00000261584 BHLHE23Q8NDY6 225 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 TSTD1Q8NFU3 115 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 UBL7Q96S82 380 aaPredicted RBP9.08□□□□□ -0.96
PALB2-201ENST00000261584 DMRTA2Q96SC8 542 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 STACQ99469 402 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 SPSB2Q99619 263 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 ETV7Q9Y603 341 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 MPTX1A8MV57 137 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 SLC17A2O00624 439 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 SOCS1O15524 211 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 BCL2L11O43521 198 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 HERV-K104P61576 105 aa9.08□□□□□ -0.96
PALB2-201ENST00000261584 FLI1Q01543 452 aaPredicted RBP9.08□□□□□ -0.96
PALB2-201ENST00000261584 SRYQ05066 204 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms