RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 PLA2G12AQ9BZM1 189 aa15.94■□□□□ 0.14
TM6SF1-201ENST00000258909 POLR3KQ9Y2Y1 108 aaPredicted RBP15.94■□□□□ 0.14
TM6SF1-201ENST00000258909 TVP23AA6NH52 213 aa15.93■□□□□ 0.14
TM6SF1-201ENST00000258909 A8MXK9 166 aa15.93■□□□□ 0.14
TM6SF1-201ENST00000258909 IDH3BO43837 385 aa15.93■□□□□ 0.14
TM6SF1-201ENST00000258909 RPS2P15880 293 aaKnown RBP15.93■□□□□ 0.14
TM6SF1-201ENST00000258909 COMPP49747 757 aaPredicted RBP15.93■□□□□ 0.14
TM6SF1-201ENST00000258909 UBA52P62987 128 aaKnown RBP15.93■□□□□ 0.14
TM6SF1-201ENST00000258909 GNGT1P63211 74 aa15.93■□□□□ 0.14
TM6SF1-201ENST00000258909 PPP1R8Q12972 351 aaKnown RBP15.93■□□□□ 0.14
TM6SF1-201ENST00000258909 LYPD4Q6UWN0 246 aa15.93■□□□□ 0.14
TM6SF1-201ENST00000258909 OR51L1Q8NGJ5 315 aa15.93■□□□□ 0.14
TM6SF1-201ENST00000258909 MRI1Q9BV20 369 aa15.93■□□□□ 0.14
TM6SF1-201ENST00000258909 OR5V1Q9UGF6 321 aa15.93■□□□□ 0.14
TM6SF1-201ENST00000258909 NUP50Q9UKX7 468 aa15.93■□□□□ 0.14
TM6SF1-201ENST00000258909 IGHV3OR16-10A0A075B7F0 116 aa15.92■□□□□ 0.14
TM6SF1-201ENST00000258909 ANOS1P23352 680 aa15.92■□□□□ 0.14
TM6SF1-201ENST00000258909 CD80P33681 288 aa15.92■□□□□ 0.14
TM6SF1-201ENST00000258909 HOXA4Q00056 320 aaPredicted RBP15.92■□□□□ 0.14
TM6SF1-201ENST00000258909 ECH1Q13011 328 aa15.92■□□□□ 0.14
TM6SF1-201ENST00000258909 C16orf89Q6UX73 402 aa15.92■□□□□ 0.14
TM6SF1-201ENST00000258909 C19orf18Q8NEA5 215 aa15.92■□□□□ 0.14
TM6SF1-201ENST00000258909 OR10S1Q8NGN2 331 aa15.92■□□□□ 0.14
TM6SF1-201ENST00000258909 TMEM246Q9BRR3 403 aa15.92■□□□□ 0.14
TM6SF1-201ENST00000258909 BTBD10Q9BSF8 475 aa15.92■□□□□ 0.14
TM6SF1-201ENST00000258909 SSBP3Q9BWW4 388 aaPredicted RBP15.92■□□□□ 0.14
TM6SF1-201ENST00000258909 DDX28Q9NUL7 540 aaKnown RBP15.92■□□□□ 0.14
TM6SF1-201ENST00000258909 ARL2BPQ9Y2Y0 163 aa15.92■□□□□ 0.14
TM6SF1-201ENST00000258909 LYVE1Q9Y5Y7 322 aa15.92■□□□□ 0.14
TM6SF1-201ENST00000258909 IFNL4K9M1U5 179 aa15.91■□□□□ 0.14
TM6SF1-201ENST00000258909 TNFRSF11BO00300 401 aa15.91■□□□□ 0.14
TM6SF1-201ENST00000258909 PSKH1P11801 424 aa15.91■□□□□ 0.14
TM6SF1-201ENST00000258909 ZNF823P16415 610 aa15.91■□□□□ 0.14
TM6SF1-201ENST00000258909 ATP6V1B2P21281 511 aa15.91■□□□□ 0.14
TM6SF1-201ENST00000258909 MALLQ13021 153 aa15.91■□□□□ 0.14
TM6SF1-201ENST00000258909 MAB21L1Q13394 359 aa15.91■□□□□ 0.14
TM6SF1-201ENST00000258909 PRAMEF6Q5VXH4 476 aa15.91■□□□□ 0.14
TM6SF1-201ENST00000258909 RBMS3Q6XE24 437 aaKnown RBP15.91■□□□□ 0.14
TM6SF1-201ENST00000258909 PGAP1Q75T13 922 aa15.91■□□□□ 0.14
TM6SF1-201ENST00000258909 KLBQ86Z14 1044 aa15.91■□□□□ 0.14
TM6SF1-201ENST00000258909 PROKR2Q8NFJ6 384 aa15.91■□□□□ 0.14
TM6SF1-201ENST00000258909 OR52L1Q8NGH7 329 aa15.91■□□□□ 0.14
TM6SF1-201ENST00000258909 OR8D4Q8NGM9 314 aa15.91■□□□□ 0.14
TM6SF1-201ENST00000258909 DDOQ99489 341 aa15.91■□□□□ 0.14
TM6SF1-201ENST00000258909 NTN4Q9HB63 628 aa15.91■□□□□ 0.14
TM6SF1-201ENST00000258909 LRCH1Q9Y2L9 728 aa15.91■□□□□ 0.14
TM6SF1-201ENST00000258909 SOX21Q9Y651 276 aaPredicted RBP15.91■□□□□ 0.14
TM6SF1-201ENST00000258909 CDH10Q9Y6N8 788 aa15.91■□□□□ 0.14
TM6SF1-201ENST00000258909 C5orf63A6NC05 138 aa15.91■□□□□ 0.14
TM6SF1-201ENST00000258909 LRRC30A6NM36 301 aa15.91■□□□□ 0.14
TM6SF1-201ENST00000258909 BHLHE40O14503 412 aa15.91■□□□□ 0.14
TM6SF1-201ENST00000258909 GASTP01350 101 aa15.91■□□□□ 0.14
TM6SF1-201ENST00000258909 TPTEP56180 551 aa15.91■□□□□ 0.14
TM6SF1-201ENST00000258909 GNB2P62879 340 aa15.91■□□□□ 0.14
TM6SF1-201ENST00000258909 SNAI3Q3KNW1 292 aa15.91■□□□□ 0.14
TM6SF1-201ENST00000258909 PIGWQ7Z7B1 504 aa15.91■□□□□ 0.14
TM6SF1-201ENST00000258909 OR9Q1Q8NGQ5 310 aa15.91■□□□□ 0.14
TM6SF1-201ENST00000258909 SPRYD4Q8WW59 207 aaPredicted RBP15.91■□□□□ 0.14
TM6SF1-201ENST00000258909 ZNF48Q96MX3 618 aaPredicted RBP15.91■□□□□ 0.14
TM6SF1-201ENST00000258909 UFSP2Q9NUQ7 469 aa15.91■□□□□ 0.14
TM6SF1-201ENST00000258909 A0A1B0GWJ7 208 aa15.9■□□□□ 0.14
TM6SF1-201ENST00000258909 M0R135 149 aa15.9■□□□□ 0.14
TM6SF1-201ENST00000258909 KRT36O76013 467 aa15.9■□□□□ 0.14
TM6SF1-201ENST00000258909 IGHV4-38-2P0DP08 117 aa15.9■□□□□ 0.14
TM6SF1-201ENST00000258909 HMGA2P52926 109 aa15.9■□□□□ 0.14
TM6SF1-201ENST00000258909 PAX2Q02962 417 aa15.9■□□□□ 0.14
TM6SF1-201ENST00000258909 PAX8Q06710 450 aa15.9■□□□□ 0.14
TM6SF1-201ENST00000258909 MPPED2Q15777 294 aa15.9■□□□□ 0.14
TM6SF1-201ENST00000258909 ZNF404Q494X3 552 aa15.9■□□□□ 0.14
TM6SF1-201ENST00000258909 ZNF362Q5T0B9 420 aaPredicted RBP15.9■□□□□ 0.14
TM6SF1-201ENST00000258909 LYPD2Q6UXB3 125 aa15.9■□□□□ 0.14
TM6SF1-201ENST00000258909 MRPL21Q7Z2W9 205 aaKnown RBP15.9■□□□□ 0.14
TM6SF1-201ENST00000258909 OR2AE1Q8NHA4 323 aa15.9■□□□□ 0.14
TM6SF1-201ENST00000258909 ZNF799Q96GE5 643 aa15.9■□□□□ 0.14
TM6SF1-201ENST00000258909 MIOXQ9UGB7 285 aa15.9■□□□□ 0.14
TM6SF1-201ENST00000258909 FAM20BO75063 409 aa15.89■□□□□ 0.13
TM6SF1-201ENST00000258909 GYPBP06028 91 aa15.89■□□□□ 0.13
TM6SF1-201ENST00000258909 CA6P23280 308 aa15.89■□□□□ 0.13
TM6SF1-201ENST00000258909 ZNF92Q03936 586 aa15.89■□□□□ 0.13
TM6SF1-201ENST00000258909 ZNF181Q2M3W8 571 aa15.89■□□□□ 0.13
TM6SF1-201ENST00000258909 AWAT1Q58HT5 328 aa15.89■□□□□ 0.13
TM6SF1-201ENST00000258909 ZNF770Q6IQ21 691 aaPredicted RBP15.89■□□□□ 0.13
TM6SF1-201ENST00000258909 SLC37A3Q8NCC5 494 aa15.89■□□□□ 0.13
TM6SF1-201ENST00000258909 OR4C15Q8NGM1 316 aa15.89■□□□□ 0.13
TM6SF1-201ENST00000258909 OR2T4Q8NH00 348 aa15.89■□□□□ 0.13
TM6SF1-201ENST00000258909 SPTSSAQ969W0 71 aa15.89■□□□□ 0.13
TM6SF1-201ENST00000258909 NEIL1Q96FI4 390 aaPredicted RBP15.89■□□□□ 0.13
TM6SF1-201ENST00000258909 NDE1Q9NXR1 346 aa15.89■□□□□ 0.13
TM6SF1-201ENST00000258909 IL20Q9NYY1 176 aa15.89■□□□□ 0.13
TM6SF1-201ENST00000258909 N6AMT1Q9Y5N5 214 aa15.89■□□□□ 0.13
TM6SF1-201ENST00000258909 MGAM2Q2M2H8 2515 aa15.88■□□□□ 0.13
TM6SF1-201ENST00000258909 DNAJC9-AS1A6NH13 148 aa15.88■□□□□ 0.13
TM6SF1-201ENST00000258909 CD300LBA8K4G0 201 aa15.88■□□□□ 0.13
TM6SF1-201ENST00000258909 DCTN3O75935 186 aa15.88■□□□□ 0.13
TM6SF1-201ENST00000258909 CCNB2O95067 398 aa15.88■□□□□ 0.13
TM6SF1-201ENST00000258909 SOX14O95416 240 aa15.88■□□□□ 0.13
TM6SF1-201ENST00000258909 IRF2P14316 349 aa15.88■□□□□ 0.13
TM6SF1-201ENST00000258909 GATA4P43694 442 aa15.88■□□□□ 0.13
TM6SF1-201ENST00000258909 OR8G1Q15617 311 aa15.88■□□□□ 0.13
TM6SF1-201ENST00000258909 TUSC1Q2TAM9 212 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms