RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 B3GALT1Q9Y5Z6 326 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 CACNA1EQ15878 2313 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 HEATR5AQ86XA9 2040 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 MPDZO75970 2070 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 DENND4CQ5VZ89 1909 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 CCDC163A0A0D9SF12 145 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 TRBV5-5A0A0J9YX44 114 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 BLACEA4D250 179 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 TUBAL3A6NHL2 446 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 SULT2B1O00204 365 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 EIF4E2O60573 245 aaKnown RBP4.25□□□□□ -1.73
USP44-201ENST00000258499 ADAP1O75689 374 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 B3GALNT1O75752 331 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 WDPCPO95876 746 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 IGHG1P01857 330 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 PSMB6P28072 239 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 AKR1C3P42330 323 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 PPT1P50897 306 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 PRSS12P56730 875 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 EIF5AP63241 154 aaKnown RBP4.25□□□□□ -1.73
USP44-201ENST00000258499 CYCSP99999 105 aaKnown RBP4.25□□□□□ -1.73
USP44-201ENST00000258499 RBM39Q14498 530 aaKnown RBP4.25□□□□□ -1.73
USP44-201ENST00000258499 PAN3Q58A45 887 aaKnown RBP4.25□□□□□ -1.73
USP44-201ENST00000258499 KRBOX4Q5JUW0 171 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 RGS7BPQ6MZT1 257 aaPredicted RBP4.25□□□□□ -1.73
USP44-201ENST00000258499 ATRAIDQ6UW56 229 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 FAM122BQ7Z309 247 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 LYG2Q86SG7 212 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 NKAIN3Q8N8D7 197 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 TMEM229BQ8NBD8 167 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 GPX8Q8TED1 209 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 HOXB13Q92826 284 aaPredicted RBP4.25□□□□□ -1.73
USP44-201ENST00000258499 EIF5A2Q9GZV4 153 aaKnown RBP4.25□□□□□ -1.73
USP44-201ENST00000258499 SLC25A32Q9H2D1 315 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 GPR84Q9NQS5 396 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 PLEKHJ1Q9NW61 149 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 PLEK2Q9NYT0 353 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 KLHL13Q9P2N7 655 aa4.25□□□□□ -1.73
USP44-201ENST00000258499 FAM230AA0A1W2PPH8 454 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 BCL2L11O43521 198 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 OR2A4O95047 310 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 F12P00748 615 aaPredicted RBP4.24□□□□□ -1.73
USP44-201ENST00000258499 HOXC4P09017 264 aaPredicted RBP4.24□□□□□ -1.73
USP44-201ENST00000258499 NAT1P18440 290 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 C17orf67Q0P5P2 114 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 FOXF1Q12946 379 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 ISXQ2M1V0 245 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 SPIN3Q5JUX0 258 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 TMEM200AQ86VY9 491 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 NAXDQ8IW45 347 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 OR5M8Q8NGP6 311 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 LHFPL5Q8TAF8 219 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 STT3BQ8TCJ2 826 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 SCARF2Q96GP6 870 aaPredicted RBP4.24□□□□□ -1.73
USP44-201ENST00000258499 OR2A7Q96R45 310 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 CCNL2Q96S94 520 aaPredicted RBP4.24□□□□□ -1.73
USP44-201ENST00000258499 GAS2L1Q99501 681 aaPredicted RBP4.24□□□□□ -1.73
USP44-201ENST00000258499 RTN4RQ9BZR6 473 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 FOXQ1Q9C009 403 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 VN1R1Q9GZP7 353 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 PBOV1Q9GZY1 135 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 ZNF700Q9H0M5 742 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 DNTTIP1Q9H147 329 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 PIGMQ9H3S5 423 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 MRPL22Q9NWU5 206 aaKnown RBP4.24□□□□□ -1.73
USP44-201ENST00000258499 GDF2Q9UK05 429 aaPredicted RBP4.24□□□□□ -1.73
USP44-201ENST00000258499 KCNMB2Q9Y691 235 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 TRIOBPQ9H2D6 2365 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 ZDBF2Q9HCK1 2354 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 CDH23Q9H251 3354 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.24□□□□□ -1.73
USP44-201ENST00000258499 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.24□□□□□ -1.73
USP44-201ENST00000258499 OR2M5A3KFT3 312 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 MFSD2BA6NFX1 497 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 EPOPA6NHQ4 379 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 CCDC85CA6NKD9 419 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 TMEM200CA6NKL6 621 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 FAM74A7A6NL05 159 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 NPIPA2E9PIF3 369 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 NPIPB9F8W1W9 429 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 NPIPA3F8WFD2 350 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 STMND1H3BQB6 276 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 PLPP3O14495 311 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 RER1O15258 196 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 AQP8O94778 261 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 IGHV4-34P06331 123 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 HOXD4P09016 255 aaPredicted RBP4.24□□□□□ -1.73
USP44-201ENST00000258499 PET100P0DJ07 73 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 FOLR1P15328 257 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 RPA2P15927 270 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 RAB6AP20340 208 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 ADH6P28332 368 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 CSF2RBP32927 897 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 CLDN17P56750 224 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 TAS2R31P59538 309 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 RPS4XP62701 263 aaKnown RBP4.24□□□□□ -1.73
USP44-201ENST00000258499 GABREP78334 506 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 IAH1Q2TAA2 248 aaPredicted RBP4.24□□□□□ -1.73
USP44-201ENST00000258499 FAM74A3Q4VXF1 159 aa4.24□□□□□ -1.73
USP44-201ENST00000258499 EXOSC6Q5RKV6 272 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms