RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 IGFBP5P24593 272 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 CXCR1P25024 350 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 GK2Q14410 553 aaPredicted RBP4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 PON3Q15166 354 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 CLPPQ16740 277 aaPredicted RBP4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 ELOA3BQ3SY89 546 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 IL20RBQ6UXL0 311 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 PRSS48Q7RTY5 328 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 LHFPL3Q86UP9 236 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 DOLPP1Q86YN1 238 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 ELOA3Q8NG57 546 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 OR4M2Q8NGB6 313 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 HEXA-AS1Q9H8Q6 139 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 MRPL39Q9NYK5 338 aaKnown RBP4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 PISDQ9UG56 409 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 POFUT2Q9Y2G5 429 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 OR14I1A6ND48 311 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 KHDRBS3O75525 346 aaKnown RBP4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 ARL6IP5O75915 188 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 STOMP27105 288 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 HTR1FP30939 366 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 UGT2B10P36537 528 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 RPP30P78346 268 aaKnown RBP4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 SLC13A2Q13183 592 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 TRA2AQ13595 282 aaKnown RBP eCLIP4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 TBR1Q16650 682 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 RBM48Q5RL73 367 aaKnown RBP4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 LRRN1Q6UXK5 716 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 Q71RC1 249 aaPredicted RBP4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 WDR13Q9H1Z4 485 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 ANKRD19PQ9H560 264 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 SLC24A3Q9HC58 644 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 TMEM9BQ9NQ34 198 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 EXOSC1Q9Y3B2 195 aaKnown RBP4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 MSRB2Q9Y3D2 182 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 MRPS18CQ9Y3D5 142 aaKnown RBP4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 OR10H3O60404 316 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 GRPRP30550 384 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 CEACAM8P31997 349 aaPredicted RBP4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 NUBP1P53384 320 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 NKX6-1P78426 367 aaPredicted RBP4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 BPIFB6Q8NFQ5 453 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 ROBO4Q8WZ75 1007 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 POM121L2Q96KW2 1035 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 BCL7BQ9BQE9 202 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 COPS4Q9BT78 406 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 CST11Q9H112 138 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 ENY2Q9NPA8 101 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 TIMMDC1Q9NPL8 285 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 A0A1W2PPH5 198 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 A6NIZ1 184 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 CASKO14936 926 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 PLAUP00749 431 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 ANXA3P12429 323 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 CCL2P13500 99 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 IRF2P14316 349 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 RAP1BP61224 184 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 ERVK11-1P61568 191 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 RAP1AP62834 184 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 ALG10BQ5I7T1 473 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 TMEM53Q6P2H8 277 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 TFAP2EQ6VUC0 442 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 C20orf196Q8IYI0 205 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 ANKK1Q8NFD2 765 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 OR11H4Q8NGC9 324 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 CCNL2Q96S94 520 aaPredicted RBP4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 SCRT1Q9BWW7 348 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 SAMHD1Q9Y3Z3 626 aaKnown RBP4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 NACAE9PAV3 2078 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 A0A0G2JNJ9 132 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 NPIPA5E9PKD4 350 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 RPL36A-HNRNPH2H7BZ11 118 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 J3QRK9 145 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 WRBO00258 174 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 GADD45GO95257 159 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 FADS2O95864 444 aaKnown RBP4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 TNFSF4P23510 183 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 POU1F1P28069 291 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 KCNJ3P48549 501 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 GABREP78334 506 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 MALLQ13021 153 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 SSPNQ14714 243 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 ZNF57Q68EA5 555 aaPredicted RBP4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 ASCL4Q6XD76 172 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 YRDCQ86U90 279 aaKnown RBP4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 SLC34A3Q8N130 599 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 KLHL36Q8N4N3 616 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 CLIP3Q96DZ5 547 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 ZNF71Q9NQZ8 489 aaPredicted RBP4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 UBQLN4Q9NRR5 601 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 PNO1Q9NRX1 252 aaKnown RBP4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 EMC3Q9P0I2 261 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 Q9UFV3 132 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 NPIPA1Q9UND3 350 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 TNFRSF11BO00300 401 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 TNFSF11O14788 317 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 TLX2O43763 284 aaPredicted RBP4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 GMDSO60547 372 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 GFRA3O60609 400 aa4.81□□□□□ -1.64
TOPBP1-201ENST00000260810 CPNE3O75131 537 aaKnown RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms